Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d027259_circ_g.1 |
ID in PlantcircBase | zma_circ_006332 |
Alias | zma_circ_0000695 |
Organism | Zea mays |
Position | chr1: 697140-701105 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d027259 |
Parent gene annotation |
tRNA/rRNA methyltransferase (SpoU) family protein |
Parent gene strand | - |
Alternative splicing | Zm00001d027259_circ_g.2 |
Support reads | NA |
Tissues | leaf, root |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | Zm00001d027259_T032:4 Zm00001d027259_T040:4 Zm00001d027259_T021:4 Zm00001d027259_T019:4 Zm00001d027259_T016:4 Zm00001d027259_T024:4 Zm00001d027259_T009:4 Zm00001d027259_T056:4 Zm00001d027259_T043:4 Zm00001d027259_T002:4 Zm00001d027259_T003:4 Zm00001d027259_T058:4 Zm00001d027259_T025:4 Zm00001d027259_T035:4 Zm00001d027259_T067:4 Zm00001d027259_T048:4 Zm00001d027259_T060:4 Zm00001d027259_T042:4 Zm00001d027259_T027:4 Zm00001d027259_T038:4 Zm00001d027259_T029:4 Zm00001d027259_T010:4 Zm00001d027259_T049:2 Zm00001d027259_T006:4 Zm00001d027259_T011:4 Zm00001d027259_T007:4 Zm00001d027259_T064:4 Zm00001d027259_T062:4 Zm00001d027259_T015:4 Zm00001d027259_T004:4 Zm00001d027259_T008:4 Zm00001d027259_T055:4 Zm00001d027259_T045:4 Zm00001d027259_T046:4 Zm00001d027259_T051:3 Zm00001d027259_T034:4 Zm00001d027259_T053:4 Zm00001d027259_T013:4 Zm00001d027259_T018:4 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.062938601 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ma et al., 2021b |