Plant Circular RNA Database

Detail information of Os10g0397200_circ_g.5

			
						 General Information
					
						CircRNA Name
						Os10g0397200_circ_g.5
					
						ID in PlantcircBase
						osa_circ_006736
					
						Alias
						Os10circ03422/Os_ciR495
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr10: 13354505-13356211  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer, CIRI, KNIFE, PcircRNA_finder, SMALT, Segemehl, circRNA_finder, find_circ
					
						Parent gene
						
							Os10g0397200						
					
						Parent gene annotation
						
							Transcription initiation factor TFIIE, beta subunit domain conta
ining protein. (Os10t0397200-01);Similar to predicted protein. (
Os10t0397200-02)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os10g0397200_circ_g.4 Os10g0397200_circ_g.6 						
					
						Support reads
						6/92/96
					
						Tissues
						leaf and panicle/root/shoot, root, seed
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os10t0397200-01:3
Os10t0397200-02:3

General Information
CircRNA Name	Os10g0397200_circ_g.5
ID in PlantcircBase	osa_circ_006736
Alias	Os10circ03422/Os_ciR495
Organism	Oryza sativa
Position	chr10: 13354505-13356211 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer, CIRI, KNIFE, PcircRNA_finder, SMALT, Segemehl, circRNA_finder, find_circ
Parent gene	Os10g0397200
Parent gene annotation	Transcription initiation factor TFIIE, beta subunit domain conta ining protein. (Os10t0397200-01);Similar to predicted protein. ( Os10t0397200-02)
Parent gene strand	-
Alternative splicing	Os10g0397200_circ_g.4 Os10g0397200_circ_g.6
Support reads	6/92/96
Tissues	leaf and panicle/root/shoot, root, seed
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os10t0397200-01:3 Os10t0397200-02:3

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TGTGCTTTGGTTTTGAGGTCGATGCAGCTATGCTGGCCAAAGATGATTGGCACCTCTCTTGCTG
CTGCTTAAATTTGGAGAGGCTATCCTTGAGATCCATctgcaaatcttccattacagttgggtac
gcatccttgacttccaccacagcaagaccctccggatactttcttaccaaaacaagtagttgat
cttttccc

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 152
Transcript exons: 13354505-13354547,13356103-13356211
CTGCAAATCTTCCATTACAGTTGGGTACGCATCCTTGACTTCCGTTGGGCCCTGTGCTTTGGTT
TTGAGGTCGATGCAGCTATGCTGGCCAAAGATGATTGGCACCTCTCTTGCTGCTGCTTAAATTT
GGAGAGGCTATCCTTGAGATCCAT
Transcript length: 164
Transcript exons: 13354505-13354534,13356078-13356211
CTGCAAATCTTCCATTACAGTTGGGTACGCGCTGGAGCGGATGGAGCATTAACCGGTTGGGCCC
TGTGCTTTGGTTTTGAGGTCGATGCAGCTATGCTGGCCAAAGATGATTGGCACCTCTCTTGCTG
CTGCTTAAATTTGGAGAGGCTATCCTTGAGATCCAT
Transcript length: 165
Transcript exons: 13354505-13354585,13356128-13356211
CTGCAAATCTTCCATTACAGTTGGGTACGCATCCTTGACTTCCACCACAGCAAGACCCTCCGGA
TACTTTCTTACCAAAACGGTCGATGCAGCTATGCTGGCCAAAGATGATTGGCACCTCTCTTGCT
GCTGCTTAAATTTGGAGAGGCTATCCTTGAGATCCAT
Transcript length: 178
Transcript exons: 13354505-13354573,13356103-13356211
CTGCAAATCTTCCATTACAGTTGGGTACGCATCCTTGACTTCCACCACAGCAAGACCCTCCGGA
TACTTGTTGGGCCCTGTGCTTTGGTTTTGAGGTCGATGCAGCTATGCTGGCCAAAGATGATTGG
CACCTCTCTTGCTGCTGCTTAAATTTGGAGAGGCTATCCTTGAGATCCAT
Transcript length: 199
Transcript exons: 13354505-13354597,13356106-13356211
CTGCAAATCTTCCATTACAGTTGGGTACGCATCCTTGACTTCCACCACAGCAAGACCCTCCGGA
TACTTTCTTACCAAAACAAGTAGTTGATCGGGCCCTGTGCTTTGGTTTTGAGGTCGATGCAGCT
ATGCTGGCCAAAGATGATTGGCACCTCTCTTGCTGCTGCTTAAATTTGGAGAGGCTATCCTTGA
GATCCAT
Transcript length: 203
Transcript exons: 13354505-13354611,13356116-13356211
CTGCAAATCTTCCATTACAGTTGGGTACGCATCCTTGACTTCCACCACAGCAAGACCCTCCGGA
TACTTTCTTACCAAAACAAGTAGTTGATCTTTTCCCTTCAAATCTTTGGTTTTGAGGTCGATGC
AGCTATGCTGGCCAAAGATGATTGGCACCTCTCTTGCTGCTGCTTAAATTTGGAGAGGCTATCC
TTGAGATCCAT
Transcript length: 213
Transcript exons: 13354505-13354549,13356044-13356211
CTGCAAATCTTCCATTACAGTTGGGTACGCATCCTTGACTTCCACATCATTTGAAAACTTAATA
GGTTGTAGTGGCCTTGCTGGAGCGGATGGAGCATTAACCGGTTGGGCCCTGTGCTTTGGTTTTG
AGGTCGATGCAGCTATGCTGGCCAAAGATGATTGGCACCTCTCTTGCTGCTGCTTAAATTTGGA
GAGGCTATCCTTGAGATCCAT
Transcript length: 225
Transcript exons: 13354505-13354566,13356049-13356211
CTGCAAATCTTCCATTACAGTTGGGTACGCATCCTTGACTTCCACCACAGCAAGACCCTCCGTT
GAAAACTTAATAGGTTGTAGTGGCCTTGCTGGAGCGGATGGAGCATTAACCGGTTGGGCCCTGT
GCTTTGGTTTTGAGGTCGATGCAGCTATGCTGGCCAAAGATGATTGGCACCTCTCTTGCTGCTG
CTTAAATTTGGAGAGGCTATCCTTGAGATCCAT
Transcript length: 238
Transcript exons: 13354505-13354614,13356084-13356211
CTGCAAATCTTCCATTACAGTTGGGTACGCATCCTTGACTTCCACCACAGCAAGACCCTCCGGA
TACTTTCTTACCAAAACAAGTAGTTGATCTTTTCCCTTCAAATCATGCGGATGGAGCATTAACC
GGTTGGGCCCTGTGCTTTGGTTTTGAGGTCGATGCAGCTATGCTGGCCAAAGATGATTGGCACC
TCTCTTGCTGCTGCTTAAATTTGGAGAGGCTATCCTTGAGATCCAT
Transcript length: 263
Transcript exons: 13354505-13354558,13356003-13356211
CTGCAAATCTTCCATTACAGTTGGGTACGCATCCTTGACTTCCACCACAGCAAGGGAGATTTCC
TAACTGAATTGATGTGTTGTAGCCTTTCTGTATCATTTGAAAACTTAATAGGTTGTAGTGGCCT
TGCTGGAGCGGATGGAGCATTAACCGGTTGGGCCCTGTGCTTTGGTTTTGAGGTCGATGCAGCT
ATGCTGGCCAAAGATGATTGGCACCTCTCTTGCTGCTGCTTAAATTTGGAGAGGCTATCCTTGA
GATCCAT
Transcript length: 501
Transcript exons: 13354505-13354621,13355041-13355172,13355960-13356211
CTGCAAATCTTCCATTACAGTTGGGTACGCATCCTTGACTTCCACCACAGCAAGACCCTCCGGA
TACTTTCTTACCAAAACAAGTAGTTGATCTTTTCCCTTCAAATCATGCTTGGACTTGTAAGAGA
AACGTCTCCCATCATAATGTACTTTAGGATTGTTCCTCAGACTGTCAAAGACAGACTTATTCCC
ATGGATATCAACATAAGTTGTTTCATTTATTTGCTCCGCAGTAAAAGCTTGTCTTGTCTTGTAC
AGCAATTCAATGACAAGTTTGATCTGTGCTCCAATAGGAGATTTCCTAACTGAATTGATGTGTT
GTAGCCTTTCTGTATCATTTGAAAACTTAATAGGTTGTAGTGGCCTTGCTGGAGCGGATGGAGC
ATTAACCGGTTGGGCCCTGTGCTTTGGTTTTGAGGTCGATGCAGCTATGCTGGCCAAAGATGAT
TGGCACCTCTCTTGCTGCTGCTTAAATTTGGAGAGGCTATCCTTGAGATCCAT
						
					

						Genomic sequence
						
							CTGCAAATCTTCCATTACAGTTGGGTACGCATCCTTGACTTCCACCACAGCAAGACCCTCCGGA
TACTTTCTTACCAAAACAAGTAGTTGATCTTTTCCCTTCAAATCATGCTTGGACTGCACGTTTA
TCAACAATGATTAACGCGTGAAACCGTAGAAGTAAATCAACTTCAAACAAGATGGGAAGCCTAT
GTAAACTTAAGACTAAACATTTCTGATGTTCTCCCATAAATAATTGTCATCATTATATCATTTT
CCCCGAAACAAGCATTAAAGAAAAACATTTCATTATCAATTACAAATTCCATGGTCATGACAGG
TTTAGCTTGCCACACCAGTGATTAATAGTCGAAATGCAATATGATATTAAGGCATTAAGCAATA
CTTCTGAATTAATTATGTTTAGTGGGGAACATAGGATGAGAGCCATTAATATTATTTCAGGTAG
GAAGGATAGACAATTGGGTAAATATACCAATGAAACAAGTATTGATGTTAGCAAGACTAGTAGT
TACTGGAATAACAAACTTCTTTACCTTGTAAGAGAAACGTCTCCCATCATAATGTACTTTAGGA
TTGTTCCTCAGACTGTCAAAGACAGACTTATTCCCATGGATATCAACATAAGTTGTTTCATTTA
TTTGCTCCGCAGTAAAAGCTTGTCTTGTCTGCAGATTTTGAAGACATCTCAGTTACAACAACAA
TACGCAATACAGCATTGCTATTTATAAGGAAGTTCACAAAACATTTGTTTTGCTATCATTCATG
AAGACATTGGTAAACCATTTTGACAACTATAACTAAAATGCAGAAAATGGACCAGCGCGGAAAT
CATCATAGTGCTCTTTAATACTGTGATTCTATAAATTACATAAGTTACTTTTAACAACTTTTGT
AGCTACAAGTTGTATGGGTTGTCCCTTACAAATTTTCTTCCTGAGCATATAATCCTGGCTGCAC
CACTGTATGCAGCATTAATACAAATTAAATGTGTACTTCACATATTGCTTATAATAGTTATTGT
CAATGCATCCTTGTATCTTTAACCAGATATCAACATGCACATCATTGTTGAACACAGAATAAGC
AGCAAGGCACCAAATTTTGCATATCTGAATTTGCTGGCTGAGTATCTTGCATGCACCAAGGGGT
GTGAAACAATGATAAATAACAGAACAAAGCAAAAGGTAAACGTCTTATGCACTCTCATATAATA
TGTTAACAATTCAGGCTCCATTGATCCAAAAAAAAAAAGAAGTACTAATCAAGGGCATAATATT
CTAATATGGTAACAGATTATACAGAACCATTGGCATTTACTGGCATATAAACTCAATCAACATG
GTGACTTGCAGGATCATTGGAAGACATTACATACCAGAACTGGGGGAACATTCCTGTTTATACT
ATTATGGAAAGGAAAATGAAACAAGGTTGTAGCTTAGTGAGATTTACCTTGTACAGCAATTCAA
TGACAAGTTTGATCTGTGCTCCAATAGGAGATTTCCTAACTGAATTGATGTGTTGTAGCCTTTC
TGTATCATTTGAAAACTTAATAGGTTGTAGTGGCCTTGCTGGAGCGGATGGAGCATTAACCGGT
TGGGCCCTGTGCTTTGGTTTTGAGGTCGATGCAGCTATGCTGGCCAAAGATGATTGGCACCTCT
CTTGCTGCTGCTTAAATTTGGAGAGGCTATCCTTGAGATCCAT
						
					

			
		

Sequences
Splice junction sequence	TGTGCTTTGGTTTTGAGGTCGATGCAGCTATGCTGGCCAAAGATGATTGGCACCTCTCTTGCTG CTGCTTAAATTTGGAGAGGCTATCCTTGAGATCCATctgcaaatcttccattacagttgggtac gcatccttgacttccaccacagcaagaccctccggatactttcttaccaaaacaagtagttgat cttttccc
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 152 Transcript exons: 13354505-13354547,13356103-13356211 CTGCAAATCTTCCATTACAGTTGGGTACGCATCCTTGACTTCCGTTGGGCCCTGTGCTTTGGTT TTGAGGTCGATGCAGCTATGCTGGCCAAAGATGATTGGCACCTCTCTTGCTGCTGCTTAAATTT GGAGAGGCTATCCTTGAGATCCAT Transcript length: 164 Transcript exons: 13354505-13354534,13356078-13356211 CTGCAAATCTTCCATTACAGTTGGGTACGCGCTGGAGCGGATGGAGCATTAACCGGTTGGGCCC TGTGCTTTGGTTTTGAGGTCGATGCAGCTATGCTGGCCAAAGATGATTGGCACCTCTCTTGCTG CTGCTTAAATTTGGAGAGGCTATCCTTGAGATCCAT Transcript length: 165 Transcript exons: 13354505-13354585,13356128-13356211 CTGCAAATCTTCCATTACAGTTGGGTACGCATCCTTGACTTCCACCACAGCAAGACCCTCCGGA TACTTTCTTACCAAAACGGTCGATGCAGCTATGCTGGCCAAAGATGATTGGCACCTCTCTTGCT GCTGCTTAAATTTGGAGAGGCTATCCTTGAGATCCAT Transcript length: 178 Transcript exons: 13354505-13354573,13356103-13356211 CTGCAAATCTTCCATTACAGTTGGGTACGCATCCTTGACTTCCACCACAGCAAGACCCTCCGGA TACTTGTTGGGCCCTGTGCTTTGGTTTTGAGGTCGATGCAGCTATGCTGGCCAAAGATGATTGG CACCTCTCTTGCTGCTGCTTAAATTTGGAGAGGCTATCCTTGAGATCCAT Transcript length: 199 Transcript exons: 13354505-13354597,13356106-13356211 CTGCAAATCTTCCATTACAGTTGGGTACGCATCCTTGACTTCCACCACAGCAAGACCCTCCGGA TACTTTCTTACCAAAACAAGTAGTTGATCGGGCCCTGTGCTTTGGTTTTGAGGTCGATGCAGCT ATGCTGGCCAAAGATGATTGGCACCTCTCTTGCTGCTGCTTAAATTTGGAGAGGCTATCCTTGA GATCCAT Transcript length: 203 Transcript exons: 13354505-13354611,13356116-13356211 CTGCAAATCTTCCATTACAGTTGGGTACGCATCCTTGACTTCCACCACAGCAAGACCCTCCGGA TACTTTCTTACCAAAACAAGTAGTTGATCTTTTCCCTTCAAATCTTTGGTTTTGAGGTCGATGC AGCTATGCTGGCCAAAGATGATTGGCACCTCTCTTGCTGCTGCTTAAATTTGGAGAGGCTATCC TTGAGATCCAT Transcript length: 213 Transcript exons: 13354505-13354549,13356044-13356211 CTGCAAATCTTCCATTACAGTTGGGTACGCATCCTTGACTTCCACATCATTTGAAAACTTAATA GGTTGTAGTGGCCTTGCTGGAGCGGATGGAGCATTAACCGGTTGGGCCCTGTGCTTTGGTTTTG AGGTCGATGCAGCTATGCTGGCCAAAGATGATTGGCACCTCTCTTGCTGCTGCTTAAATTTGGA GAGGCTATCCTTGAGATCCAT Transcript length: 225 Transcript exons: 13354505-13354566,13356049-13356211 CTGCAAATCTTCCATTACAGTTGGGTACGCATCCTTGACTTCCACCACAGCAAGACCCTCCGTT GAAAACTTAATAGGTTGTAGTGGCCTTGCTGGAGCGGATGGAGCATTAACCGGTTGGGCCCTGT GCTTTGGTTTTGAGGTCGATGCAGCTATGCTGGCCAAAGATGATTGGCACCTCTCTTGCTGCTG CTTAAATTTGGAGAGGCTATCCTTGAGATCCAT Transcript length: 238 Transcript exons: 13354505-13354614,13356084-13356211 CTGCAAATCTTCCATTACAGTTGGGTACGCATCCTTGACTTCCACCACAGCAAGACCCTCCGGA TACTTTCTTACCAAAACAAGTAGTTGATCTTTTCCCTTCAAATCATGCGGATGGAGCATTAACC GGTTGGGCCCTGTGCTTTGGTTTTGAGGTCGATGCAGCTATGCTGGCCAAAGATGATTGGCACC TCTCTTGCTGCTGCTTAAATTTGGAGAGGCTATCCTTGAGATCCAT Transcript length: 263 Transcript exons: 13354505-13354558,13356003-13356211 CTGCAAATCTTCCATTACAGTTGGGTACGCATCCTTGACTTCCACCACAGCAAGGGAGATTTCC TAACTGAATTGATGTGTTGTAGCCTTTCTGTATCATTTGAAAACTTAATAGGTTGTAGTGGCCT TGCTGGAGCGGATGGAGCATTAACCGGTTGGGCCCTGTGCTTTGGTTTTGAGGTCGATGCAGCT ATGCTGGCCAAAGATGATTGGCACCTCTCTTGCTGCTGCTTAAATTTGGAGAGGCTATCCTTGA GATCCAT Transcript length: 501 Transcript exons: 13354505-13354621,13355041-13355172,13355960-13356211 CTGCAAATCTTCCATTACAGTTGGGTACGCATCCTTGACTTCCACCACAGCAAGACCCTCCGGA TACTTTCTTACCAAAACAAGTAGTTGATCTTTTCCCTTCAAATCATGCTTGGACTTGTAAGAGA AACGTCTCCCATCATAATGTACTTTAGGATTGTTCCTCAGACTGTCAAAGACAGACTTATTCCC ATGGATATCAACATAAGTTGTTTCATTTATTTGCTCCGCAGTAAAAGCTTGTCTTGTCTTGTAC AGCAATTCAATGACAAGTTTGATCTGTGCTCCAATAGGAGATTTCCTAACTGAATTGATGTGTT GTAGCCTTTCTGTATCATTTGAAAACTTAATAGGTTGTAGTGGCCTTGCTGGAGCGGATGGAGC ATTAACCGGTTGGGCCCTGTGCTTTGGTTTTGAGGTCGATGCAGCTATGCTGGCCAAAGATGAT TGGCACCTCTCTTGCTGCTGCTTAAATTTGGAGAGGCTATCCTTGAGATCCAT
