Plant Circular RNA Database

Detail information of Zm00001d019907_circ_g.9

			
						 General Information
					
						CircRNA Name
						Zm00001d019907_circ_g.9
					
						ID in PlantcircBase
						zma_circ_009291
					
						Alias
						zma_circ_0002744
					
						Organism
						
							Zea mays						
					
						Position
						
							chr7: 74653413-74657842  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							Zm00001d019907						
					
						Parent gene annotation
						
							Histone-lysine N-methyltransferase ATX2
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Zm00001d019907_circ_g.10 						
					
						Support reads
						NA
					
						Tissues
						leaf, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d019907_T024:7
Zm00001d019907_T019:8
Zm00001d019907_T042:8
Zm00001d019907_T025:7
Zm00001d019907_T006:7
Zm00001d019907_T016:8
Zm00001d019907_T034:8
Zm00001d019907_T036:7
Zm00001d019907_T029:7
Zm00001d019907_T001:7
Zm00001d019907_T020:8
Zm00001d019907_T047:8
Zm00001d019907_T043:8
Zm00001d019907_T028:7
Zm00001d019907_T015:6
Zm00001d019907_T035:8
Zm00001d019907_T012:7
Zm00001d019907_T032:6
Zm00001d019907_T044:8
Zm00001d019907_T018:8
Zm00001d019907_T002:7
Zm00001d019907_T041:8
Zm00001d019907_T009:7
Zm00001d019907_T003:8
Zm00001d019907_T005:6
Zm00001d019907_T031:7
Zm00001d019907_T004:8
Zm00001d019907_T022:8
Zm00001d019907_T046:7
Zm00001d019907_T039:7
Zm00001d019907_T013:4

General Information
CircRNA Name	Zm00001d019907_circ_g.9
ID in PlantcircBase	zma_circ_009291
Alias	zma_circ_0002744
Organism	Zea mays
Position	chr7: 74653413-74657842 JBrowse»
Reference genome	AGPv4.38
Type	ue-circRNA
Identification method	find_circ
Parent gene	Zm00001d019907
Parent gene annotation	Histone-lysine N-methyltransferase ATX2
Parent gene strand	-
Alternative splicing	Zm00001d019907_circ_g.10
Support reads	NA
Tissues	leaf, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d019907_T024:7 Zm00001d019907_T019:8 Zm00001d019907_T042:8 Zm00001d019907_T025:7 Zm00001d019907_T006:7 Zm00001d019907_T016:8 Zm00001d019907_T034:8 Zm00001d019907_T036:7 Zm00001d019907_T029:7 Zm00001d019907_T001:7 Zm00001d019907_T020:8 Zm00001d019907_T047:8 Zm00001d019907_T043:8 Zm00001d019907_T028:7 Zm00001d019907_T015:6 Zm00001d019907_T035:8 Zm00001d019907_T012:7 Zm00001d019907_T032:6 Zm00001d019907_T044:8 Zm00001d019907_T018:8 Zm00001d019907_T002:7 Zm00001d019907_T041:8 Zm00001d019907_T009:7 Zm00001d019907_T003:8 Zm00001d019907_T005:6 Zm00001d019907_T031:7 Zm00001d019907_T004:8 Zm00001d019907_T022:8 Zm00001d019907_T046:7 Zm00001d019907_T039:7 Zm00001d019907_T013:4

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GTTTCAGATTCAAAGACTTCATCTCTTCAGAGGAGATGAAAAACTTTATCCTTTCATCTGCAAG
GCTAAGGTCCTCTGCTTCACCATCATCATACTTTACctgaataagttgtcttatctgcggattt
gaaaagccaaacatgtaggaaccagaactttggcatacgtttctttccaattcagtgcactgtt
tttccttt

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CTGAATAAGTTGTCTTATCTGCGGATTTGAAAAGCCAAACATGTAGGAACCAGAACTTTGGCAT
ACGTTTCTTTCCAATTCAGTGCACTGTTTTTCCTTTATTCTGCGGTATATCTCTTTCCAGCACG
CATTTGGGGTAGATCCATCAATCTAAACATCATATAGGCTCAACATTAGGGAAATGTACATATT
TGGAACTACAAAGTTTGTCACAAAGCTGTTATATCCACGGCATACAAAATAATTTTGGTCATAA
TCATCAAAATCTGGTCTTTCCATAAAAATGACAATGTAATTATTTATAAAAAACATAAATGTTA
CTCAATGGCAGAAATAGACTTCCACCAGAGAAATAGAAATATGTTAAATAAAGAGTTTGACTAA
AGTTTAACTTGGCGTTCGTAATGCAGTTAGAAAATGGTTAAGACACTGTCAAGCTGAATTCATA
ACCATTTTTCAACCCCATGTATCAAAATGATTTTATACATTTTTCTACTTTTTCATCTAAACTG
ATAACTAAAAACAGACATACTAAATGGAGTAAAACATAAAATATAGATCTTAGTCAAGGTTTAA
CTTGCTATTTATATTTATAAAAAATAAAACTAAGCTATTTTCTTAAGCAATATCATGAGAAACA
GACATTCAAGTGAAGTGCCTTAACTGTACCCGATATGTTAGTATTTATAGATACGATTTAATAG
GCAATCCAGAGCCTAAATATCAAGAACAGCTTTAATCATCCAATTTGACATACCATTATTGAAA
ATGAAAACAGCGTCAGAAAAAGTTTCTATATGGCACTCTCTACATAAAAATTAAAATCAGATCA
GCTCATCAAAGTGTTTATGCACATTCCTAAAAGAATATACAGGTTAAATGGCATTGATGCCACC
ATGATAACGGAACTAATATAGAGACATGAAGGAGCAGCTAAACAATGGAGCTTAAAATACATTA
GTCACAACAGCAAGACTACAATATCTTATGCATACTTTTTTCTCGAACAATATCTTAGGAATAA
AGACACTAGATTTCTATAGATGTATCTGCAATTGTAAAACAATAGTATATATAGATTATCATCA
GCCTATTATTCATAAGCATCTCTAATACCCAAAAAACTTTAGCTAGTAAAAAACAAACCAATTA
GTTTGCTATACGGGTAAACTCCCAGTCCTCAATGATGCCAATACTTTGGATTACAGGACATTTC
ATGTTCGGTACATGTCTATGCAACACATGACACTCTAGTTCTTTTTCAAAACTATCTCCATAGT
TTTACTAACAAGAACAGCATCTACAAGACAAGGTTATTCATTTAATTACCTGCACCCCGTCTTC
TGAGATCACCCTAAACAACGGGCGTGCTTTTGTATCAGAGTTCCTAAGTACTTCCATTTTGTAC
AATGTTACTGCATGTGGGTCTGCAATAACATTTTGATATATAAATAAAAAAAATGCATAATCTG
ATGAGTATAAAAGTTTCAAAATGGGTTAATAAATGCTGCAGACGGTTTTAGACAAGTTTGAAAG
ATGATTACCTTCTATTGACATGTACTTTCTGAAAGCAGTATATCCTTCAGGCCATATATCCTTT
TTGTTATGGAAATGGTCAGAGTCAGATACTATCCTACCTGGAAAAAGCTCACAAAACAGAAGTT
GGTCATACAGCAAAAGGAAGGATTAGACAGTAAATTAATAAATTGGGATAAAAATGTTAACATG
AAAAGGTTAAATATCGCACAACATTATAACCTATCACTAAGTTCAAGTTATGGTAAGCAAACAA
AATTATTCACTCAAGTGCTTTTGTTACATAAGTAAAGCTCATGCAAGGTAAGAGTGGACTGCAA
AGTGAATAGCCAGAGTGAAGTGACAATAAAACGTTCCAAAAAGAACTAAAAGGTAAGGAAGAGC
AAAAGACATTTAAATATATACTACACCTACAACTCTACAAGTATATTCCTCAACCAACCTGTGT
CAGCAATAGGAACTGTATAGAAGGTAGGTGCCAGTAAAAATTAACTAAAAGGGTTCCAGTGATG
CCTACTCAATGTTTATACGCAGATATATCTTTGCATGTGCTAGGACACTTGGGCAACATTTAGT
CACTCCTGGTGGTCCAAGTCTCAACAGAACGGATATATAGCATATCCAGTATCCCATAAATATG
TTTGGTATGCAGTATCCACTATGGAGAACCAATTTTTTCTTGTTCTCAGAAAATAAAATATTTC
GACCTTACTGGCCATTAAACACATTTGAACAAATTGATATTAAATTTTGCATGACAGGATATAA
TATGAATAACCAAGATTCACAATGGCCGGAGATGCAAACACTAATTGATCTGTGCAATCAAGGA
ACTGATGAGGGTCGTAGGGCAGCCTTTTTTGTACCATGTATCTTGGGGTCCTTTTGGACCTTTA
TCTCCTTCTTAATATATTTTCGCGCAGCTCTCTTGCGCTTTCGAGAAAAAAAAGGAACTGATGA
GGGTGTCACAATTGCGGACGAATTTAAATTTTGCATCATATAACAAATCAAACAGAATGGGATT
GGATAACATGCTCTATGACTTTTTTAGCTCAATTTTCAATATGAGGTACATAATTACATAAATA
ACTCGGCTATTACCATTTCCATCTGCTATATTGACGATGTCATAAACAAAACTATTTGAAAGTG
GAATTTCAATGGACACCATGGGCCTGATTGATTGATGGCCAAAATTTGATTGCCAAAACTTAGG
CAAACCAAGATTTTGGCAGCCATTTGGTTTGCTATTAGCCATCAACTCTAATTGCCATACCAAA
TCTATGTCAAATATTTTTGCCTAAGTTTTGACAACTTTTTCTTGCCAAATCTTTGACATCGCAA
ATTTTGGTAGCCAACCAAGCAGGCCCTATGTTTTAAAAAAACAATCACAATGTATGCAGGAACA
GAAATAGAAAAGGTACTACATTCTATGTTTGAACACATACCTAAATTGCTCACACGAAGGTTCC
CTAGTTCTATTTGAGTCATCTCAGCATCCTCTCCATTTTGCAATGCTAGAGCTTCTGATAAATT
ACTGCAAGAGTCTACCTTGCCCTCATAGGAATTAACATCAGAGACATCATGTTGAACAGATTTC
CGAAGCTGCAACATAATTTCAGGAAGCTGCTGTGTGTGGAGAAATCTACAGAACAAAAAAGTTA
AATGGTCACAACAAAAAAGTATCAGACAGGATAAAAGAACAACGTCGAGATCCATCTATGTGCT
CTGCTCCCAAGAAAACTTGAAAGATGATTTCCTTTTGTAAGTCGATTAGGGATACATACTCTTT
TGCTTCTTCTAAGCTCCGACTGAAACTTGCTTGCTTGCATTTGAGATGCAAAGAAGAAACAAGA
CCATTCAGAAACGGCACAGCTTGCTTCAATTTAATCCTGAGGATAATTCACAATGGGTAGTTCC
AAGAAAAAGAAGTTAAATGATGTCAGAATTGAATATAAAGGACCAACCTTGCAAAATCGTGAGT
GCCAAAGAATTGGACCAATATTGATTGGTCCAACCGAATTGACTTCAAAGCTCGAGTTGCAGGT
ACATTTGACTCATCCACCACAACCGCCGGCCACATTGCATGACCTGTTCAAGCACACCAGGCCA
CATTTGAGAAGACCAAATAATTTTGGGTGACTGAGAAAGCCAGCACACCACTAACCAATAAAAA
ATGGAAATTGCCACAGATGAAACAAAATAAATCAATAGATCAAAGATCATGAATGTAAGCCCTT
GAGAAAGGCAAGTGCGTACACATGAGTCCATAATTCAAAAGGAAGGGAAACTATGAGGTAAGTC
GAGAATAAAACTCCAATTTAAAGTAGAAAGTGACCAAGACAATAACATTTCAGGAAATCAAAAA
ATACCCTAAAAGGCAAAGCTATGAAGGCCATACAGAATACTCTAATTGAAAACATTTTCTATGA
AAGACTCAGTGAAATCATCTAGCACATGTCATGGAGCTCAAAAGACAACTGTGTTGGGAATATA
ATTAAAAATCACCCAACACCAGATATGTGAAGCACCACACAACTGTATCCTGGTATATTTGAAT
AGAATTGAAGTTTTGACGGAATGATACCTAAGACAAACTAAAAAGCATCACCATTGAATTCAAG
TTAATTAGATGATAACACCAATGTTCAGCAATAGAGAACTCAAGTGTCCAGACTACCTGTAATT
TTTGCCCACACAAGGTCACCTGGGTCGAGACCCTGATAGTCATGAAAGCTAACAGCAAGTGCAA
GCAACTCATCATGCCCCTTCTTATCCTGATTGGAAATTCCAAGTTTCAGATTCAAAGACTTCAT
CTCTTCAGAGGAGATGAAAAACTTTATCCTTTCATCTGCAAGGCTAAGGTCCTCTGCTTCACCA
TCATCATACTTTAC
						
					

			
		

Sequences
Splice junction sequence	GTTTCAGATTCAAAGACTTCATCTCTTCAGAGGAGATGAAAAACTTTATCCTTTCATCTGCAAG GCTAAGGTCCTCTGCTTCACCATCATCATACTTTACctgaataagttgtcttatctgcggattt gaaaagccaaacatgtaggaaccagaactttggcatacgtttctttccaattcagtgcactgtt tttccttt
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CTGAATAAGTTGTCTTATCTGCGGATTTGAAAAGCCAAACATGTAGGAACCAGAACTTTGGCAT ACGTTTCTTTCCAATTCAGTGCACTGTTTTTCCTTTATTCTGCGGTATATCTCTTTCCAGCACG CATTTGGGGTAGATCCATCAATCTAAACATCATATAGGCTCAACATTAGGGAAATGTACATATT TGGAACTACAAAGTTTGTCACAAAGCTGTTATATCCACGGCATACAAAATAATTTTGGTCATAA TCATCAAAATCTGGTCTTTCCATAAAAATGACAATGTAATTATTTATAAAAAACATAAATGTTA CTCAATGGCAGAAATAGACTTCCACCAGAGAAATAGAAATATGTTAAATAAAGAGTTTGACTAA AGTTTAACTTGGCGTTCGTAATGCAGTTAGAAAATGGTTAAGACACTGTCAAGCTGAATTCATA ACCATTTTTCAACCCCATGTATCAAAATGATTTTATACATTTTTCTACTTTTTCATCTAAACTG ATAACTAAAAACAGACATACTAAATGGAGTAAAACATAAAATATAGATCTTAGTCAAGGTTTAA CTTGCTATTTATATTTATAAAAAATAAAACTAAGCTATTTTCTTAAGCAATATCATGAGAAACA GACATTCAAGTGAAGTGCCTTAACTGTACCCGATATGTTAGTATTTATAGATACGATTTAATAG GCAATCCAGAGCCTAAATATCAAGAACAGCTTTAATCATCCAATTTGACATACCATTATTGAAA ATGAAAACAGCGTCAGAAAAAGTTTCTATATGGCACTCTCTACATAAAAATTAAAATCAGATCA GCTCATCAAAGTGTTTATGCACATTCCTAAAAGAATATACAGGTTAAATGGCATTGATGCCACC ATGATAACGGAACTAATATAGAGACATGAAGGAGCAGCTAAACAATGGAGCTTAAAATACATTA GTCACAACAGCAAGACTACAATATCTTATGCATACTTTTTTCTCGAACAATATCTTAGGAATAA AGACACTAGATTTCTATAGATGTATCTGCAATTGTAAAACAATAGTATATATAGATTATCATCA GCCTATTATTCATAAGCATCTCTAATACCCAAAAAACTTTAGCTAGTAAAAAACAAACCAATTA GTTTGCTATACGGGTAAACTCCCAGTCCTCAATGATGCCAATACTTTGGATTACAGGACATTTC ATGTTCGGTACATGTCTATGCAACACATGACACTCTAGTTCTTTTTCAAAACTATCTCCATAGT