Plant Circular RNA Database

Detail information of Zm00001d027259_circ_g.3

			
						 General Information
					
						CircRNA Name
						Zm00001d027259_circ_g.3
					
						ID in PlantcircBase
						zma_circ_006334
					
						Alias
						zma_circ_0000701
					
						Organism
						
							Zea mays						
					
						Position
						
							chr1: 711235-714730  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							Zm00001d027259						
					
						Parent gene annotation
						
							tRNA/rRNA methyltransferase (SpoU) family protein
							
						Parent gene strand
						-
					
						Alternative splicing
						
							NA						
					
						Support reads
						NA
					
						Tissues
						leaf, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d027259_T010:8
Zm00001d027259_T027:8
Zm00001d027259_T034:8
Zm00001d027259_T013:8
Zm00001d027259_T048:8
Zm00001d027259_T009:8
Zm00001d027259_T060:4
Zm00001d027259_T058:8
Zm00001d027259_T053:4
Zm00001d027259_T040:8
Zm00001d027259_T062:8
Zm00001d027259_T056:8
Zm00001d027259_T006:8
Zm00001d027259_T015:8
Zm00001d027259_T025:8
Zm00001d027259_T042:8
Zm00001d027259_T032:8
Zm00001d027259_T029:8
Zm00001d027259_T067:8
Zm00001d027259_T035:9
Zm00001d027259_T008:8
Zm00001d027259_T007:8
Zm00001d027259_T064:8
Zm00001d027259_T038:8
Zm00001d027259_T069:8
Zm00001d027259_T016:8
Zm00001d027259_T051:8
Zm00001d027259_T024:8
Zm00001d027259_T019:7
Zm00001d027259_T055:8
Zm00001d027259_T021:8
Zm00001d027259_T045:8

General Information
CircRNA Name	Zm00001d027259_circ_g.3
ID in PlantcircBase	zma_circ_006334
Alias	zma_circ_0000701
Organism	Zea mays
Position	chr1: 711235-714730 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	find_circ
Parent gene	Zm00001d027259
Parent gene annotation	tRNA/rRNA methyltransferase (SpoU) family protein
Parent gene strand	-
Alternative splicing	NA
Support reads	NA
Tissues	leaf, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d027259_T010:8 Zm00001d027259_T027:8 Zm00001d027259_T034:8 Zm00001d027259_T013:8 Zm00001d027259_T048:8 Zm00001d027259_T009:8 Zm00001d027259_T060:4 Zm00001d027259_T058:8 Zm00001d027259_T053:4 Zm00001d027259_T040:8 Zm00001d027259_T062:8 Zm00001d027259_T056:8 Zm00001d027259_T006:8 Zm00001d027259_T015:8 Zm00001d027259_T025:8 Zm00001d027259_T042:8 Zm00001d027259_T032:8 Zm00001d027259_T029:8 Zm00001d027259_T067:8 Zm00001d027259_T035:9 Zm00001d027259_T008:8 Zm00001d027259_T007:8 Zm00001d027259_T064:8 Zm00001d027259_T038:8 Zm00001d027259_T069:8 Zm00001d027259_T016:8 Zm00001d027259_T051:8 Zm00001d027259_T024:8 Zm00001d027259_T019:7 Zm00001d027259_T055:8 Zm00001d027259_T021:8 Zm00001d027259_T045:8

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							ACAAAATTCTTTCCCAAGATTCCATCTGAGCATGAAAGGCTCCACAGGAGGTGTGATTTAGATA
GTCATTTTGTAGCGTACACTCAAACAGCCGCACTACaccctgtaatactgaagaagtaatggag
gtagccaaacgacgctggcttgggcctccaagctttcctttgatagaagggggtaaatccttgt
tgtccaca

