Splice junction sequence |
GATATTTGGTGGTGTTGGTATTGCTTGCCTACCCTTGGGCCTTATCACTGCATTCATCAGGCGA CCAAAGGCTGTTATCACTCGGTCACAGTATATAAAGgagtcattgggaaggtggacttctctgt aaggcacttgtcttctgccacgactactttccctacttcatggcagttttcaaataatcaacct tgcattgg
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 326 Transcript exons: 187542-187657,187775-187885,188070-188168 GAGTCATTGGGAAGGTGGACTTCTCTGTAAGGCACTTGTCTTCTGCCACGACTACTTTCCCTAC TTCATGGCAGTTTTCAAATAATCAACCTTGCATTGGTAACACTGCTCGTCAGTGCTCAGCATAT ACAGCTAATGCTGCGTCTGAAAAGACATGGTCCATGCGTACTACGTTTCCAGAATATGTTGTTG CTCTTGCTACAATCGTTGGGTCAGTGCTCTTCACGATATTTGGTGGTGTTGGTATTGCTTGCCT ACCCTTGGGCCTTATCACTGCATTCATCAGGCGACCAAAGGCTGTTATCACTCGGTCACAGTAT ATAAAG
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Genomic sequence |
GAGTCATTGGGAAGGTGGACTTCTCTGTAAGGCACTTGTCTTCTGCCACGACTACTTTCCCTAC TTCATGGCAGTTTTCAAATAATCAACCTTGCATTGGTAACACTGCTCGTCAGGTAATACTTTAA ATTTTCTTGCATTCTTGTTATGAGTTTTTCTTTCGTTAGTCTCTATGCAAAATATATTTCAGTA TGTAAAATATCTTCTCTTCTCCTTGGTATATTGATCGGCAGTGCTCAGCATATACAGCTAATGC TGCGTCTGAAAAGACATGGTCCATGCGTACTACGTTTCCAGAATATGTTGTTGCTCTTGCTACA ATCGTTGGGTCAGTGCTCTTCACGGTATGTACATCTCTCTATTAGGTGTTTTGTGTTAAAAGTT TCACCTCATTGTCTTGGAAGGCATATAATCTTTCTCATATTAAGGCTTGGTTGTGTTCTCTTGC AGTTAAAAGACTTTTGGTAGCTGTGATTTTTTGCTTTCCTCTAAAGATTCTGAGAAACTCTTTT ATCTCAAATGTTGTAGATATTTGGTGGTGTTGGTATTGCTTGCCTACCCTTGGGCCTTATCACT GCATTCATCAGGCGACCAAAGGCTGTTATCACTCGGTCACAGTATATAAAG |