Plant Circular RNA Database

Detail information of Csa1G123490_circ_g.3

			
						 General Information
					
						CircRNA Name
						Csa1G123490_circ_g.3
					
						ID in PlantcircBase
						csa_circ_000281
					
						Alias
						Chr1:9196282_9201183
					
						Organism
						
							Cucumis sativus						
					
						Position
						
							chrChr1: 9196282-9201183  JBrowse»						
					
						Reference genome
						
							Cucumis sativus v1.5						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRI2;Find_circ
					
						Parent gene
						
							Csa1G123490						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						+
					
						Alternative splicing
						
							Csa1G123490_circ_g.7 Csa1G123490_circ_g.8 						
					
						Support reads
						NA
					
						Tissues
						leaf,root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Csa1G123490.2:4
Csa1G123490.1:4

General Information
CircRNA Name	Csa1G123490_circ_g.3
ID in PlantcircBase	csa_circ_000281
Alias	Chr1:9196282_9201183
Organism	Cucumis sativus
Position	chrChr1: 9196282-9201183 JBrowse»
Reference genome	Cucumis sativus v1.5
Type	e-circRNA
Identification method	CIRI2;Find_circ
Parent gene	Csa1G123490
Parent gene annotation	NA
Parent gene strand	+
Alternative splicing	Csa1G123490_circ_g.7 Csa1G123490_circ_g.8
Support reads	NA
Tissues	leaf,root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Csa1G123490.2:4 Csa1G123490.1:4

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AAGTTCACTTGATGGCCAAGGTCTTATGAAAAATTATGAAAGCCGCTGTGAAAGAGCTAAGTTG
GCCTCCCATGTCTCAGAAGTGGATGAGAAACACGAGgatagagggaagtccatgggcaattcca
tctcagatcctactggaaattgtgtttggtgtaagctggaaaaagcatccttggacatcgaccc
aaatgcat

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 753
Transcript exons: 9196282-9196412,9197881-9198074,9198260-9198390,9200887-
9201183
GATAGAGGGAAGTCCATGGGCAATTCCATCTCAGATCCTACTGGAAATTGTGTTTGGTGTAAGC
TGGAAAAAGCATCCTTGGACATCGACCCAAATGCATGCCTCATCTGCAAAGTTGGGGGAAAACT
CTTATGCTGTGAAGGAAAAGAATGCAGAAGAAGCTTCCATCTTTCTTGTCTAGATCCTCCCTTG
GAGGATGTTCCCCTTGGAGTTTGGCACTGTCCAATGTGTATTAGAAGGAAGATCAAGTTCGGTG
TATATGCTGTGTCAAAGGGCTTCGAATCCATCTGGGATACAAGAGAAACAGAGATATCGGATGC
CGATGGGTCGCAAAGGCAGAAGCAATATTTTGTGAAATTTAAAGATCTTGCTCATGCTCATAAT
CGTTGGTTACCTGAGAGCAAATTGCTTTTAGAAGCCTCAAGCCTTGTTTCAAGATTCATCAAGA
AGAATCAGTATTCAAGGTGGAAGGAAGAGTGGGCTATTCCACAGCGTTTGTTACAGAAGAGATT
GTTATTGTCTGCTAAGCTATGCGAGGAGCATGATGCGGAATTTTCTGGGGCTGAGTTGAATTGT
CGATATGAGTGGCTTGTTAAATGGCGAGGCCTTGATTACAAATTTGCAACATGGGAGTTGGGAA
ATGCTTCATTCTTAAGTTCACTTGATGGCCAAGGTCTTATGAAAAATTATGAAAGCCGCTGTGA
AAGAGCTAAGTTGGCCTCCCATGTCTCAGAAGTGGATGAGAAACACGAG
						
					

						Genomic sequence
						
							GATAGAGGGAAGTCCATGGGCAATTCCATCTCAGATCCTACTGGAAATTGTGTTTGGTGTAAGC
TGGAAAAAGCATCCTTGGACATCGACCCAAATGCATGCCTCATCTGCAAAGTTGGGGGAAAACT
CTTGTGGGTACTATTTTATTGATTTATCATATTGTTTTCCTGAACATTTATTTTGTATGAAAAC
CATTTGGTTGGAGGGAATTTATTTTGTTGGTGAGTTTGATCAGGAATGTTGTGATTGTCGAGGA
AAACATTTAAAAAAGGATCGGTGATAGAAGATATTGCAAAATTGATTGATGGAAATTTGATAGA
ACACCAATAAATGTGTTCTTATTCAATTGATTTAAACTCACTATTACAAAGAAGAATTGATATG
AAATGAAAATACAGAAATTAACTAAGAACAAGTAAAAGACTTCTCTCTCTGCCTATCCTCTCTC
TCAAGGAAGAGTGCAGAAAGACTACCCTCAAAACTGATTTTCCCCCTTTTCTTCCCTCCCCAAC
TTCCTATTTATAACCATCTAACTGCCTACATAACTAACTACCCTTAGCCCTATACTATTCTAGG
TATCTATCAGATATATAATCTCCTAGCCTCCCACCCTCTTGGATGGAGGTTTGTCTCCGTTAAA
AAAAGGGATAATTTGGGATGTGATCTTTACTGCCTTTGGATGGAACATTGTACTACCAGCACAT
TCCAAAGAATGGCTTTAGTTGCTTCTATATAACCACCATTTCAAGTCGACAAAAGCCACTTTAT
GGCCCTTCATAGTTAAAGTAATCATCTAAAGGATTTGGACTAAGAAAAAGTTGAGGGTTTTTCG
ATTGTGAATTCCACAATAGACGCCTTTTAATCATGAGGTTAACCCATCCTTGATGCCTTCCACA
ATAAGCATCTTTTTCCTCCATAATGATTCCTTTTCTACTTAGCCCCATTTTCTTTTCTTTCCCT
GTCTTTTTCTTTGTTGCTTAACCCATCCTTTTTCCTCCTCCCTCTTCTTCTTTGTTGTCAGCCC
CATCTGTCACCACCAAGTCTCTATTATTTCCATGGAGCTGGTGAGGTGCGGTATCCTTAACCTT
CACTTTTGCATCTGTTTGAAAACGATGAGTTTTGTTGTAGGCATGAAGAAAAAGAAGAAAAGAA
AATTCCACTCTTTCCCTTATTTGATTTGGTTTGACAATTCTCTTGCTGAATGAATGCAACTTCC
AATTCTAGTTCCTATATGTTTTTCCTAAGAAAGTTAGGGATGCTTCTGAGACTATTTGTTTGGC
CAAGTTTAGATCTCCACTAAAATGGAAACTCGAATGTGTTGTTTAGCCACCTTTGGAGGTGGAG
AGATATTACTGAAGTATGTTCCAATTTGTCTTATTATAAAAAACCCAAGAAATCTTAAAGATCT
TGAATAGAGAAGACTGAGGACATGCATATGAGGATGACACATGAGAGAATTCCGGTTTCTGTTA
CAACATATGGGCATTCCTACTGATTTTTAGCATGCATATAGCTGTTCTAAACTGTAACTATATT
GAAACTGAAGTCATCTTGCTGATTGGTTTCCATATGCCTGTCTTGTTTTGCATTTACTTTAAGA
TGCTGTGAAGGAAAAGAATGCAGAAGAAGCTTCCATCTTTCTTGTCTAGATCCTCCCTTGGAGG
ATGTTCCCCTTGGAGTTTGGCACTGTCCAATGTGTATTAGAAGGAAGATCAAGTTCGGTGTATA
TGCTGTGTCAAAGGGCTTCGAATCCATCTGGGATACAAGAGAAACAGAGATATCGGATGCCGAT
GGTATGGTCTACTTAGTGATTCAATCTTACACATGTAATAGTAATTGCTTGTAGATGTTCAAGA
CACAGCTTTCTTATGATTTTTGTTTTAATCTTTTTTTGTGTCATTTTTAGTTTTTCCTCATTTT
TATATGATCGAAAATTATATAATTTTTTTTAGATTCTTTATCTGTTATTGTCTTCAAGGGTCGC
AAAGGCAGAAGCAATATTTTGTGAAATTTAAAGATCTTGCTCATGCTCATAATCGTTGGTTACC
TGAGAGCAAATTGCTTTTAGAAGCCTCAAGCCTTGTTTCAAGATTCATCAAGAAGAATCAGGTT
TTGAATTGTTCTTTCTAAAAGTTTATGTCTCGTTCAATTAGAAGTTAATGTTCTTAATTGATTG
ATATTTAGCTTGTGGAATTCAATGTCACAATATTTAGCATAGCTCAACGGGCTCATTCAAGAGC
TGGACCTCTTTTTTTTTTAATAATTCCTTAGAAGTGTTCTGGTCATTCATCCAAAAACCACAGT
ATCGTTGGTCTATTTTAGGTTTGTTTCGTTGTTATGCCCTTCTATGGGTATTCGTATCTTTTAG
AATTAGTCCTATTTCATTGTATTGATGAAAAGTTCTTTTTATCAATTGTTCTATATTATAATAA
TTTTTTTTAAAGTAATAAATAATAGAACTTAACTTTTTATAATTTGATGTATAAATACATGTAC
TACATGTTTATTTAATAATTTTTAAAGGATTATCAATTAGAAATTTAAGGGGGATGTCAACCTA
GTTGAGATGCTTGGGTGTGCCTCTTGATCCTTAGGTTTTCTTCCCTTTGTATAATCCTCTTGTA
TTGTACTTTGAGCAATAGTCTCCTTTTATTATATTAATAAAGAGATTTGTTTCCATTTAAAAAA
AAATTAGAAATCTAAGTAACTGACAATCTAAGTAATCAAAGTATCAACTAAAAATCTTAGTGTT
TTTTATCCTTTATTTTGTTTGGACTGCTTTTGTTTTGATTATTTTATGGATATGATGAGGGTGC
TAAGGGGGTGTCAACCTAGTTGCGATTCCTGGGTGCATCTCGTAATCCCTAGGTTATTTTTGCT
CTTTTGTTTCTCTTTCTTGTACTTGGAGCAATATTCTCATTTCATTATTTCAATGAAGAGGCTT
TTTTCTGGATGCGTCCCTTGATCCTTAGGTCTCTATTTTTGTACTCTCTTAGTATATACCTCTT
GTACATTGAGTTATGAATCTTAATAAAGAGGTTGTCTTCTTTTCAAAAAAAAAAAAAGAGGCAT
TTTTCTGTTAAAAAAGGATTATCAATTAGATATCCAGTCATTTTTATGAGGCCTGGATTTTGTT
AAATCAGTAATAGGGTAGGGGCATTTAGGGCCTATTGCTATACAATTTCAAAACGTAATTTTTT
GTTTTGGGATAAGAAACCATTTCATTCAACAAATGCCCAAGTACAAGATGAAACAAGGGAGCAA
CCCCGTTGAAAGAAGGAAAAATACAATGATACCATAGGGGAGGAGGGAAGATGTAAAGGGGGAA
AATACAGAAAGATGTAAAATGGATTTATGATGCAAGAAGCCCAAAAAAATTGAACAGACCAAAC
AAAACAACAATTTAAAAGACATTAAACCAAAACACATCCCCAAGCGAAACATAGTCAAATCATC
GTCTGATGAGTAAAATATGATGGTAGAGGGAGAGAAAGTGTCTGAGGATTGGAGAGCTAGATTC
AGGCCAATAATGAATGGAACTTCTTTTTTTTTTTAAGAGATCGAGAACTCCAAGTTCCGGATTT
CTCTGATGTTTTCGTGATCCCAGTCCATGGTGTCAAAGGCTTTATTAAGAGGCATGCTCTTTTA
CTGTGAAATCTTGTCAGTTGTTTTGATTCAATTTATCTCTTACCTTTTTATGGGGGATTCTATC
TCAAGTTTTTGTCCTTCTTAGTTGAAAATTTTGTCTCTCTTTTTGTTTTTGAAACAGAAACATA
ATTTTTTATTATTGAAATGAAAAGAGAAATTACATTAACATAGAAACTTGGGATCAGTATACCT
ACTAGATATCTCAACTAGGTTGAAACAACCATAACACCCTCATCACATCCCTATACAAAGAAAA
TCCTCCATAGTTTTGAGAGTATGTCTAGAGAATATGGTTACAATGACATGGAGAAAATAAAAGC
ATTCCAATTAAGACAAATATCCTGAAAAAAGTAATAAGCAAAGGACTTTGATTGGGAACTCCAA
GAAGAAGCCAGTAAACGAGTAGAACTGAAGTGATCTAACCAGTTCGACGGCCTATCATGAAAAA
CTCTCTGATTTCTTTCTAATGAAGATTCTGTGTCCTATTTGGCTTGTATTATCTACATATCAGT
TGTATTGGTCTTCTAATTGTAGGTCTTGTTTTTTTTTTGTTTGTTAATAAAAGCAACAACTTTC
ATTGAGAAGAAAATGAAAGAGTACAAGGGCAACAAAAAAACAAGCCCTCCAAAACACCCCGACT
AAAGGAAGGGGGGGGGGGTTCCAACTAAGTAAATCTAATTGTAGGTCTCTTTTTTCATTACATG
AATGGAATTTTTTGTTTTCTTAAAAAAAAAAAAAAAAGAAAGTAAAAACATTGAGCCACTACCA
TGCCATCTGTTTTTTTGTGATATATTTTTTAGAATCTTCTCCAACTAGCTCCTTTTGTGAAGGA
TTATATCTTGAATGGGATGAGTATGGGCCATGGTAAACAGTCTGCATTTGCAATTTAGTGTTGT
TATTTTATATTTTATTTATTAAGATGAATCTTTCTCCAATTTGATGACAATCTTCTTTCAGTAT
TCAAGGTGGAAGGAAGAGTGGGCTATTCCACAGCGTTTGTTACAGAAGAGATTGTTATTGTCTG
CTAAGCTATGCGAGGAGCATGATGCGGAATTTTCTGGGGCTGAGTTGAATTGTCGATATGAGTG
GCTTGTTAAATGGCGAGGCCTTGATTACAAATTTGCAACATGGGAGTTGGGAAATGCTTCATTC
TTAAGTTCACTTGATGGCCAAGGTCTTATGAAAAATTATGAAAGCCGCTGTGAAAGAGCTAAGT
TGGCCTCCCATGTCTCAGAAGTGGATGAGAAACACGAG
						
					

			
		

Sequences
Splice junction sequence	AAGTTCACTTGATGGCCAAGGTCTTATGAAAAATTATGAAAGCCGCTGTGAAAGAGCTAAGTTG GCCTCCCATGTCTCAGAAGTGGATGAGAAACACGAGgatagagggaagtccatgggcaattcca tctcagatcctactggaaattgtgtttggtgtaagctggaaaaagcatccttggacatcgaccc aaatgcat
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 753 Transcript exons: 9196282-9196412,9197881-9198074,9198260-9198390,9200887- 9201183 GATAGAGGGAAGTCCATGGGCAATTCCATCTCAGATCCTACTGGAAATTGTGTTTGGTGTAAGC TGGAAAAAGCATCCTTGGACATCGACCCAAATGCATGCCTCATCTGCAAAGTTGGGGGAAAACT CTTATGCTGTGAAGGAAAAGAATGCAGAAGAAGCTTCCATCTTTCTTGTCTAGATCCTCCCTTG GAGGATGTTCCCCTTGGAGTTTGGCACTGTCCAATGTGTATTAGAAGGAAGATCAAGTTCGGTG TATATGCTGTGTCAAAGGGCTTCGAATCCATCTGGGATACAAGAGAAACAGAGATATCGGATGC CGATGGGTCGCAAAGGCAGAAGCAATATTTTGTGAAATTTAAAGATCTTGCTCATGCTCATAAT CGTTGGTTACCTGAGAGCAAATTGCTTTTAGAAGCCTCAAGCCTTGTTTCAAGATTCATCAAGA AGAATCAGTATTCAAGGTGGAAGGAAGAGTGGGCTATTCCACAGCGTTTGTTACAGAAGAGATT GTTATTGTCTGCTAAGCTATGCGAGGAGCATGATGCGGAATTTTCTGGGGCTGAGTTGAATTGT CGATATGAGTGGCTTGTTAAATGGCGAGGCCTTGATTACAAATTTGCAACATGGGAGTTGGGAA ATGCTTCATTCTTAAGTTCACTTGATGGCCAAGGTCTTATGAAAAATTATGAAAGCCGCTGTGA AAGAGCTAAGTTGGCCTCCCATGTCTCAGAAGTGGATGAGAAACACGAG
Genomic sequence	GATAGAGGGAAGTCCATGGGCAATTCCATCTCAGATCCTACTGGAAATTGTGTTTGGTGTAAGC TGGAAAAAGCATCCTTGGACATCGACCCAAATGCATGCCTCATCTGCAAAGTTGGGGGAAAACT CTTGTGGGTACTATTTTATTGATTTATCATATTGTTTTCCTGAACATTTATTTTGTATGAAAAC CATTTGGTTGGAGGGAATTTATTTTGTTGGTGAGTTTGATCAGGAATGTTGTGATTGTCGAGGA AAACATTTAAAAAAGGATCGGTGATAGAAGATATTGCAAAATTGATTGATGGAAATTTGATAGA ACACCAATAAATGTGTTCTTATTCAATTGATTTAAACTCACTATTACAAAGAAGAATTGATATG AAATGAAAATACAGAAATTAACTAAGAACAAGTAAAAGACTTCTCTCTCTGCCTATCCTCTCTC TCAAGGAAGAGTGCAGAAAGACTACCCTCAAAACTGATTTTCCCCCTTTTCTTCCCTCCCCAAC TTCCTATTTATAACCATCTAACTGCCTACATAACTAACTACCCTTAGCCCTATACTATTCTAGG TATCTATCAGATATATAATCTCCTAGCCTCCCACCCTCTTGGATGGAGGTTTGTCTCCGTTAAA AAAAGGGATAATTTGGGATGTGATCTTTACTGCCTTTGGATGGAACATTGTACTACCAGCACAT TCCAAAGAATGGCTTTAGTTGCTTCTATATAACCACCATTTCAAGTCGACAAAAGCCACTTTAT GGCCCTTCATAGTTAAAGTAATCATCTAAAGGATTTGGACTAAGAAAAAGTTGAGGGTTTTTCG ATTGTGAATTCCACAATAGACGCCTTTTAATCATGAGGTTAACCCATCCTTGATGCCTTCCACA ATAAGCATCTTTTTCCTCCATAATGATTCCTTTTCTACTTAGCCCCATTTTCTTTTCTTTCCCT GTCTTTTTCTTTGTTGCTTAACCCATCCTTTTTCCTCCTCCCTCTTCTTCTTTGTTGTCAGCCC CATCTGTCACCACCAAGTCTCTATTATTTCCATGGAGCTGGTGAGGTGCGGTATCCTTAACCTT CACTTTTGCATCTGTTTGAAAACGATGAGTTTTGTTGTAGGCATGAAGAAAAAGAAGAAAAGAA AATTCCACTCTTTCCCTTATTTGATTTGGTTTGACAATTCTCTTGCTGAATGAATGCAACTTCC AATTCTAGTTCCTATATGTTTTTCCTAAGAAAGTTAGGGATGCTTCTGAGACTATTTGTTTGGC CAAGTTTAGATCTCCACTAAAATGGAAACTCGAATGTGTTGTTTAGCCACCTTTGGAGGTGGAG AGATATTACTGAAGTATGTTCCAATTTGTCTTATTATAAAAAACCCAAGAAATCTTAAAGATCT TGAATAGAGAAGACTGAGGACATGCATATGAGGATGACACATGAGAGAATTCCGGTTTCTGTTA CAACATATGGGCATTCCTACTGATTTTTAGCATGCATATAGCTGTTCTAAACTGTAACTATATT GAAACTGAAGTCATCTTGCTGATTGGTTTCCATATGCCTGTCTTGTTTTGCATTTACTTTAAGA TGCTGTGAAGGAAAAGAATGCAGAAGAAGCTTCCATCTTTCTTGTCTAGATCCTCCCTTGGAGG ATGTTCCCCTTGGAGTTTGGCACTGTCCAATGTGTATTAGAAGGAAGATCAAGTTCGGTGTATA TGCTGTGTCAAAGGGCTTCGAATCCATCTGGGATACAAGAGAAACAGAGATATCGGATGCCGAT GGTATGGTCTACTTAGTGATTCAATCTTACACATGTAATAGTAATTGCTTGTAGATGTTCAAGA CACAGCTTTCTTATGATTTTTGTTTTAATCTTTTTTTGTGTCATTTTTAGTTTTTCCTCATTTT TATATGATCGAAAATTATATAATTTTTTTTAGATTCTTTATCTGTTATTGTCTTCAAGGGTCGC AAAGGCAGAAGCAATATTTTGTGAAATTTAAAGATCTTGCTCATGCTCATAATCGTTGGTTACC TGAGAGCAAATTGCTTTTAGAAGCCTCAAGCCTTGTTTCAAGATTCATCAAGAAGAATCAGGTT TTGAATTGTTCTTTCTAAAAGTTTATGTCTCGTTCAATTAGAAGTTAATGTTCTTAATTGATTG ATATTTAGCTTGTGGAATTCAATGTCACAATATTTAGCATAGCTCAACGGGCTCATTCAAGAGC TGGACCTCTTTTTTTTTTAATAATTCCTTAGAAGTGTTCTGGTCATTCATCCAAAAACCACAGT ATCGTTGGTCTATTTTAGGTTTGTTTCGTTGTTATGCCCTTCTATGGGTATTCGTATCTTTTAG AATTAGTCCTATTTCATTGTATTGATGAAAAGTTCTTTTTATCAATTGTTCTATATTATAATAA TTTTTTTTAAAGTAATAAATAATAGAACTTAACTTTTTATAATTTGATGTATAAATACATGTAC TACATGTTTATTTAATAATTTTTAAAGGATTATCAATTAGAAATTTAAGGGGGATGTCAACCTA GTTGAGATGCTTGGGTGTGCCTCTTGATCCTTAGGTTTTCTTCCCTTTGTATAATCCTCTTGTA TTGTACTTTGAGCAATAGTCTCCTTTTATTATATTAATAAAGAGATTTGTTTCCATTTAAAAAA AAATTAGAAATCTAAGTAACTGACAATCTAAGTAATCAAAGTATCAACTAAAAATCTTAGTGTT TTTTATCCTTTATTTTGTTTGGACTGCTTTTGTTTTGATTATTTTATGGATATGATGAGGGTGC TAAGGGGGTGTCAACCTAGTTGCGATTCCTGGGTGCATCTCGTAATCCCTAGGTTATTTTTGCT CTTTTGTTTCTCTTTCTTGTACTTGGAGCAATATTCTCATTTCATTATTTCAATGAAGAGGCTT TTTTCTGGATGCGTCCCTTGATCCTTAGGTCTCTATTTTTGTACTCTCTTAGTATATACCTCTT GTACATTGAGTTATGAATCTTAATAAAGAGGTTGTCTTCTTTTCAAAAAAAAAAAAAGAGGCAT TTTTCTGTTAAAAAAGGATTATCAATTAGATATCCAGTCATTTTTATGAGGCCTGGATTTTGTT AAATCAGTAATAGGGTAGGGGCATTTAGGGCCTATTGCTATACAATTTCAAAACGTAATTTTTT GTTTTGGGATAAGAAACCATTTCATTCAACAAATGCCCAAGTACAAGATGAAACAAGGGAGCAA CCCCGTTGAAAGAAGGAAAAATACAATGATACCATAGGGGAGGAGGGAAGATGTAAAGGGGGAA AATACAGAAAGATGTAAAATGGATTTATGATGCAAGAAGCCCAAAAAAATTGAACAGACCAAAC AAAACAACAATTTAAAAGACATTAAACCAAAACACATCCCCAAGCGAAACATAGTCAAATCATC GTCTGATGAGTAAAATATGATGGTAGAGGGAGAGAAAGTGTCTGAGGATTGGAGAGCTAGATTC AGGCCAATAATGAATGGAACTTCTTTTTTTTTTTAAGAGATCGAGAACTCCAAGTTCCGGATTT CTCTGATGTTTTCGTGATCCCAGTCCATGGTGTCAAAGGCTTTATTAAGAGGCATGCTCTTTTA CTGTGAAATCTTGTCAGTTGTTTTGATTCAATTTATCTCTTACCTTTTTATGGGGGATTCTATC TCAAGTTTTTGTCCTTCTTAGTTGAAAATTTTGTCTCTCTTTTTGTTTTTGAAACAGAAACATA ATTTTTTATTATTGAAATGAAAAGAGAAATTACATTAACATAGAAACTTGGGATCAGTATACCT ACTAGATATCTCAACTAGGTTGAAACAACCATAACACCCTCATCACATCCCTATACAAAGAAAA TCCTCCATAGTTTTGAGAGTATGTCTAGAGAATATGGTTACAATGACATGGAGAAAATAAAAGC ATTCCAATTAAGACAAATATCCTGAAAAAAGTAATAAGCAAAGGACTTTGATTGGGAACTCCAA GAAGAAGCCAGTAAACGAGTAGAACTGAAGTGATCTAACCAGTTCGACGGCCTATCATGAAAAA CTCTCTGATTTCTTTCTAATGAAGATTCTGTGTCCTATTTGGCTTGTATTATCTACATATCAGT TGTATTGGTCTTCTAATTGTAGGTCTTGTTTTTTTTTTGTTTGTTAATAAAAGCAACAACTTTC ATTGAGAAGAAAATGAAAGAGTACAAGGGCAACAAAAAAACAAGCCCTCCAAAACACCCCGACT AAAGGAAGGGGGGGGGGGTTCCAACTAAGTAAATCTAATTGTAGGTCTCTTTTTTCATTACATG AATGGAATTTTTTGTTTTCTTAAAAAAAAAAAAAAAAGAAAGTAAAAACATTGAGCCACTACCA TGCCATCTGTTTTTTTGTGATATATTTTTTAGAATCTTCTCCAACTAGCTCCTTTTGTGAAGGA TTATATCTTGAATGGGATGAGTATGGGCCATGGTAAACAGTCTGCATTTGCAATTTAGTGTTGT TATTTTATATTTTATTTATTAAGATGAATCTTTCTCCAATTTGATGACAATCTTCTTTCAGTAT TCAAGGTGGAAGGAAGAGTGGGCTATTCCACAGCGTTTGTTACAGAAGAGATTGTTATTGTCTG CTAAGCTATGCGAGGAGCATGATGCGGAATTTTCTGGGGCTGAGTTGAATTGTCGATATGAGTG GCTTGTTAAATGGCGAGGCCTTGATTACAAATTTGCAACATGGGAGTTGGGAAATGCTTCATTC TTAAGTTCACTTGATGGCCAAGGTCTTATGAAAAATTATGAAAGCCGCTGTGAAAGAGCTAAGT TGGCCTCCCATGTCTCAGAAGTGGATGAGAAACACGAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.465758838