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							ACCCTGTAATACTGAAGAAGTAATGGAGGTAGCCAAACGACGCTGGCTTGGGCCTCCAAGCTTT
CCTTTGATAGAAGGGGGTAAATCCTTGTTGTCCACATCTAACCAGAAAATGGAGCAAGACAGTT
TACTGAATGCCACCATATTTTCCTGAGATAAGATTTAAAGAAGGCAATTATTAAAAGCCTGACA
CACAAAGAGCACTCAGTGATGGTTTGAAAAAAAAAAGAGGGTTACCAAAATTAGCAAAAGTGAT
TCTGTGAACATTTTGTTGAGATCATCGAGCACTAATCCATTTAATGTATCTGAACCTCTTAAGA
TTGTATTACTCCGGCAAACAAGCTTTCTCTGTCTCAGCTCAAGTTCCTCAATGAAGCTTAAAAC
AATGATAAAAAATTTTATGGGTATGAAATCTCCACTGGGACATTGCTCAGAGAGCTTGTAGCCA
TATGCCTCCAAAAACTGCAATGAAAATTACCTTTTTGAACCAAAGATAAATTGAAACACACAAG
GGCAATAGAAAAAGATAGCGCACAGCTGAAGTTCAAGACCCGAGCACAATATAGAGATCATATT
GTTTTACAAGTATATATTCAAGCAAGTGACAGAAAAAAACAAACCCTGAAGATTCGTTTCAAAT
GTTCCTCCTCCTCGGTTACAAGAAGAAGGGTTCTAGCCCACCTCCTTGCTTCAGCTTCCCATGC
ATCCACATCCTCGTCATCAAAAACATTCGAACCTTCATTCCGTTTTTGACTTACGAAGGTGGCA
GAGAAATCGATCAGCTTACTCAACAAAGTGTCACCAGGAGAACATTCTTCCTTCTGAAAAAACC
ATTTTTGAACTACTACTCTCAATGGTCCTAAAGGACACACGATAGCAGTGAGAGCCAATGTTAA
TACGGCGTTGTAGACAATATCAAAGGACATATTTAAAAAAAGGTCCCTTCTGTCTTGTGTACAT
ACCAATATAATCAGTGAACTCTCGAGGAATTGTGGCAATGAAATGCAGAAGCTGGTTAAGTGGA
ATTTCAGTGGCATTTATCAGTGATGTTGCAACTTGGATAACCTGTTCACAAACTGCACTGGACT
TCAAGTTAACAAGTTGTCTATTCATAACTGTCACTTATCAAAATTTCTCGATGAGAAAGAGATG
AAGAGTAGAACCTTTCAGACGATACTTTGGATTAAAGTGTTGTTTACTCCTCTCACTGAGAATC
CATAAGACATCTAACAAATCTGTTGGCCTAACTTCTGTAGGTACACATCCATCACATTTGGTCA
CTGCTTTCCCAGATATAGCACATGGCACATCATTTGTCTCTGACTGACGTGTGCATGAAGCAAC
ACAGGATGCAAGAGTCATCAATCCTGCTCGGCCAAATGAATCTTGCTTAGCCGCAGAAGCCAGA
CTCCAAACCAGATGTATGCGGTCACTGTAAAGAACGCATGCATGCAACAGAAGTGGTTCAGTAC
CACACTGCAATTGCAAGGGCTCAGAAATTGAAACCATACTAAAGAGTAGCATGTAAACTCGTGA
ACAAGGATTTACTGTTATAAATAAGCATCCCTTGAAGACACAAATACAAAGACCTCACAGCTCA
AGCATGTGCGTGTATGCCATTGTTATTAAAACTACGTTTAAACGTCAAAACTCTAATTAGAGGT
TGAAACCGTGTTTTAGCGTTTTGGTGTTCTAAACTGTAAAACACAATGTTTCATGTGTTTTAGA
