Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | Os04g0441900_circ_g.1 |
ID in PlantcircBase | osa_circ_023931 |
Alias | Os04circ05861 |
Organism | Oryza sativa |
Position | chr4: 21990638-21992247 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | e-circRNA |
Identification method | SMALT, Segemehl |
Parent gene | Os04g0441900 |
Parent gene annotation |
Cleft lip and palate transmembrane 1 family protein. (Os04t04419 00-01);Similar to transmembrane CLPTM1 family protein. (Os04t044 1900-02);Similar to predicted protein. (Os04t0441900-03) |
Parent gene strand | - |
Alternative splicing | NA |
Support reads | 3 |
Tissues | panicle |
Exon boundary | No-Yes |
Splicing signals | CT-AC |
Number of exons covered | Os04t0441900-01:4 Os04t0441900-03:4 Os04t0441900-02:4 |
Conservation Information | |
---|---|
Conserved circRNAs | osi_circ_005482* osi_circ_014396 |
PMCS | 0.244008799 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Lu et al., 2015 |