Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d010639_circ_g.2 |
ID in PlantcircBase | zma_circ_009675 |
Alias | Zm08circ00047, GRMZM2G161019_C1 |
Organism | Zea mays |
Position | chr8: 122784154-122784432 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | CIRI2 |
Parent gene | Zm00001d010639 |
Parent gene annotation |
Endoplasmic reticulum vesicle transporter protein |
Parent gene strand | + |
Alternative splicing | Zm00001d010639_circ_g.1 |
Support reads | NA |
Tissues | leaf, endosperm |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | Zm00001d010639_T003:2 Zm00001d010639_T002:2 Zm00001d010639_T001:2 Zm00001d010639_T004:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.340970881 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | responsive to drought stress |
Other Information | |
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References | Han et al., 2020;Zhang et al., 2019 |