Detail information of BGIOSGA023335_circ_g.2


General Information
CircRNA Name BGIOSGA023335_circ_g.2
ID in PlantcircBase osi_circ_006861
Alias 6:27216255|27216467
Organism Oryza sativa ssp. indica
Position chr6: 27216255-27216467  JBrowse»
Reference genome Oryza_indica.ASM465v1.42
Type   e-circRNA
Identification method find_circ
Parent gene BGIOSGA023335
Parent gene annotation NA
Parent gene strand +
Alternative splicing NA
Support reads NA
Tissues leaf
Exon boundary   No-No
Splicing signals   GT-AG
Number of exons covered BGIOSGA023335-TA:1
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   GTTGAGGTGGTGAGCTTTGACAAGTGTGAGGGGATCGTGAAGAAGTACGAGCACCTCGAGGATT
TCCATTGGGCGGTCAGGCCGCTGTTCATTGCTGTAGgactggctacaggccgtatttcgcagat
actaccaaatggatgccttgtcataaaatttccaggcaaatttaaccttggtgaagtatgcagt
tgcttggc
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence GACTGGCTACAGGCCGTATTTCGCAGATACTACCAAATGGATGCCTTGTCATAAAATTTCCAGG
CAAATTTAACCTTGGTGAAGTATGCAGTTGCTTGGCAGATCCCTCTGAGGTTGAGGTGGTGAGC
TTTGACAAGTGTGAGGGGATCGTGAAGAAGTACGAGCACCTCGAGGATTTCCATTGGGCGGTCA
GGCCGCTGTTCATTGCTGTAG
Conservation Information
Conserved circRNAs NA
PMCS
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Huang et al., 2021