Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | AT1G12470_circ_g.6 |
ID in PlantcircBase | ath_circ_002264 |
Alias | Ath_circ_FC0326 |
Organism | Arabidpsis thaliana |
Position | chr1: 4254718-4255381 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | CIRCexplorer, PcircRNA_finder |
Parent gene | AT1G12470 |
Parent gene annotation |
Zinc ion binding protein |
Parent gene strand | + |
Alternative splicing | AT1G12470_circ_g.2 AT1G12470_circ_g.3 AT1G12470_circ_g.4 AT1G12470_circ_g.5 AT1G12470_circ_g.7 AT1G12470_circ_g.8 |
Support reads | 1 |
Tissues | aerial, whole_plant |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | AT1G12470.1:4 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.195023193 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Chu et al., 2017;Chen et al., 2017a |