Plant Circular RNA Database

Detail information of Zm00001d051590_circ_g.2

			
						 General Information
					
						CircRNA Name
						Zm00001d051590_circ_g.2
					
						ID in PlantcircBase
						zma_circ_008130
					
						Alias
						Zm04circ00063, zma_circ_0001492, ZmciR171
					
						Organism
						
							Zea mays						
					
						Position
						
							chr4: 163898675-163902454  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						CIRI2, find_circ
					
						Parent gene
						
							Zm00001d051590						
					
						Parent gene annotation
						
							Putative SET-domain containing family protein  
							
						Parent gene strand
						+
					
						Alternative splicing
						
							NA						
					
						Support reads
						NA
					
						Tissues
						leaf, endosperm, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d051590_T004:3
Zm00001d051590_T001:4
Zm00001d051590_T006:3
Zm00001d051590_T002:2
Zm00001d051590_T003:2

General Information
CircRNA Name	Zm00001d051590_circ_g.2
ID in PlantcircBase	zma_circ_008130
Alias	Zm04circ00063, zma_circ_0001492, ZmciR171
Organism	Zea mays
Position	chr4: 163898675-163902454 JBrowse»
Reference genome	AGPv4.38
Type	ue-circRNA
Identification method	CIRI2, find_circ
Parent gene	Zm00001d051590
Parent gene annotation	Putative SET-domain containing family protein
Parent gene strand	+
Alternative splicing	NA
Support reads	NA
Tissues	leaf, endosperm, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d051590_T004:3 Zm00001d051590_T001:4 Zm00001d051590_T006:3 Zm00001d051590_T002:2 Zm00001d051590_T003:2

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TGACTGCATAAGCTGTGAATGGGTACAAAATTCTATTGAGACGTGGAATCAAAAGTGTATGAAC
GCACATGATGCCGAGACTATTGAAATGCTTTGTGAGaactaagtcaacagtctttatgggcttc
atgctagtagatgatagttcctggcttcctgcactgcttttggaagacctgccttttcaatcat
agaggatt

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1465
Transcript exons: 163898675-163899614,163900369-163900671,163900743-163900
853,163902344-163902454
AACTAAGTCAACAGTCTTTATGGGCTTCATGCTAGTAGATGATAGTTCCTGGCTTCCTGCACTG
CTTTTGGAAGACCTGCCTTTTCAATCATAGAGGATTGGTAGACCAGATCCTGGCAAAGCAATGC
TGATGGACCCTCCTGTTATGCAAATGGACTGCAAGTTGAAAAATGCTATGGATAAAACACCACA
AATCGCCTATGATAGGAAGCTGACCGTCTCACATGATGATTATGGGTGGGCAGGCTCTGATGTC
CACCTAAAAGATGATACAATAGTATGTAGCCCTGTCGATCTTAGCGATGCTTGTCAATCAGGCA
TGGATCGGGTATTAGATTCTGCTTCCAAAAATTCATCTCTTAATTTGGGCGATTTATCTCAGGG
GACAGAACTAAGAGAGAAGAATAGCGACAGTTCTTACTCCGATGTAAAACTTCAGTTAAATTTA
AGTGCTGGAAATTATAATGGCTTGCAAACTGATGATTATAGCTTTAATAAACAGAGTTTTGGTA
AGAAGGATATGCATCATCCTCAGGAAGAGATACATTCTTCTCCCAATACAATGTCATTACCAAG
TCCATGCAGACTCAATGGAGACGTCACACCTTGTGAAGCGGAGAAAATAGCAGAGGATCGTGGC
AAAGTAGATGGGATTGTAGATGCTGTAAGTAAGGAAGTCAAAACTGACTTGGTAGGATGCCATG
CACGGCAGGAAGAATTGCAATGCACGCTCCAAGATCTATCAGAAATAGCCTGCAGTATTGATTT
AGTACGTAATAAATCTTCTCCACAAGAAGAGAAGAAGTCTGTTTCCCCTTTGAATGACATGGGC
CATAATGTGGATAACAATAGTTGTAATGGTGATACCAATTATAAAGGGCAGGAGCTCAATATGG
GGAATGTTGGAGATGAGGATCATGCTGTAGCACTTTGGGTGAAGTGGAGAGGAAAATGGCAAAC
TGGAATCCGATGCTGTAGAGCAGATTGTCCTTTACCTACTCTAAGGGCAAAACCAACACATGAC
AGGAAGACCTATATAGTTGTTTTCTTCCCACGAACAAAAACTTACTCTTGGGTAGACATGCTAC
TTGTTCTTCCAATAGAGGAATGTCCTTTGCCACTTGTGAATGGAACTCATCGTAAATGGAGAAA
GCTGGTAAAGGATTTGAACATTCCTCGACGATTCAACATACAGAATCTTGCCATTTTAATGATA
AATTTAATTGATGAGCTTCATATTGAGGCTGTAGTTGATAATGCACGGAAGGCTACAACATGGA
AAGAATTTGCCCTGGAAGCATCTTGCTGTAGAGATTACACTGATCTTGGGAAGATGCTCCTCAA
ATTTCAAAATATGATTCTTCCTGACTGCATAAGCTGTGAATGGGTACAAAATTCTATTGAGACG
TGGAATCAAAAGTGTATGAACGCACATGATGCCGAGACTATTGAAATGCTTTGTGAG
						
					

						Genomic sequence
						
							AACTAAGTCAACAGTCTTTATGGGCTTCATGCTAGTAGATGATAGTTCCTGGCTTCCTGCACTG
CTTTTGGAAGACCTGCCTTTTCAATCATAGAGGATTGGTAGACCAGATCCTGGCAAAGCAATGC
TGATGGACCCTCCTGTTATGCAAATGGACTGCAAGTTGAAAAATGCTATGGATAAAACACCACA
AATCGCCTATGATAGGAAGCTGACCGTCTCACATGATGATTATGGGTGGGCAGGCTCTGATGTC
CACCTAAAAGATGATACAATAGTATGTAGCCCTGTCGATCTTAGCGATGCTTGTCAATCAGGCA
TGGATCGGGTATTAGATTCTGCTTCCAAAAATTCATCTCTTAATTTGGGCGATTTATCTCAGGG
GACAGAACTAAGAGAGAAGAATAGCGACAGTTCTTACTCCGATGTAAAACTTCAGTTAAATTTA
AGTGCTGGAAATTATAATGGCTTGCAAACTGATGATTATAGCTTTAATAAACAGAGTTTTGGTA
AGAAGGATATGCATCATCCTCAGGAAGAGATACATTCTTCTCCCAATACAATGTCATTACCAAG
TCCATGCAGACTCAATGGAGACGTCACACCTTGTGAAGCGGAGAAAATAGCAGAGGATCGTGGC
AAAGTAGATGGGATTGTAGATGCTGTAAGTAAGGAAGTCAAAACTGACTTGGTAGGATGCCATG
CACGGCAGGAAGAATTGCAATGCACGCTCCAAGATCTATCAGAAATAGCCTGCAGTATTGATTT
AGTACGTAATAAATCTTCTCCACAAGAAGAGAAGAAGTCTGTTTCCCCTTTGAATGACATGGGC
CATAATGTGGATAACAATAGTTGTAATGGTGATACCAATTATAAAGGGCAGGAGCTCAATATGG
GGAATGTTGGAGATGAGGATCATGCTGTAGCACTTTGGGTGAAGGTACATTTTTCTTTATTTAA
ATTCGTTTTGGGGTTATATGAGCAAGTACTTGTCATGTTTCAGGTTCCAGAATCTGTGCATTTA
GTTTTAGTAGGTACACCATGTATTATTGGGGTGGCCAACTCATAGCTCTGTTATGATTTTCTAA
TTGTAGTCTTAGTTGTAGCTTTATTCCAGTTAAACAATGGTATGCTTGAATGGTCCATGTAAAG
TCTCGTTTTCTTTATTAGTCCTAAAAAAGGTAACTTGAGATCGAAGGTTGAAGCCTTAACTAAA
ATGGTTAGACGAGGCTTCTTTTCATATATGATCTTAGAATGAATACTGTCCCATGTCCTATTAA
ACATTTTTGTTTCATGACTCGGATAGAATTTTGTAATGTAAGGATTGTCCCCCTAAAAGTGGTA
CCCTTGCTTTCTTCTGTTTATTCAGCTAAATATTGTGTATTTATATAAAGAAGAAGGGGTATCT
TGGGACCAAAATAACTAGTTTCTGTACACTGAGCTTTAGGTACTGCAATAATATGTTCTCTTTT
TGTGCATAATGAAGATAATATATTTGATACATTGGTGATTCTAGTATAATTTACTATTGCAAAA
ATGGAAAAGGTGAAATTTTGTTCACTGAGCTACAGCTACCCACAAGATTGCTAGTATTCCTAAT
ATAGTTCTGCTACGTTTTTTTTGTGGCAGAGAAGTTTTTGTTTTTTCTAATGCCTCCTCTGTGA
ATGTGTTTTATCCTTTTCATGTGAAAACAGTGGAGAGGAAAATGGCAAACTGGAATCCGATGCT
GTAGAGCAGATTGTCCTTTACCTACTCTAAGGGCAAAACCAACACATGACAGGAAGACCTATAT
AGTTGTTTTCTTCCCACGAACAAAAACTTACTCTTGGGTAGACATGCTACTTGTTCTTCCAATA
GAGGAATGTCCTTTGCCACTTGTGAATGGAACTCATCGTAAATGGAGAAAGCTGGTAAAGGATT
TGAACATTCCTCGACGATTCAACATACAGAATCTTGCCATTTTAATGATAAATTTAATTGATGA
GCTTCATATTGAGGTTGGTTATGTTCTTACAAGTTTTCTTATGCCTTTGACTTCACTTGTTGAC
ACAATTTATATGTTTATTAGGCTGTAGTTGATAATGCACGGAAGGCTACAACATGGAAAGAATT
TGCCCTGGAAGCATCTTGCTGTAGAGATTACACTGATCTTGGGAAGATGCTCCTCAAATTTCAA
AATGTAAATCCGAGAACCTTGTTTTGTGTGGATATCTTGTGGAGCGTCATGTCACTTTTTTTAA
GCAAGTACAATGTCTGTTTTGCTACTTTGCACTGCTTACTTTTTTTTTACTTCTCCCCCCCCCC
CCCCCCCCCATTTTTCCTGATTGTATCACGGAAGTGTGTTCCATGTGACTATTTGACTGTGGTT
TATCTCTTTGTGACCTGTACTTGATGTTTGCTATCTTCAATGGCAGTTAATTATGTAGCCTATT
TATGTCTGTAGTCTTACTATACATCATTTTTTTTTCTTTATCTGTTGCTGGATGTACCATAGTC
ATTGTTCTGCACATTTGATCTAGGATGTGTCACAGACTTCTGGTAAGACAATTATCATAGCATG
AAATAGAGCCTGGAAATGATAATTAGCATTTCCATCATTAGTGATTTTATCATGTTGCAGTGTT
TCTGAAATTCATCAAAAAGTTGTTTATGTAGTTAACCAAAAGTTAAGTAAGGCTGCTGATTCAC
TTTCAAAATCGTCTTAAATGTCAAGAACCAAAATAGACAAGCAGCCAATCTAGCCCTGTTCATC
TTGTGCAGTTGTGCTGGCCGTGACACTTGTCTTTTTTTTGAATCTCAACATCAAAGATGAATTT
GGGGTTGAACTTTTGCAAGTCTATTTAACTTTGTGCTTACCACGTGCATACTTTTTTATGTTTC
TTTTGAAACATTGCAACATGTTGGCTCTACATTTTTGCTAAATGGGATGCTTGATGCCAAACCC
CGTGACACCAGTTACAATAATGCCTTAGCAAGTTAGGTAAACTCGACATGAGATCCAACAAGAT
AGTAATAAACAAAAAAAAACTAATTTAGTGTTAGTAATATACTAATATCCATTAGCTTTTCCAA
TTTGCTGATAAAAAATGGAAAAGAGAGAAACATTGATATCTTCCTTACATCTTGTATCTATCAT
AATTTATCCTATTGAGTCTTAACTCCTTTAAAAATTCCTGGAGGTTTAGATTAAAGATTGGTAG
AATATGAAGCTATAATAGGACAATAAGTTTTTTCCATTTTTTGTGGGTAGGGGTGCAGGTTCGA
CCAATATCTAGGAGGAACTAGCCGTTATTGCCAATAGATAGAATTACCCCCACCCCACACACAT
GCACCTATTACCAACTGAGCTAGGTCAGTTCCTAAAAGTTTAAGAAATCACCATCCATTTCAAA
GTGTACGCTCGATGATACTTATCATGATATGTTTATTTAATCCAGCTATACAAAAAGACAACTC
ATGTAGGAATACCTCCTCACTTTGTTGATCATTATGTGGTATCTCAAGCTGGACTAGATGTTCA
CTAGGGCTTTCTGAGTTTCCATAGATGTGTGTCATTGGTGATCTTACAAATATATGAACAATGT
TTGGTTCTTCATTATCCAACATGGCAATTATTCTCTTGTGATGATGTTTCTCAGCATTGTTTCA
TCTTTAATTGTTTTGTTTCAGATGATTCTTCCTGACTGCATAAGCTGTGAATGGGTACAAAATT
CTATTGAGACGTGGAATCAAAAGTGTATGAACGCACATGATGCCGAGACTATTGAAATGCTTTG
TGAG
						
					

			
		

Sequences
Splice junction sequence	TGACTGCATAAGCTGTGAATGGGTACAAAATTCTATTGAGACGTGGAATCAAAAGTGTATGAAC GCACATGATGCCGAGACTATTGAAATGCTTTGTGAGaactaagtcaacagtctttatgggcttc atgctagtagatgatagttcctggcttcctgcactgcttttggaagacctgccttttcaatcat agaggatt
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1465 Transcript exons: 163898675-163899614,163900369-163900671,163900743-163900 853,163902344-163902454 AACTAAGTCAACAGTCTTTATGGGCTTCATGCTAGTAGATGATAGTTCCTGGCTTCCTGCACTG CTTTTGGAAGACCTGCCTTTTCAATCATAGAGGATTGGTAGACCAGATCCTGGCAAAGCAATGC TGATGGACCCTCCTGTTATGCAAATGGACTGCAAGTTGAAAAATGCTATGGATAAAACACCACA AATCGCCTATGATAGGAAGCTGACCGTCTCACATGATGATTATGGGTGGGCAGGCTCTGATGTC CACCTAAAAGATGATACAATAGTATGTAGCCCTGTCGATCTTAGCGATGCTTGTCAATCAGGCA TGGATCGGGTATTAGATTCTGCTTCCAAAAATTCATCTCTTAATTTGGGCGATTTATCTCAGGG GACAGAACTAAGAGAGAAGAATAGCGACAGTTCTTACTCCGATGTAAAACTTCAGTTAAATTTA AGTGCTGGAAATTATAATGGCTTGCAAACTGATGATTATAGCTTTAATAAACAGAGTTTTGGTA AGAAGGATATGCATCATCCTCAGGAAGAGATACATTCTTCTCCCAATACAATGTCATTACCAAG TCCATGCAGACTCAATGGAGACGTCACACCTTGTGAAGCGGAGAAAATAGCAGAGGATCGTGGC AAAGTAGATGGGATTGTAGATGCTGTAAGTAAGGAAGTCAAAACTGACTTGGTAGGATGCCATG CACGGCAGGAAGAATTGCAATGCACGCTCCAAGATCTATCAGAAATAGCCTGCAGTATTGATTT AGTACGTAATAAATCTTCTCCACAAGAAGAGAAGAAGTCTGTTTCCCCTTTGAATGACATGGGC CATAATGTGGATAACAATAGTTGTAATGGTGATACCAATTATAAAGGGCAGGAGCTCAATATGG GGAATGTTGGAGATGAGGATCATGCTGTAGCACTTTGGGTGAAGTGGAGAGGAAAATGGCAAAC TGGAATCCGATGCTGTAGAGCAGATTGTCCTTTACCTACTCTAAGGGCAAAACCAACACATGAC AGGAAGACCTATATAGTTGTTTTCTTCCCACGAACAAAAACTTACTCTTGGGTAGACATGCTAC TTGTTCTTCCAATAGAGGAATGTCCTTTGCCACTTGTGAATGGAACTCATCGTAAATGGAGAAA GCTGGTAAAGGATTTGAACATTCCTCGACGATTCAACATACAGAATCTTGCCATTTTAATGATA AATTTAATTGATGAGCTTCATATTGAGGCTGTAGTTGATAATGCACGGAAGGCTACAACATGGA AAGAATTTGCCCTGGAAGCATCTTGCTGTAGAGATTACACTGATCTTGGGAAGATGCTCCTCAA ATTTCAAAATATGATTCTTCCTGACTGCATAAGCTGTGAATGGGTACAAAATTCTATTGAGACG TGGAATCAAAAGTGTATGAACGCACATGATGCCGAGACTATTGAAATGCTTTGTGAG
Genomic sequence	AACTAAGTCAACAGTCTTTATGGGCTTCATGCTAGTAGATGATAGTTCCTGGCTTCCTGCACTG CTTTTGGAAGACCTGCCTTTTCAATCATAGAGGATTGGTAGACCAGATCCTGGCAAAGCAATGC TGATGGACCCTCCTGTTATGCAAATGGACTGCAAGTTGAAAAATGCTATGGATAAAACACCACA AATCGCCTATGATAGGAAGCTGACCGTCTCACATGATGATTATGGGTGGGCAGGCTCTGATGTC CACCTAAAAGATGATACAATAGTATGTAGCCCTGTCGATCTTAGCGATGCTTGTCAATCAGGCA TGGATCGGGTATTAGATTCTGCTTCCAAAAATTCATCTCTTAATTTGGGCGATTTATCTCAGGG GACAGAACTAAGAGAGAAGAATAGCGACAGTTCTTACTCCGATGTAAAACTTCAGTTAAATTTA AGTGCTGGAAATTATAATGGCTTGCAAACTGATGATTATAGCTTTAATAAACAGAGTTTTGGTA AGAAGGATATGCATCATCCTCAGGAAGAGATACATTCTTCTCCCAATACAATGTCATTACCAAG TCCATGCAGACTCAATGGAGACGTCACACCTTGTGAAGCGGAGAAAATAGCAGAGGATCGTGGC AAAGTAGATGGGATTGTAGATGCTGTAAGTAAGGAAGTCAAAACTGACTTGGTAGGATGCCATG CACGGCAGGAAGAATTGCAATGCACGCTCCAAGATCTATCAGAAATAGCCTGCAGTATTGATTT AGTACGTAATAAATCTTCTCCACAAGAAGAGAAGAAGTCTGTTTCCCCTTTGAATGACATGGGC CATAATGTGGATAACAATAGTTGTAATGGTGATACCAATTATAAAGGGCAGGAGCTCAATATGG GGAATGTTGGAGATGAGGATCATGCTGTAGCACTTTGGGTGAAGGTACATTTTTCTTTATTTAA ATTCGTTTTGGGGTTATATGAGCAAGTACTTGTCATGTTTCAGGTTCCAGAATCTGTGCATTTA GTTTTAGTAGGTACACCATGTATTATTGGGGTGGCCAACTCATAGCTCTGTTATGATTTTCTAA TTGTAGTCTTAGTTGTAGCTTTATTCCAGTTAAACAATGGTATGCTTGAATGGTCCATGTAAAG TCTCGTTTTCTTTATTAGTCCTAAAAAAGGTAACTTGAGATCGAAGGTTGAAGCCTTAACTAAA ATGGTTAGACGAGGCTTCTTTTCATATATGATCTTAGAATGAATACTGTCCCATGTCCTATTAA ACATTTTTGTTTCATGACTCGGATAGAATTTTGTAATGTAAGGATTGTCCCCCTAAAAGTGGTA CCCTTGCTTTCTTCTGTTTATTCAGCTAAATATTGTGTATTTATATAAAGAAGAAGGGGTATCT TGGGACCAAAATAACTAGTTTCTGTACACTGAGCTTTAGGTACTGCAATAATATGTTCTCTTTT TGTGCATAATGAAGATAATATATTTGATACATTGGTGATTCTAGTATAATTTACTATTGCAAAA ATGGAAAAGGTGAAATTTTGTTCACTGAGCTACAGCTACCCACAAGATTGCTAGTATTCCTAAT ATAGTTCTGCTACGTTTTTTTTGTGGCAGAGAAGTTTTTGTTTTTTCTAATGCCTCCTCTGTGA ATGTGTTTTATCCTTTTCATGTGAAAACAGTGGAGAGGAAAATGGCAAACTGGAATCCGATGCT GTAGAGCAGATTGTCCTTTACCTACTCTAAGGGCAAAACCAACACATGACAGGAAGACCTATAT AGTTGTTTTCTTCCCACGAACAAAAACTTACTCTTGGGTAGACATGCTACTTGTTCTTCCAATA GAGGAATGTCCTTTGCCACTTGTGAATGGAACTCATCGTAAATGGAGAAAGCTGGTAAAGGATT TGAACATTCCTCGACGATTCAACATACAGAATCTTGCCATTTTAATGATAAATTTAATTGATGA GCTTCATATTGAGGTTGGTTATGTTCTTACAAGTTTTCTTATGCCTTTGACTTCACTTGTTGAC ACAATTTATATGTTTATTAGGCTGTAGTTGATAATGCACGGAAGGCTACAACATGGAAAGAATT TGCCCTGGAAGCATCTTGCTGTAGAGATTACACTGATCTTGGGAAGATGCTCCTCAAATTTCAA AATGTAAATCCGAGAACCTTGTTTTGTGTGGATATCTTGTGGAGCGTCATGTCACTTTTTTTAA GCAAGTACAATGTCTGTTTTGCTACTTTGCACTGCTTACTTTTTTTTTACTTCTCCCCCCCCCC CCCCCCCCCATTTTTCCTGATTGTATCACGGAAGTGTGTTCCATGTGACTATTTGACTGTGGTT TATCTCTTTGTGACCTGTACTTGATGTTTGCTATCTTCAATGGCAGTTAATTATGTAGCCTATT TATGTCTGTAGTCTTACTATACATCATTTTTTTTTCTTTATCTGTTGCTGGATGTACCATAGTC ATTGTTCTGCACATTTGATCTAGGATGTGTCACAGACTTCTGGTAAGACAATTATCATAGCATG AAATAGAGCCTGGAAATGATAATTAGCATTTCCATCATTAGTGATTTTATCATGTTGCAGTGTT TCTGAAATTCATCAAAAAGTTGTTTATGTAGTTAACCAAAAGTTAAGTAAGGCTGCTGATTCAC TTTCAAAATCGTCTTAAATGTCAAGAACCAAAATAGACAAGCAGCCAATCTAGCCCTGTTCATC TTGTGCAGTTGTGCTGGCCGTGACACTTGTCTTTTTTTTGAATCTCAACATCAAAGATGAATTT GGGGTTGAACTTTTGCAAGTCTATTTAACTTTGTGCTTACCACGTGCATACTTTTTTATGTTTC TTTTGAAACATTGCAACATGTTGGCTCTACATTTTTGCTAAATGGGATGCTTGATGCCAAACCC CGTGACACCAGTTACAATAATGCCTTAGCAAGTTAGGTAAACTCGACATGAGATCCAACAAGAT AGTAATAAACAAAAAAAAACTAATTTAGTGTTAGTAATATACTAATATCCATTAGCTTTTCCAA TTTGCTGATAAAAAATGGAAAAGAGAGAAACATTGATATCTTCCTTACATCTTGTATCTATCAT AATTTATCCTATTGAGTCTTAACTCCTTTAAAAATTCCTGGAGGTTTAGATTAAAGATTGGTAG AATATGAAGCTATAATAGGACAATAAGTTTTTTCCATTTTTTGTGGGTAGGGGTGCAGGTTCGA CCAATATCTAGGAGGAACTAGCCGTTATTGCCAATAGATAGAATTACCCCCACCCCACACACAT GCACCTATTACCAACTGAGCTAGGTCAGTTCCTAAAAGTTTAAGAAATCACCATCCATTTCAAA GTGTACGCTCGATGATACTTATCATGATATGTTTATTTAATCCAGCTATACAAAAAGACAACTC ATGTAGGAATACCTCCTCACTTTGTTGATCATTATGTGGTATCTCAAGCTGGACTAGATGTTCA CTAGGGCTTTCTGAGTTTCCATAGATGTGTGTCATTGGTGATCTTACAAATATATGAACAATGT TTGGTTCTTCATTATCCAACATGGCAATTATTCTCTTGTGATGATGTTTCTCAGCATTGTTTCA TCTTTAATTGTTTTGTTTCAGATGATTCTTCCTGACTGCATAAGCTGTGAATGGGTACAAAATT CTATTGAGACGTGGAATCAAAAGTGTATGAACGCACATGATGCCGAGACTATTGAAATGCTTTG TGAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.157027738

Conservation Information
Conserved circRNAs	NA
PMCS	0.157027738

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							163898800-163898677(+)
163902424-163898765(+)
163898706-163900650(-)
						
						Potential amino acid sequence
						
							MLMDPPVMQMDCKLKNAMDKTPQIAYDRKLTVSHDDYGWAGSDVHLKDDTIVCSPVDLSDACQS
GMDRVLDSASKNSSLNLGDLSQGTELREKNSDSSYSDVKLQLNLSAGNYNGLQTDDYSFNKQSF
GKKDMHHPQEEIHSSPNTMSLPSPCRLNGDVTPCEAEKIAEDRGKVDGIVDAVSKEVKTDLVGC
HARQEELQCTLQDLSEIACSIDLVRNKSSPQEEKKSVSPLNDMGHNVDNNSCNGDTNYKGQELN
MGNVGDEDHAVALWVKWRGKWQTGIRCCRADCPLPTLRAKPTHDRKTYIVVFFPRTKTYSWVDM
LLVLPIEECPLPLVNGTHRKWRKLVKDLNIPRRFNIQNLAILMINLIDELHIEAVVDNARKATT
WKEFALEASCCRDYTDLGKMLLKFQNMILPDCISCEWVQNSIETWNQKCMNAHDAETIEMLCEN
*(+)
MMPRLLKCFVRTKSTVFMGFMLVDDSSWLPALLLEDLPFQS*(+)
MKPIKTVDLVLTKHFNSLGIMCVHTLLIPRLNRILYPFTAYAVRKNHILKFEEHLPKISVISTA
RCFQGKFFPCCSLPCIINYSLNMKLIN*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						responsive to drought stress

Functional Information
Coding potential	Y
Potential coding position	163898800-163898677(+) 163902424-163898765(+) 163898706-163900650(-)
Potential amino acid sequence	MLMDPPVMQMDCKLKNAMDKTPQIAYDRKLTVSHDDYGWAGSDVHLKDDTIVCSPVDLSDACQS GMDRVLDSASKNSSLNLGDLSQGTELREKNSDSSYSDVKLQLNLSAGNYNGLQTDDYSFNKQSF GKKDMHHPQEEIHSSPNTMSLPSPCRLNGDVTPCEAEKIAEDRGKVDGIVDAVSKEVKTDLVGC HARQEELQCTLQDLSEIACSIDLVRNKSSPQEEKKSVSPLNDMGHNVDNNSCNGDTNYKGQELN MGNVGDEDHAVALWVKWRGKWQTGIRCCRADCPLPTLRAKPTHDRKTYIVVFFPRTKTYSWVDM LLVLPIEECPLPLVNGTHRKWRKLVKDLNIPRRFNIQNLAILMINLIDELHIEAVVDNARKATT WKEFALEASCCRDYTDLGKMLLKFQNMILPDCISCEWVQNSIETWNQKCMNAHDAETIEMLCEN (+) MMPRLLKCFVRTKSTVFMGFMLVDDSSWLPALLLEDLPFQS(+) MKPIKTVDLVLTKHFNSLGIMCVHTLLIPRLNRILYPFTAYAVRKNHILKFEEHLPKISVISTA RCFQGKFFPCCSLPCIINYSLNMKLIN*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	responsive to drought stress

			
						 Other Information
					
						References
						Han et al., 2020; Ma et al., 2021b;Zhang et al., 2019

circRNA

Detail information of Zm00001d051590_circ_g.2

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