TTTACTAACAAGAACAGCATCTACAAGACAAGGTTATTCATTTAATTACCTGCACCCCGTCTTC TGAGATCACCCTAAACAACGGGCGTGCTTTTGTATCAGAGTTCCTAAGTACTTCCATTTTGTAC AATGTTACTGCATGTGGGTCTGCAATAACATTTTGATATATAAATAAAAAAAATGCATAATCTG ATGAGTATAAAAGTTTCAAAATGGGTTAATAAATGCTGCAGACGGTTTTAGACAAGTTTGAAAG ATGATTACCTTCTATTGACATGTACTTTCTGAAAGCAGTATATCCTTCAGGCCATATATCCTTT TTGTTATGGAAATGGTCAGAGTCAGATACTATCCTACCTGGAAAAAGCTCACAAAACAGAAGTT GGTCATACAGCAAAAGGAAGGATTAGACAGTAAATTAATAAATTGGGATAAAAATGTTAACATG AAAAGGTTAAATATCGCACAACATTATAACCTATCACTAAGTTCAAGTTATGGTAAGCAAACAA AATTATTCACTCAAGTGCTTTTGTTACATAAGTAAAGCTCATGCAAGGTAAGAGTGGACTGCAA AGTGAATAGCCAGAGTGAAGTGACAATAAAACGTTCCAAAAAGAACTAAAAGGTAAGGAAGAGC AAAAGACATTTAAATATATACTACACCTACAACTCTACAAGTATATTCCTCAACCAACCTGTGT CAGCAATAGGAACTGTATAGAAGGTAGGTGCCAGTAAAAATTAACTAAAAGGGTTCCAGTGATG CCTACTCAATGTTTATACGCAGATATATCTTTGCATGTGCTAGGACACTTGGGCAACATTTAGT CACTCCTGGTGGTCCAAGTCTCAACAGAACGGATATATAGCATATCCAGTATCCCATAAATATG TTTGGTATGCAGTATCCACTATGGAGAACCAATTTTTTCTTGTTCTCAGAAAATAAAATATTTC GACCTTACTGGCCATTAAACACATTTGAACAAATTGATATTAAATTTTGCATGACAGGATATAA TATGAATAACCAAGATTCACAATGGCCGGAGATGCAAACACTAATTGATCTGTGCAATCAAGGA ACTGATGAGGGTCGTAGGGCAGCCTTTTTTGTACCATGTATCTTGGGGTCCTTTTGGACCTTTA TCTCCTTCTTAATATATTTTCGCGCAGCTCTCTTGCGCTTTCGAGAAAAAAAAGGAACTGATGA GGGTGTCACAATTGCGGACGAATTTAAATTTTGCATCATATAACAAATCAAACAGAATGGGATT GGATAACATGCTCTATGACTTTTTTAGCTCAATTTTCAATATGAGGTACATAATTACATAAATA ACTCGGCTATTACCATTTCCATCTGCTATATTGACGATGTCATAAACAAAACTATTTGAAAGTG GAATTTCAATGGACACCATGGGCCTGATTGATTGATGGCCAAAATTTGATTGCCAAAACTTAGG CAAACCAAGATTTTGGCAGCCATTTGGTTTGCTATTAGCCATCAACTCTAATTGCCATACCAAA TCTATGTCAAATATTTTTGCCTAAGTTTTGACAACTTTTTCTTGCCAAATCTTTGACATCGCAA