Detailed infomation of each circRNA
| General Information | |
|---|---|
| CircRNA Name | Zm00001d027259_circ_g.1 |
| ID in PlantcircBase | zma_circ_006332 |
| Alias | zma_circ_0000695 |
| Organism | Zea mays |
| Position | chr1: 697140-701105 JBrowse» |
| Reference genome | AGPv4.38 |
| Type | u-circRNA |
| Identification method | find_circ |
| Parent gene | Zm00001d027259 |
| Parent gene annotation |
tRNA/rRNA methyltransferase (SpoU) family protein |
| Parent gene strand | - |
| Alternative splicing | Zm00001d027259_circ_g.2 |
| Support reads | NA |
| Tissues | leaf, root |
| Exon boundary | Yes-Yes |
| Splicing signals | CT-AC |
| Number of exons covered | Zm00001d027259_T032:4 Zm00001d027259_T040:4 Zm00001d027259_T021:4 Zm00001d027259_T019:4 Zm00001d027259_T016:4 Zm00001d027259_T024:4 Zm00001d027259_T009:4 Zm00001d027259_T056:4 Zm00001d027259_T043:4 Zm00001d027259_T002:4 Zm00001d027259_T003:4 Zm00001d027259_T058:4 Zm00001d027259_T025:4 Zm00001d027259_T035:4 Zm00001d027259_T067:4 Zm00001d027259_T048:4 Zm00001d027259_T060:4 Zm00001d027259_T042:4 Zm00001d027259_T027:4 Zm00001d027259_T038:4 Zm00001d027259_T029:4 Zm00001d027259_T010:4 Zm00001d027259_T049:2 Zm00001d027259_T006:4 Zm00001d027259_T011:4 Zm00001d027259_T007:4 Zm00001d027259_T064:4 Zm00001d027259_T062:4 Zm00001d027259_T015:4 Zm00001d027259_T004:4 Zm00001d027259_T008:4 Zm00001d027259_T055:4 Zm00001d027259_T045:4 Zm00001d027259_T046:4 Zm00001d027259_T051:3 Zm00001d027259_T034:4 Zm00001d027259_T053:4 Zm00001d027259_T013:4 Zm00001d027259_T018:4 |
| Conservation Information | |
|---|---|
| Conserved circRNAs | NA |
| PMCS | 0.062938601 |
| Functional Information | |
|---|---|
| Coding potential | N |
| Potential coding position |
NA |
| Potential amino acid sequence |
NA |
| Sponge-miRNAs | NA |
| circRNA-miRNA-mRNA network | VISUALIZATION |
| Potential function description | NA |
| Other Information | |
|---|---|
| References | Ma et al., 2021b |