CCATTAGCTACTTTTGGGCCAAGTCTGTTAGTTACTTTTGGGGTCCAATCCGGCTCATGGGTGA
AGTTTTGGTAAGGCACTAACCTCTCTGTTTTGGTATTTAACTTCATGTTATTGTCTGAAATTAT
GATATATTGGTATTTTTCCTATGTTGTTTAAAACTACGTTTAAACTTTTGTTTAAACGTTTAAA
AGTCAAAATTTTACCCATGAGCGTTTCAACATTTTATCGTTTTAATAACCTTAGTGTAGGCTAA
GCCATTATAGTGCACACAAGGCATTTTCTGTTATCAGTTGCTACAGCGATGAAAAGGCAATATT
ATGTAATGGATAAGAGATCTTCATTAAGACAAAAATGCAATAAGATTCATTAGTTAAGCTCCTT
TCATGACACAACATATGCATAAACAACTTTTTCGATATATGTAAAGGGAAAATGCTTCACGTAC
GACCCACCCGTACGACTGGAGTACGACCAACGTAATCTATAGATGTTGTTGCCTCTTATTCTGA
ACTAATGAATGATGAGCCATTAGATGACCTTAGTCGTACTTGAGTCTACCATTGTAGTCGTACA
TGTAGCAGTGATCTATGTAAAGACAGCAGAAGTTAACAAAAAGTGTATTGCTTTGAACAAAAAA
CTCAATTCCACAATCAAAAGTACCAAAACAGTTAGTTAAGCTCTGTTTATGACACAACATATGC
ATAAGCAACTTTTTCGATATATGTAAAGACAGTAGAAGTTAACAAAAAGTGTATTGCTTTTGAA
CCAAAAAAACTCAGTTCCACAATCAAAAGTATCAAAACAGTCAACAAGAAATAAGAAGGCAGTA
GTTACCATCTCGCCAAGTTGTGGGTATAAGTTCTGAAAAATCTCTGAGCATCTTTTATGGTTTT
CGAACTATAAGCACCCCCAATGCCTAAAAGCGGTTTAGAAAGATAAATGAGAATTTATAAAGGC
GTTCATAAAAAGAATGTACTATTGAACAATATGACAAAAGAATTGGATGACAAAAAAAAGCAAG
CTAAAAGACTAGAGCAACGATATTGTGAGCAACATAATTCACTAAATAAGAGGAGGTGTGATGT
ATTTAACAAAGTCACTAGATGAGTTCTCTTTCTTAAATTCAAAATACAAGCACATAAAGTGAAA
TTCCTATCAGGGATAAAATCTATGTCAGACAGAAAGGACTGATAAACTAACAAATCTCCCACAA
GCCTAGGTCAGTTTGAAATACAAACAAAACTTTTAAATCACATTTGCTGGAAAGGGAATATGGA
TGAAGCAATACAAGATTCTCTGGTAAAAATAGATCCACCAAAAAAATAGCTCCATTCCTTTGAG
AGCAGAATCAAATATGTTGTATTGAACTAGTGTAAAACGAATAAAACTAACCAAAATCCTTATG
ATGAACCACATCATTCAAACCACGTATCAGAGGGCCGAGCACAAAACCCCTTGGAATTATATGA
GTGCAAACCTTGTAGCGTTCCCATGCAATATCCAAAAAGGATTGCATAACCAGGCATCTCACTG
CAAAAAAATGTTCAAGCTGGCAAATTATGAAATAACATTCTAAAATATATTGAACACAGATAAC
TATATATCAGTATTCACCTTGAGGATTCTCATGACTGAACCCACGCTCCCACAAAACTGCCATC
CAGTACAAAATTCTTTCCCAAGATTCCATCTGAGCATGAAAGGCTCCACAGGAGGTGTGATTTA
GATAGTCATTTTGTAGCGTACACTCAAACAGCCGCACTAC
						
					

			
		

Sequences
Splice junction sequence	ACAAAATTCTTTCCCAAGATTCCATCTGAGCATGAAAGGCTCCACAGGAGGTGTGATTTAGATA GTCATTTTGTAGCGTACACTCAAACAGCCGCACTACaccctgtaatactgaagaagtaatggag gtagccaaacgacgctggcttgggcctccaagctttcctttgatagaagggggtaaatccttgt tgtccaca
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	ACCCTGTAATACTGAAGAAGTAATGGAGGTAGCCAAACGACGCTGGCTTGGGCCTCCAAGCTTT CCTTTGATAGAAGGGGGTAAATCCTTGTTGTCCACATCTAACCAGAAAATGGAGCAAGACAGTT TACTGAATGCCACCATATTTTCCTGAGATAAGATTTAAAGAAGGCAATTATTAAAAGCCTGACA CACAAAGAGCACTCAGTGATGGTTTGAAAAAAAAAAGAGGGTTACCAAAATTAGCAAAAGTGAT TCTGTGAACATTTTGTTGAGATCATCGAGCACTAATCCATTTAATGTATCTGAACCTCTTAAGA TTGTATTACTCCGGCAAACAAGCTTTCTCTGTCTCAGCTCAAGTTCCTCAATGAAGCTTAAAAC AATGATAAAAAATTTTATGGGTATGAAATCTCCACTGGGACATTGCTCAGAGAGCTTGTAGCCA TATGCCTCCAAAAACTGCAATGAAAATTACCTTTTTGAACCAAAGATAAATTGAAACACACAAG GGCAATAGAAAAAGATAGCGCACAGCTGAAGTTCAAGACCCGAGCACAATATAGAGATCATATT GTTTTACAAGTATATATTCAAGCAAGTGACAGAAAAAAACAAACCCTGAAGATTCGTTTCAAAT GTTCCTCCTCCTCGGTTACAAGAAGAAGGGTTCTAGCCCACCTCCTTGCTTCAGCTTCCCATGC ATCCACATCCTCGTCATCAAAAACATTCGAACCTTCATTCCGTTTTTGACTTACGAAGGTGGCA GAGAAATCGATCAGCTTACTCAACAAAGTGTCACCAGGAGAACATTCTTCCTTCTGAAAAAACC ATTTTTGAACTACTACTCTCAATGGTCCTAAAGGACACACGATAGCAGTGAGAGCCAATGTTAA TACGGCGTTGTAGACAATATCAAAGGACATATTTAAAAAAAGGTCCCTTCTGTCTTGTGTACAT ACCAATATAATCAGTGAACTCTCGAGGAATTGTGGCAATGAAATGCAGAAGCTGGTTAAGTGGA ATTTCAGTGGCATTTATCAGTGATGTTGCAACTTGGATAACCTGTTCACAAACTGCACTGGACT TCAAGTTAACAAGTTGTCTATTCATAACTGTCACTTATCAAAATTTCTCGATGAGAAAGAGATG AAGAGTAGAACCTTTCAGACGATACTTTGGATTAAAGTGTTGTTTACTCCTCTCACTGAGAATC CATAAGACATCTAACAAATCTGTTGGCCTAACTTCTGTAGGTACACATCCATCACATTTGGTCA CTGCTTTCCCAGATATAGCACATGGCACATCATTTGTCTCTGACTGACGTGTGCATGAAGCAAC ACAGGATGCAAGAGTCATCAATCCTGCTCGGCCAAATGAATCTTGCTTAGCCGCAGAAGCCAGA CTCCAAACCAGATGTATGCGGTCACTGTAAAGAACGCATGCATGCAACAGAAGTGGTTCAGTAC CACACTGCAATTGCAAGGGCTCAGAAATTGAAACCATACTAAAGAGTAGCATGTAAACTCGTGA ACAAGGATTTACTGTTATAAATAAGCATCCCTTGAAGACACAAATACAAAGACCTCACAGCTCA AGCATGTGCGTGTATGCCATTGTTATTAAAACTACGTTTAAACGTCAAAACTCTAATTAGAGGT TGAAACCGTGTTTTAGCGTTTTGGTGTTCTAAACTGTAAAACACAATGTTTCATGTGTTTTAGA CCATTAGCTACTTTTGGGCCAAGTCTGTTAGTTACTTTTGGGGTCCAATCCGGCTCATGGGTGA AGTTTTGGTAAGGCACTAACCTCTCTGTTTTGGTATTTAACTTCATGTTATTGTCTGAAATTAT GATATATTGGTATTTTTCCTATGTTGTTTAAAACTACGTTTAAACTTTTGTTTAAACGTTTAAA AGTCAAAATTTTACCCATGAGCGTTTCAACATTTTATCGTTTTAATAACCTTAGTGTAGGCTAA GCCATTATAGTGCACACAAGGCATTTTCTGTTATCAGTTGCTACAGCGATGAAAAGGCAATATT ATGTAATGGATAAGAGATCTTCATTAAGACAAAAATGCAATAAGATTCATTAGTTAAGCTCCTT TCATGACACAACATATGCATAAACAACTTTTTCGATATATGTAAAGGGAAAATGCTTCACGTAC GACCCACCCGTACGACTGGAGTACGACCAACGTAATCTATAGATGTTGTTGCCTCTTATTCTGA ACTAATGAATGATGAGCCATTAGATGACCTTAGTCGTACTTGAGTCTACCATTGTAGTCGTACA TGTAGCAGTGATCTATGTAAAGACAGCAGAAGTTAACAAAAAGTGTATTGCTTTGAACAAAAAA CTCAATTCCACAATCAAAAGTACCAAAACAGTTAGTTAAGCTCTGTTTATGACACAACATATGC ATAAGCAACTTTTTCGATATATGTAAAGACAGTAGAAGTTAACAAAAAGTGTATTGCTTTTGAA CCAAAAAAACTCAGTTCCACAATCAAAAGTATCAAAACAGTCAACAAGAAATAAGAAGGCAGTA GTTACCATCTCGCCAAGTTGTGGGTATAAGTTCTGAAAAATCTCTGAGCATCTTTTATGGTTTT CGAACTATAAGCACCCCCAATGCCTAAAAGCGGTTTAGAAAGATAAATGAGAATTTATAAAGGC GTTCATAAAAAGAATGTACTATTGAACAATATGACAAAAGAATTGGATGACAAAAAAAAGCAAG CTAAAAGACTAGAGCAACGATATTGTGAGCAACATAATTCACTAAATAAGAGGAGGTGTGATGT ATTTAACAAAGTCACTAGATGAGTTCTCTTTCTTAAATTCAAAATACAAGCACATAAAGTGAAA TTCCTATCAGGGATAAAATCTATGTCAGACAGAAAGGACTGATAAACTAACAAATCTCCCACAA GCCTAGGTCAGTTTGAAATACAAACAAAACTTTTAAATCACATTTGCTGGAAAGGGAATATGGA TGAAGCAATACAAGATTCTCTGGTAAAAATAGATCCACCAAAAAAATAGCTCCATTCCTTTGAG AGCAGAATCAAATATGTTGTATTGAACTAGTGTAAAACGAATAAAACTAACCAAAATCCTTATG ATGAACCACATCATTCAAACCACGTATCAGAGGGCCGAGCACAAAACCCCTTGGAATTATATGA GTGCAAACCTTGTAGCGTTCCCATGCAATATCCAAAAAGGATTGCATAACCAGGCATCTCACTG CAAAAAAATGTTCAAGCTGGCAAATTATGAAATAACATTCTAAAATATATTGAACACAGATAAC TATATATCAGTATTCACCTTGAGGATTCTCATGACTGAACCCACGCTCCCACAAAACTGCCATC CAGTACAAAATTCTTTCCCAAGATTCCATCTGAGCATGAAAGGCTCCACAGGAGGTGTGATTTA GATAGTCATTTTGTAGCGTACACTCAAACAGCCGCACTAC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.105072244

Conservation Information
Conserved circRNAs	NA
PMCS	0.105072244

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							714657-711237(-)
711337-714729(-)
						
					

						Potential amino acid sequence
						
							MESWERILYWMAVLWERGFSHENPQVRCLVMQSFLDIAWERYKVCTHIIPRGFVLGPLIRGLND
VVHHKDFGIGGAYSSKTIKDAQRFFRTYTHNLARCDRIHLVWSLASAAKQDSFGRAGLMTLASC
VASCTRQSETNDVPCAISGKAVTKCDGCVPTEVRPTDLLDVLWILSERSKQHFNPKYRLKVCEQ
VIQVATSLINATEIPLNQLLHFIATIPREFTDYIGPLRVVVQKWFFQKEECSPGDTLLSKLIDF
SATFVSQKRNEGSNVFDDEDVDAWEAEARRWARTLLLVTEEEEHLKRIFRFLEAYGYKLSEQCP
SGDFIPIKFFIIVLSFIEELELRQRKLVCRSNTILRGSDTLNGLVLDDLNKMFTESLLLILENM
VAFSKLSCSIFWLDVDNKDLPPSIKGKLGGPSQRRLATSITSSVLQGVVRLFECTLQNDYLNHT
SCGAFHAQMESWERILYWMAVLWERGFSHENPQVRCLVMQSFLDIAWERYKVCTHIIPRGFVLG
PLIRGLNDVVHHKDFGIGGAYSSKTIKDAQRFFRTYTHNLARCDRIHLVWSLASAAKQDSFGRA
GLMTLASCVASCTRQSETNDVPCAISGKAVTKCDGCVPTEVRPTDLLDVLWILSERSKQHFNPK
YRLKVCEQVIQVATSLINATEIPLNQLLHFIATIPREFTDYIGPLRVVVQKWFFQKEECSPGDT
LLSKLIDFSATFVSQKRNEGSNVFDDEDVDAWEAEARRWARTLLLVTEEEEHLKRIFRFLEAYG
YKLSEQCPSGDFIPIKFFIIVLSFIEELELRQRKLVCRSNTILRGSDTLNGLVLDDLNKMFTES
LLLILENMVAFSKLSCSIFWLDVDNKDLPPSIKGKLGGPSQRRLATSITSSVLQGVVRLFECTL
QNDYLNHTSCGAFHAQMESWERILYWMAVLWERGFSHENPQVRCLVMQSFLDIAWERYKVCTHI
IPRGFVLGPLIRGLNDVVHHKDFGIGGAYSSKTIKDAQRFFRTYTHNLARCDRIHLVWSLASAA
KQDSFGRAGLMTLASCVASCTRQSETNDVPCAISGKAVTKCDGCVPTEVRPTDLLDVLWILSER
SKQHFNPKYRLKVCEQVIQVATSLINATEIPLNQLLHFIATIPREFTDYIGPLRVVVQKWFFQK
EECSPGDTLLSKLIDFSATFVSQKRNEGSNVFDDEDVDAWEAEARRWARTLLLVTEEEEHLKRI
FRFLEAYGYKLSEQCPSGDFIPIKFFIIVLSFIEELELRQRKLVCRSNTILRGSDTLNGLVLDD
LNKMFTESLLLILENMVAFSKLSCSIFWLDVDNKDLPPSIKGKLGGPSQRRLATSITSSVLQGV
VRLFECTLQNDYLNHTSCGAFHAQMESWERILYWMAVLWERGFSHENPQVRCLVMQSFLDIAWE
RYKVCTHIIPRGFVLGPLIRGLNDVVHHKDFGIGGAYSSKTIKDAQRFFRTYTHNLARCDRIHL
VWSLASAAKQDSFGRAGLMTLASCVASCTRQSETNDVPCAISGKAVTKCDGCVPTEVRPTDLLD
VLWILSERSKQHFNPKYRLKVCEQVIQVATSLINATEIPLNQLLHFIATIPREFTDYIGPLRVV
VQKWFFQKEECSPGDTLLSKLIDFSATFVSQKRNEGSNVFDDEDVDAWEAEARRWARTLLLVTE
EEEHLKRIFRFLEAYGYKLSEQCPSGDFIPIKFFIIVLSFIEELELRQRKLVCRSNTILRGSDT
LNGLVLDDLNKMFTESLLLILENMVAFSKLSCSIFWLDVDNKDLPPSIKGKLGGPSQRRLATSI
TSSVLQG(-)
MWTTRIYPLLSKESLEAQASVVWLPPLLLQYYRV*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	714657-711237(-) 711337-714729(-)
Potential amino acid sequence	MESWERILYWMAVLWERGFSHENPQVRCLVMQSFLDIAWERYKVCTHIIPRGFVLGPLIRGLND VVHHKDFGIGGAYSSKTIKDAQRFFRTYTHNLARCDRIHLVWSLASAAKQDSFGRAGLMTLASC VASCTRQSETNDVPCAISGKAVTKCDGCVPTEVRPTDLLDVLWILSERSKQHFNPKYRLKVCEQ VIQVATSLINATEIPLNQLLHFIATIPREFTDYIGPLRVVVQKWFFQKEECSPGDTLLSKLIDF SATFVSQKRNEGSNVFDDEDVDAWEAEARRWARTLLLVTEEEEHLKRIFRFLEAYGYKLSEQCP SGDFIPIKFFIIVLSFIEELELRQRKLVCRSNTILRGSDTLNGLVLDDLNKMFTESLLLILENM VAFSKLSCSIFWLDVDNKDLPPSIKGKLGGPSQRRLATSITSSVLQGVVRLFECTLQNDYLNHT SCGAFHAQMESWERILYWMAVLWERGFSHENPQVRCLVMQSFLDIAWERYKVCTHIIPRGFVLG PLIRGLNDVVHHKDFGIGGAYSSKTIKDAQRFFRTYTHNLARCDRIHLVWSLASAAKQDSFGRA GLMTLASCVASCTRQSETNDVPCAISGKAVTKCDGCVPTEVRPTDLLDVLWILSERSKQHFNPK YRLKVCEQVIQVATSLINATEIPLNQLLHFIATIPREFTDYIGPLRVVVQKWFFQKEECSPGDT LLSKLIDFSATFVSQKRNEGSNVFDDEDVDAWEAEARRWARTLLLVTEEEEHLKRIFRFLEAYG YKLSEQCPSGDFIPIKFFIIVLSFIEELELRQRKLVCRSNTILRGSDTLNGLVLDDLNKMFTES LLLILENMVAFSKLSCSIFWLDVDNKDLPPSIKGKLGGPSQRRLATSITSSVLQGVVRLFECTL QNDYLNHTSCGAFHAQMESWERILYWMAVLWERGFSHENPQVRCLVMQSFLDIAWERYKVCTHI IPRGFVLGPLIRGLNDVVHHKDFGIGGAYSSKTIKDAQRFFRTYTHNLARCDRIHLVWSLASAA KQDSFGRAGLMTLASCVASCTRQSETNDVPCAISGKAVTKCDGCVPTEVRPTDLLDVLWILSER SKQHFNPKYRLKVCEQVIQVATSLINATEIPLNQLLHFIATIPREFTDYIGPLRVVVQKWFFQK EECSPGDTLLSKLIDFSATFVSQKRNEGSNVFDDEDVDAWEAEARRWARTLLLVTEEEEHLKRI FRFLEAYGYKLSEQCPSGDFIPIKFFIIVLSFIEELELRQRKLVCRSNTILRGSDTLNGLVLDD LNKMFTESLLLILENMVAFSKLSCSIFWLDVDNKDLPPSIKGKLGGPSQRRLATSITSSVLQGV VRLFECTLQNDYLNHTSCGAFHAQMESWERILYWMAVLWERGFSHENPQVRCLVMQSFLDIAWE RYKVCTHIIPRGFVLGPLIRGLNDVVHHKDFGIGGAYSSKTIKDAQRFFRTYTHNLARCDRIHL VWSLASAAKQDSFGRAGLMTLASCVASCTRQSETNDVPCAISGKAVTKCDGCVPTEVRPTDLLD VLWILSERSKQHFNPKYRLKVCEQVIQVATSLINATEIPLNQLLHFIATIPREFTDYIGPLRVV VQKWFFQKEECSPGDTLLSKLIDFSATFVSQKRNEGSNVFDDEDVDAWEAEARRWARTLLLVTE EEEHLKRIFRFLEAYGYKLSEQCPSGDFIPIKFFIIVLSFIEELELRQRKLVCRSNTILRGSDT LNGLVLDDLNKMFTESLLLILENMVAFSKLSCSIFWLDVDNKDLPPSIKGKLGGPSQRRLATSI TSSVLQG(-) MWTTRIYPLLSKESLEAQASVVWLPPLLLQYYRV*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ma et al., 2021b

circRNA

Detail information of Zm00001d027259_circ_g.3

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