ATTTTGGTAGCCAACCAAGCAGGCCCTATGTTTTAAAAAAACAATCACAATGTATGCAGGAACA GAAATAGAAAAGGTACTACATTCTATGTTTGAACACATACCTAAATTGCTCACACGAAGGTTCC CTAGTTCTATTTGAGTCATCTCAGCATCCTCTCCATTTTGCAATGCTAGAGCTTCTGATAAATT ACTGCAAGAGTCTACCTTGCCCTCATAGGAATTAACATCAGAGACATCATGTTGAACAGATTTC CGAAGCTGCAACATAATTTCAGGAAGCTGCTGTGTGTGGAGAAATCTACAGAACAAAAAAGTTA AATGGTCACAACAAAAAAGTATCAGACAGGATAAAAGAACAACGTCGAGATCCATCTATGTGCT CTGCTCCCAAGAAAACTTGAAAGATGATTTCCTTTTGTAAGTCGATTAGGGATACATACTCTTT TGCTTCTTCTAAGCTCCGACTGAAACTTGCTTGCTTGCATTTGAGATGCAAAGAAGAAACAAGA CCATTCAGAAACGGCACAGCTTGCTTCAATTTAATCCTGAGGATAATTCACAATGGGTAGTTCC AAGAAAAAGAAGTTAAATGATGTCAGAATTGAATATAAAGGACCAACCTTGCAAAATCGTGAGT GCCAAAGAATTGGACCAATATTGATTGGTCCAACCGAATTGACTTCAAAGCTCGAGTTGCAGGT ACATTTGACTCATCCACCACAACCGCCGGCCACATTGCATGACCTGTTCAAGCACACCAGGCCA CATTTGAGAAGACCAAATAATTTTGGGTGACTGAGAAAGCCAGCACACCACTAACCAATAAAAA ATGGAAATTGCCACAGATGAAACAAAATAAATCAATAGATCAAAGATCATGAATGTAAGCCCTT GAGAAAGGCAAGTGCGTACACATGAGTCCATAATTCAAAAGGAAGGGAAACTATGAGGTAAGTC GAGAATAAAACTCCAATTTAAAGTAGAAAGTGACCAAGACAATAACATTTCAGGAAATCAAAAA ATACCCTAAAAGGCAAAGCTATGAAGGCCATACAGAATACTCTAATTGAAAACATTTTCTATGA AAGACTCAGTGAAATCATCTAGCACATGTCATGGAGCTCAAAAGACAACTGTGTTGGGAATATA ATTAAAAATCACCCAACACCAGATATGTGAAGCACCACACAACTGTATCCTGGTATATTTGAAT AGAATTGAAGTTTTGACGGAATGATACCTAAGACAAACTAAAAAGCATCACCATTGAATTCAAG TTAATTAGATGATAACACCAATGTTCAGCAATAGAGAACTCAAGTGTCCAGACTACCTGTAATT TTTGCCCACACAAGGTCACCTGGGTCGAGACCCTGATAGTCATGAAAGCTAACAGCAAGTGCAA GCAACTCATCATGCCCCTTCTTATCCTGATTGGAAATTCCAAGTTTCAGATTCAAAGACTTCAT CTCTTCAGAGGAGATGAAAAACTTTATCCTTTCATCTGCAAGGCTAAGGTCCTCTGCTTCACCA TCATCATACTTTAC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.099612735

