Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d028325_circ_g.2 |
ID in PlantcircBase | zma_circ_000575 |
Alias | circ2508 |
Organism | Zea mays |
Position | chr1: 30798891-30799219 JBrowse» |
Reference genome | AGPv4.38 |
Type | ei-circRNA |
Identification method | CIRCexplor2 |
Parent gene | Zm00001d028325 |
Parent gene annotation |
brassinosteroid synthesis1 |
Parent gene strand | - |
Alternative splicing | Zm00001d028325_circ_g.1 |
Support reads | 2 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | Zm00001d028325_T002:1 Zm00001d028325_T001:1 Zm00001d028325_T005:1 Zm00001d028325_T006:1 Zm00001d028325_T004:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.404236727 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |