Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d024009_circ_g.9 |
ID in PlantcircBase | zma_circ_010193 |
Alias | zma_circ_0000141 |
Organism | Zea mays |
Position | chr10: 36534770-36535040 JBrowse» |
Reference genome | AGPv4.38 |
Type | e-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d024009 |
Parent gene annotation |
Chaperone protein ClpC1 chloroplastic |
Parent gene strand | + |
Alternative splicing | Zm00001d024009_circ_g.8 Zm00001d024009_circ_g.10 Zm00001d024009_circ_g.11 |
Support reads | NA |
Tissues | leaf, root |
Exon boundary | No-No |
Splicing signals | GT-AG |
Number of exons covered | Zm00001d024009_T002:1 Zm00001d024009_T001:1 Zm00001d024009_T003:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.293083456 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ma et al., 2021b |