Conservation Information
Conserved circRNAs	NA
PMCS	0.099612735

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							74657036-74653439(+)
74657779-74653413(+)
74657766-74653415(-)
74653478-74657834(-)
						
					

						Potential amino acid sequence
						
							MTCNFCPHKVTWVETLIVMKANSKCKQLIMPLLILIGNSKFQIQRLHLFRGDEKLYPFICKAKV
LCFTIIILYLNKLSYLRI*(+)
MKNFILSSARLRSSASPSSYFT*(+)
MKSLNLKLGISNQDKKGHDELLALAVSFHDYQGLDPGDLVWAKITGHAMWPAVVVDESNVPATR
ALKSIRLDQSILVQFFGTHDFARIKLKQAVPFLNGLVSSLHLKCKQASFSRSLEEAKEFLHTQQ
LPEIMLQLRKSVQHDVSDVNSYEGKVDSCSNLSEALALQNGEDAEMTQIELGNLRVSNLGMPMV
SIEIPLSNSFVYDIVNIADGNGRIVSDSDHFHNKKDIWPEGYTAFRKYMSIEDPHAVTLYKMEV
LRNSDTKARPLFRVISEDGVQIDGSTPNACWKEIYRRIKEKQCTELERNVCQSSGSYMFGFSNP
QIRQLIQVKYDDGEAEDLSLADERIKFFISSEEMKSLNLKLGISNQDKKGHDELLALAVSFHDY
QGLDPGDLVWAKITGHAMWPAVVVDESNVPATRALKSIRLDQSILVQFFGTHDFARIKLKQAVP
FLNGLVSSLHLKCKQASFSRSLEEAKEFLHTQQLPEIMLQLRKSVQHDVSDVNSYEGKVDSCSN
LSEALALQNGEDAEMTQIELGNLRVSNLGMPMVSIEIPLSNSFVYDIVNIADGNGRIVSDSDHF
HNKKDIWPEGYTAFRKYMSIEDPHAVTLYKMEVLRNSDTKARPLFRVISEDGVQIDGSTPNACW
KEIYRRIKEKQCTELERNVCQSSGSYMFGFSNPQIRQLIQVKYDDGEAEDLSLADERIKFFISS
EEMKSLNLKLGISNQDKKGHDELLALAVSFHDYQGLDPGDLVWAKITGHAMWPAVVVDESNVPA
TRALKSIRLDQSILVQFFGTHDFARIKLKQAVPFLNGLVSSLHLKCKQASFSRSLEEAKEFLHT
QQLPEIMLQLRKSVQHDVSDVNSYEGKVDSCSNLSEALALQNGEDAEMTQIELGNLRVSNLGMP
MVSIEIPLSNSFVYDIVNIADGNGRIVSDSDHFHNKKDIWPEGYTAFRKYMSIEDPHAVTLYKM
EVLRNSDTKARPLFRVISEDGVQIDGSTPNACWKEIYRRIKEKQCTELERNVCQSSGSYMFGFS
NPQIRQLIQVKYDDGEAEDLSLADERIKFFISSEEMKSLNLKLGISNQDKKGHDELLALAVSFH
DYQGLDPGDLVWAKITGHAMWPAVVVDESNVPATRALKSIRLDQSILVQFFGTHDFARIKLKQA
VPFLNGLVSSLHLKCKQASFSRSLEEAKEFLHTQQLPEIMLQLRKSVQHDVSDVNSYEGKVDSC
SNLSEALALQNGEDAEMTQIELGNLRVSNLGMPMVSIEIPLSNSFVYDIVNIADGNGRIVSDSD
HFHNKKDIWPEGYTAFRKYMSIEDPHAVTLYKMEVLRNSDTKARPLFRVISEDGVQIDGSTPNA
CWKEIYRRIKEKQCTELERNVCQSSGSYMFGFSNPQIRQLIQ(-)
MPKFWFLHVWLFKSADKTTYSGKV*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	74657036-74653439(+) 74657779-74653413(+) 74657766-74653415(-) 74653478-74657834(-)
Potential amino acid sequence	MTCNFCPHKVTWVETLIVMKANSKCKQLIMPLLILIGNSKFQIQRLHLFRGDEKLYPFICKAKV LCFTIIILYLNKLSYLRI(+) MKNFILSSARLRSSASPSSYFT(+) MKSLNLKLGISNQDKKGHDELLALAVSFHDYQGLDPGDLVWAKITGHAMWPAVVVDESNVPATR ALKSIRLDQSILVQFFGTHDFARIKLKQAVPFLNGLVSSLHLKCKQASFSRSLEEAKEFLHTQQ LPEIMLQLRKSVQHDVSDVNSYEGKVDSCSNLSEALALQNGEDAEMTQIELGNLRVSNLGMPMV SIEIPLSNSFVYDIVNIADGNGRIVSDSDHFHNKKDIWPEGYTAFRKYMSIEDPHAVTLYKMEV LRNSDTKARPLFRVISEDGVQIDGSTPNACWKEIYRRIKEKQCTELERNVCQSSGSYMFGFSNP QIRQLIQVKYDDGEAEDLSLADERIKFFISSEEMKSLNLKLGISNQDKKGHDELLALAVSFHDY QGLDPGDLVWAKITGHAMWPAVVVDESNVPATRALKSIRLDQSILVQFFGTHDFARIKLKQAVP FLNGLVSSLHLKCKQASFSRSLEEAKEFLHTQQLPEIMLQLRKSVQHDVSDVNSYEGKVDSCSN LSEALALQNGEDAEMTQIELGNLRVSNLGMPMVSIEIPLSNSFVYDIVNIADGNGRIVSDSDHF HNKKDIWPEGYTAFRKYMSIEDPHAVTLYKMEVLRNSDTKARPLFRVISEDGVQIDGSTPNACW KEIYRRIKEKQCTELERNVCQSSGSYMFGFSNPQIRQLIQVKYDDGEAEDLSLADERIKFFISS EEMKSLNLKLGISNQDKKGHDELLALAVSFHDYQGLDPGDLVWAKITGHAMWPAVVVDESNVPA TRALKSIRLDQSILVQFFGTHDFARIKLKQAVPFLNGLVSSLHLKCKQASFSRSLEEAKEFLHT QQLPEIMLQLRKSVQHDVSDVNSYEGKVDSCSNLSEALALQNGEDAEMTQIELGNLRVSNLGMP MVSIEIPLSNSFVYDIVNIADGNGRIVSDSDHFHNKKDIWPEGYTAFRKYMSIEDPHAVTLYKM EVLRNSDTKARPLFRVISEDGVQIDGSTPNACWKEIYRRIKEKQCTELERNVCQSSGSYMFGFS NPQIRQLIQVKYDDGEAEDLSLADERIKFFISSEEMKSLNLKLGISNQDKKGHDELLALAVSFH DYQGLDPGDLVWAKITGHAMWPAVVVDESNVPATRALKSIRLDQSILVQFFGTHDFARIKLKQA VPFLNGLVSSLHLKCKQASFSRSLEEAKEFLHTQQLPEIMLQLRKSVQHDVSDVNSYEGKVDSC SNLSEALALQNGEDAEMTQIELGNLRVSNLGMPMVSIEIPLSNSFVYDIVNIADGNGRIVSDSD HFHNKKDIWPEGYTAFRKYMSIEDPHAVTLYKMEVLRNSDTKARPLFRVISEDGVQIDGSTPNA CWKEIYRRIKEKQCTELERNVCQSSGSYMFGFSNPQIRQLIQ(-) MPKFWFLHVWLFKSADKTTYSGKV*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ma et al., 2021b

circRNA

Detail information of Zm00001d019907_circ_g.9

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