Conservation Information
Conserved circRNAs	NA
PMCS	0.465758838

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							9196298-9201180(+)
9201120-9197927(+)
						
						Potential amino acid sequence
						
							MGNSISDPTGNCVWCKLEKASLDIDPNACLICKVGGKLLCCEGKECRRSFHLSCLDPPLEDVPL
GVWHCPMCIRRKIKFGVYAVSKGFESIWDTRETEISDADGSQRQKQYFVKFKDLAHAHNRWLPE
SKLLLEASSLVSRFIKKNQYSRWKEEWAIPQRLLQKRLLLSAKLCEEHDAEFSGAELNCRYEWL
VKWRGLDYKFATWELGNASFLSSLDGQGLMKNYESRCERAKLASHVSEVDEKHEDRGKSMGNSI
SDPTGNCVWCKLEKASLDIDPNACLICKVGGKLLCCEGKECRRSFHLSCLDPPLEDVPLGVWHC
PMCIRRKIKFGVYAVSKGFESIWDTRETEISDADGSQRQKQYFVKFKDLAHAHNRWLPESKLLL
EASSLVSRFIKKNQYSRWKEEWAIPQRLLQKRLLLSAKLCEEHDAEFSGAELNCRYEWLVKWRG
LDYKFATWELGNASFLSSLDGQGLMKNYESRCERAKLASHVSEVDEKHEDRGKSMGNSISDPTG
NCVWCKLEKASLDIDPNACLICKVGGKLLCCEGKECRRSFHLSCLDPPLEDVPLGVWHCPMCIR
RKIKFGVYAVSKGFESIWDTRETEISDADGSQRQKQYFVKFKDLAHAHNRWLPESKLLLEASSL
VSRFIKKNQYSRWKEEWAIPQRLLQKRLLLSAKLCEEHDAEFSGAELNCRYEWLVKWRGLDYKF
ATWELGNASFLSSLDGQGLMKNYESRCERAKLASHVSEVDEKHEDRGKSMGNSISDPTGNCVWC
KLEKASLDIDPNACLICKVGGKLLCCEGKECRRSFHLSCLDPPLEDVPLGVWHCPMCIRRKIKF
GVYAVSKGFESIWDTRETEISDADGSQRQKQYFVKFKDLAHAHNRWLPESKLLLEASSLVSRFI
KKNQYSRWKEEWAIPQRLLQKRLLLSAKLCEEHDAEFSGAELNCRYEWLVKWRGLDYKFATWEL
GNASFLSSLDGQGLMKNYESRCERAKLASHVSEVDEKHE
MKAAVKELSWPPMSQKWMRNTRIEGSPWAIPSQILLEIVFGVSWKKHPWTSTQMHASSAKLGEN
SYAVKEKNAEEASIFLV*
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	9196298-9201180(+) 9201120-9197927(+)
Potential amino acid sequence	MGNSISDPTGNCVWCKLEKASLDIDPNACLICKVGGKLLCCEGKECRRSFHLSCLDPPLEDVPL GVWHCPMCIRRKIKFGVYAVSKGFESIWDTRETEISDADGSQRQKQYFVKFKDLAHAHNRWLPE SKLLLEASSLVSRFIKKNQYSRWKEEWAIPQRLLQKRLLLSAKLCEEHDAEFSGAELNCRYEWL VKWRGLDYKFATWELGNASFLSSLDGQGLMKNYESRCERAKLASHVSEVDEKHEDRGKSMGNSI SDPTGNCVWCKLEKASLDIDPNACLICKVGGKLLCCEGKECRRSFHLSCLDPPLEDVPLGVWHC PMCIRRKIKFGVYAVSKGFESIWDTRETEISDADGSQRQKQYFVKFKDLAHAHNRWLPESKLLL EASSLVSRFIKKNQYSRWKEEWAIPQRLLQKRLLLSAKLCEEHDAEFSGAELNCRYEWLVKWRG LDYKFATWELGNASFLSSLDGQGLMKNYESRCERAKLASHVSEVDEKHEDRGKSMGNSISDPTG NCVWCKLEKASLDIDPNACLICKVGGKLLCCEGKECRRSFHLSCLDPPLEDVPLGVWHCPMCIR RKIKFGVYAVSKGFESIWDTRETEISDADGSQRQKQYFVKFKDLAHAHNRWLPESKLLLEASSL VSRFIKKNQYSRWKEEWAIPQRLLQKRLLLSAKLCEEHDAEFSGAELNCRYEWLVKWRGLDYKF ATWELGNASFLSSLDGQGLMKNYESRCERAKLASHVSEVDEKHEDRGKSMGNSISDPTGNCVWC KLEKASLDIDPNACLICKVGGKLLCCEGKECRRSFHLSCLDPPLEDVPLGVWHCPMCIRRKIKF GVYAVSKGFESIWDTRETEISDADGSQRQKQYFVKFKDLAHAHNRWLPESKLLLEASSLVSRFI KKNQYSRWKEEWAIPQRLLQKRLLLSAKLCEEHDAEFSGAELNCRYEWLVKWRGLDYKFATWEL GNASFLSSLDGQGLMKNYESRCERAKLASHVSEVDEKHE MKAAVKELSWPPMSQKWMRNTRIEGSPWAIPSQILLEIVFGVSWKKHPWTSTQMHASSAKLGEN SYAVKEKNAEEASIFLV*
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Zhu et al., 2019;He et al., 2020

circRNA

Detail information of Csa1G123490_circ_g.3

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