Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d011742_circ_g.1 |
ID in PlantcircBase | zma_circ_002838 |
Alias | circ1332 |
Organism | Zea mays |
Position | chr8: 160450099-160451807 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | CIRI |
Parent gene | Zm00001d011742 |
Parent gene annotation |
SUPPRESSOR OF ABI3-5 |
Parent gene strand | - |
Alternative splicing | Zm00001d011742_circ_g.2 |
Support reads | 2 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | Zm00001d011742_T036:3 Zm00001d011742_T019:3 Zm00001d011742_T010:3 Zm00001d011742_T005:3 Zm00001d011742_T048:3 Zm00001d011742_T050:3 Zm00001d011742_T038:3 Zm00001d011742_T030:3 Zm00001d011742_T028:3 Zm00001d011742_T002:3 Zm00001d011742_T016:2 Zm00001d011742_T015:2 Zm00001d011742_T032:3 Zm00001d011742_T049:2 Zm00001d011742_T045:3 Zm00001d011742_T041:3 Zm00001d011742_T047:3 Zm00001d011742_T042:3 Zm00001d011742_T001:3 Zm00001d011742_T006:3 Zm00001d011742_T022:3 Zm00001d011742_T013:3 Zm00001d011742_T034:3 Zm00001d011742_T011:3 Zm00001d011742_T008:2 Zm00001d011742_T027:3 Zm00001d011742_T037:3 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.008094402 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |