Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | AT1G20060_circ_g.1 |
ID in PlantcircBase | ath_circ_003496 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr1: 6952306-6952571 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | PcircRNA_finder |
Parent gene | AT1G20060 |
Parent gene annotation |
ATP binding microtubule motor family protein |
Parent gene strand | - |
Alternative splicing | NA |
Support reads | 4 |
Tissues | inflorescences |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT1G20060.1:2 AT1G20060.6:2 AT1G20060.4:2 AT1G20060.7:2 AT1G20060.8:2 AT1G20060.9:1 AT1G20060.3:1 AT1G20060.10:2 AT1G20060.5:2 AT1G20060.2:2 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.31838506 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Chu et al., 2017 |