Detailed infomation of each circRNA
| General Information | |
|---|---|
| CircRNA Name | Os09g0533600_circ_g.2 |
| ID in PlantcircBase | osa_circ_040005 |
| Alias | Os09circ09954 |
| Organism | Oryza sativa |
| Position | chr9: 20962582-20967388 JBrowse» |
| Reference genome | IRGSP-1.0.38 |
| Type | e-circRNA |
| Identification method | SMALT, Segemehl |
| Parent gene | Os09g0533600 |
| Parent gene annotation |
Similar to Avr9/Cf-9 induced kinase 1. (Os09t0533600-01) |
| Parent gene strand | - |
| Alternative splicing | Os09g0533600_circ_g.1 Os09g0533600_circ_g.3 |
| Support reads | 6 |
| Tissues | leaf |
| Exon boundary | No-No |
| Splicing signals | CT-AC |
| Number of exons covered | Os09t0533600-01:4 |
| Conservation Information | |
|---|---|
| Conserved circRNAs | NA |
| PMCS | 0.102858422 |
| Functional Information | |
|---|---|
| Coding potential | N |
| Potential coding position |
NA |
| Potential amino acid sequence |
NA |
| Sponge-miRNAs | osa-miR1846b-3p |
| circRNA-miRNA-mRNA network | VISUALIZATION |
| Potential function description | NA |
| Other Information | |
|---|---|
| References | Lu et al., 2015 |