Genomic sequence	CTGCAAATCTTCCATTACAGTTGGGTACGCATCCTTGACTTCCACCACAGCAAGACCCTCCGGA TACTTTCTTACCAAAACAAGTAGTTGATCTTTTCCCTTCAAATCATGCTTGGACTGCACGTTTA TCAACAATGATTAACGCGTGAAACCGTAGAAGTAAATCAACTTCAAACAAGATGGGAAGCCTAT GTAAACTTAAGACTAAACATTTCTGATGTTCTCCCATAAATAATTGTCATCATTATATCATTTT CCCCGAAACAAGCATTAAAGAAAAACATTTCATTATCAATTACAAATTCCATGGTCATGACAGG TTTAGCTTGCCACACCAGTGATTAATAGTCGAAATGCAATATGATATTAAGGCATTAAGCAATA CTTCTGAATTAATTATGTTTAGTGGGGAACATAGGATGAGAGCCATTAATATTATTTCAGGTAG GAAGGATAGACAATTGGGTAAATATACCAATGAAACAAGTATTGATGTTAGCAAGACTAGTAGT TACTGGAATAACAAACTTCTTTACCTTGTAAGAGAAACGTCTCCCATCATAATGTACTTTAGGA TTGTTCCTCAGACTGTCAAAGACAGACTTATTCCCATGGATATCAACATAAGTTGTTTCATTTA TTTGCTCCGCAGTAAAAGCTTGTCTTGTCTGCAGATTTTGAAGACATCTCAGTTACAACAACAA TACGCAATACAGCATTGCTATTTATAAGGAAGTTCACAAAACATTTGTTTTGCTATCATTCATG AAGACATTGGTAAACCATTTTGACAACTATAACTAAAATGCAGAAAATGGACCAGCGCGGAAAT CATCATAGTGCTCTTTAATACTGTGATTCTATAAATTACATAAGTTACTTTTAACAACTTTTGT AGCTACAAGTTGTATGGGTTGTCCCTTACAAATTTTCTTCCTGAGCATATAATCCTGGCTGCAC CACTGTATGCAGCATTAATACAAATTAAATGTGTACTTCACATATTGCTTATAATAGTTATTGT CAATGCATCCTTGTATCTTTAACCAGATATCAACATGCACATCATTGTTGAACACAGAATAAGC AGCAAGGCACCAAATTTTGCATATCTGAATTTGCTGGCTGAGTATCTTGCATGCACCAAGGGGT GTGAAACAATGATAAATAACAGAACAAAGCAAAAGGTAAACGTCTTATGCACTCTCATATAATA TGTTAACAATTCAGGCTCCATTGATCCAAAAAAAAAAAGAAGTACTAATCAAGGGCATAATATT CTAATATGGTAACAGATTATACAGAACCATTGGCATTTACTGGCATATAAACTCAATCAACATG GTGACTTGCAGGATCATTGGAAGACATTACATACCAGAACTGGGGGAACATTCCTGTTTATACT ATTATGGAAAGGAAAATGAAACAAGGTTGTAGCTTAGTGAGATTTACCTTGTACAGCAATTCAA TGACAAGTTTGATCTGTGCTCCAATAGGAGATTTCCTAACTGAATTGATGTGTTGTAGCCTTTC TGTATCATTTGAAAACTTAATAGGTTGTAGTGGCCTTGCTGGAGCGGATGGAGCATTAACCGGT TGGGCCCTGTGCTTTGGTTTTGAGGTCGATGCAGCTATGCTGGCCAAAGATGATTGGCACCTCT CTTGCTGCTGCTTAAATTTGGAGAGGCTATCCTTGAGATCCAT

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_002801* osi_circ_008390 						
					
						PMCS
						0.566380595

Conservation Information
Conserved circRNAs	osi_circ_002801* osi_circ_008390
PMCS	0.566380595

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							13355977-13354592(+)
13356213-13354507(-)
						
						Potential amino acid sequence
						
							MTSLICAPIGDFLTELMCCSLSVSFENLIGCSGLAGADGALTGWALCFGFEVDAAMLAKDDWHL
SCCCLNLERLSLRSICKSSITVGYASLTSTTARPSGYFLTKTSS*(+)
MDLKDSLSKFKQQQERCQSSLASIAASTSKPKHRAQPVNAPSAPARPLQPIKFSNDTERLQHIN
SVRKSPIGAQIKLVIELLYKTRQAFTAEQINETTYVDIHGNKSVFDSLRNNPKVHYDGRRFSYK
SKHDLKGKDQLLVLVRKYPEGLAVVEVKDAYPTVMEDLQMDLKDSLSKFKQQQERCQSSLASIA
ASTSKPKHRAQPVNAPSAPARPLQPIKFSNDTERLQHINSVRKSPIGAQIKLVIELLYKTRQAF
TAEQINETTYVDIHGNKSVFDSLRNNPKVHYDGRRFSYKSKHDLKGKDQLLVLVRKYPEGLAVV
EVKDAYPTVMEDLQMDLKDSLSKFKQQQERCQSSLASIAASTSKPKHRAQPVNAPSAPARPLQP
IKFSNDTERLQHINSVRKSPIGAQIKLVIELLYKTRQAFTAEQINETTYVDIHGNKSVFDSLRN
NPKVHYDGRRFSYKSKHDLKGKDQLLVLVRKYPEGLAVVEVKDAYPTVMEDLQMDLKDSLSKFK
QQQERCQSSLASIAASTSKPKHRAQPVNAPSAPARPLQPIKFSNDTERLQHINSVRKSPIGAQI
KLVIELLYKTRQAFTAEQINETTYVDIHGNKSVFDSLRNNPKVHYDGRRFSYKSKHDLKGKDQL
LVLVRKYPEGLAVVEVKDAYPTVMEDLQ(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						responsive to Pi-starvation

Functional Information
Coding potential	Y
Potential coding position	13355977-13354592(+) 13356213-13354507(-)
Potential amino acid sequence	MTSLICAPIGDFLTELMCCSLSVSFENLIGCSGLAGADGALTGWALCFGFEVDAAMLAKDDWHL SCCCLNLERLSLRSICKSSITVGYASLTSTTARPSGYFLTKTSS*(+) MDLKDSLSKFKQQQERCQSSLASIAASTSKPKHRAQPVNAPSAPARPLQPIKFSNDTERLQHIN SVRKSPIGAQIKLVIELLYKTRQAFTAEQINETTYVDIHGNKSVFDSLRNNPKVHYDGRRFSYK SKHDLKGKDQLLVLVRKYPEGLAVVEVKDAYPTVMEDLQMDLKDSLSKFKQQQERCQSSLASIA ASTSKPKHRAQPVNAPSAPARPLQPIKFSNDTERLQHINSVRKSPIGAQIKLVIELLYKTRQAF TAEQINETTYVDIHGNKSVFDSLRNNPKVHYDGRRFSYKSKHDLKGKDQLLVLVRKYPEGLAVV EVKDAYPTVMEDLQMDLKDSLSKFKQQQERCQSSLASIAASTSKPKHRAQPVNAPSAPARPLQP IKFSNDTERLQHINSVRKSPIGAQIKLVIELLYKTRQAFTAEQINETTYVDIHGNKSVFDSLRN NPKVHYDGRRFSYKSKHDLKGKDQLLVLVRKYPEGLAVVEVKDAYPTVMEDLQMDLKDSLSKFK QQQERCQSSLASIAASTSKPKHRAQPVNAPSAPARPLQPIKFSNDTERLQHINSVRKSPIGAQI KLVIELLYKTRQAFTAEQINETTYVDIHGNKSVFDSLRNNPKVHYDGRRFSYKSKHDLKGKDQL LVLVRKYPEGLAVVEVKDAYPTVMEDLQ(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	responsive to Pi-starvation

			
						 Other Information
					
						References
						Lu et al., 2015;Ye et al., 2015;Chu et al., 2017

circRNA

Detail information of Os10g0397200_circ_g.5

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