Detail information of BGIOSGA002706_circ_g.2


General Information
CircRNA Name BGIOSGA002706_circ_g.2
ID in PlantcircBase osi_circ_001786
Alias 1:2095669|2095860
Organism Oryza sativa ssp. indica
Position chr1: 2095669-2095860  JBrowse»
Reference genome Oryza_indica.ASM465v1.42
Type   e-circRNA
Identification method find_circ
Parent gene BGIOSGA002706
Parent gene annotation NA
Parent gene strand +
Alternative splicing BGIOSGA002706_circ_g.1
Support reads NA
Tissues leaf
Exon boundary   No-No
Splicing signals   GT-AG
Number of exons covered BGIOSGA002706-TA:1
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   GCTCGGCCTGCCGCCCGCCACCGCGTCCTCGTCGGAGGAGGAGGCCGGGGCTGGGGAGCCCGAG
GATGCCATCGGGTTCGGCGGACAGATCTGGGGcttcgaggaggagattgttgctggggatgtcg
ccggggacgttgcccccacgacgcagcccgagctcgggttccttctcgaggcctccgacgacga
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence CTTCGAGGAGGAGATTGTTGCTGGGGATGTCGCCGGGGACGTTGCCCCCACGACGCAGCCCGAG
CTCGGGTTCCTTCTCGAGGCCTCCGACGACGAGCTCGGCCTGCCGCCCGCCACCGCGTCCTCGT
CGGAGGAGGAGGCCGGGGCTGGGGAGCCCGAGGATGCCATCGGGTTCGGCGGACAGATCTGGGG
Conservation Information
Conserved circRNAs NA
PMCS
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Huang et al., 2021