Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G16560_circ_g.2 |
ID in PlantcircBase | ath_circ_002920 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr1: 5669163-5670110 JBrowse» |
Reference genome | TAIR10.38 |
Type | ue-circRNA |
Identification method | circRNA_finder, find_circ |
Parent gene | AT1G16560 |
Parent gene annotation |
AT1G16560 protein |
Parent gene strand | + |
Alternative splicing | NA |
Support reads | 2 |
Tissues | whole_plant |
Exon boundary | No-No |
Splicing signals | CT-AC |
Number of exons covered | AT1G16560.4:4 AT1G16560.9:4 AT1G16560.5:4 AT1G16560.2:4 AT1G16560.1:4 AT1G16560.8:4 AT1G16560.6:4 AT1G16560.3:4 AT1G16560.7:4 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.226064047 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |