Plant Circular RNA Database

Detail information of GLYMA_20G218400_circ_g.1

			
						 General Information
					
						CircRNA Name
						GLYMA_20G218400_circ_g.1
					
						ID in PlantcircBase
						gma_circ_007810
					
						Alias
						gma-circRNA2807
					
						Organism
						
							Glycine max						
					
						Position
						
							chr20: 45406527-45409061  JBrowse»						
					
						Reference genome
						
							v2.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							GLYMA_20G218400						
					
						Parent gene annotation
						
							hypothetical protein
							
						Parent gene strand
						-
					
						Alternative splicing
						
							NA						
					
						Support reads
						NA
					
						Tissues
						flower bud
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						KRG92553:5
KRG92551:5
KRG92552:5
KRG92550:5
KRG92554:5

General Information
CircRNA Name	GLYMA_20G218400_circ_g.1
ID in PlantcircBase	gma_circ_007810
Alias	gma-circRNA2807
Organism	Glycine max
Position	chr20: 45406527-45409061 JBrowse»
Reference genome	v2.0.38
Type	e-circRNA
Identification method	find_circ
Parent gene	GLYMA_20G218400
Parent gene annotation	hypothetical protein
Parent gene strand	-
Alternative splicing	NA
Support reads	NA
Tissues	flower bud
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	KRG92553:5 KRG92551:5 KRG92552:5 KRG92550:5 KRG92554:5

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TGTCATAGGAATTGAATGAGACCTCTTCAGTAGGGTAGAAAACAGGAGCATCCTCAATATTTGG
CTTACGAGCATCTTCTGGTCGCCACCTGGCAACAACcttgagtgcttttgccaaaaggccatcc
tttccacagacatccttccatcgtagattatccaaagtattcttcttcagcaaatcaagctccc
attgggct

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1347
Transcript exons: 45406527-45406895,45407132-45407293,45408016-45408240,45
408350-45408862,45408984-45409061
CTTGAGTGCTTTTGCCAAAAGGCCATCCTTTCCACAGACATCCTTCCATCGTAGATTATCCAAA
GTATTCTTCTTCAGCAAATCAAGCTCCCATTGGGCTTGTACTGCTTCCCTTGCAGCCCCAAGCA
ACAGCTTATCATGTGATATAGAAGTCTTGCGCCCCTGCTCCTGGTACAGCTCTATAGCAATATG
CCCATGGGGCAGCCAGTCAACAGGAGCTACATTAACAGCCTCAGCACAGTTGAAGCCGCAGTTG
AACCCAGAGTGGTAGGCTCTAGGAAATGTCAGAACAAAGTCCCCAGGGTTTTGGATACACCTAT
AAACTGGTACTCCTTTAGACTTAAGGATAGATGGAGAAAGCTGAGTGACCAGCTTATGAAGCAA
GTCAGGCTGTTCTTCAAAAAGCTCTGGTAAATGCTTTCGCATGGCCTCTTCCAATTTGCAGGCA
TCTTTTCCAGGGACACCATACCACATTTTTGGAGCTCCCCAATGCAAGTAATTCAATGAATATA
AATGATGATCTTCCACATGCCAACAAAAGGAGGAAAAGCACATTCCTACATACAACCATGGCAC
TAGAACACCAGATATATCACTGCTTTCATAAGAGAGCAGAGAGCCAGGTAGCCTTGCAAAGTTA
TTTAAATTCCAGCCAGATTTTATGTACTGTTCATGTGAAGCAGAACCTACTTGACTAGATTTGC
TAGGGAAACCACTCCCAAAAATCCCAGTTTCCAGATCAGCTCCATAAAGCACCTCAATTTCTTC
AGTAGGACTCTCGACCATCCGCCAATATTCACCTTCAATGTTCTCTACGGAAGGCTCTGAGGTA
CCATTTAAAATTGTTGTATTAGCACCCAAATGAGATACATTCTCATTTTTTCTGAAGTATTTGA
GCTGAAAATCTTCTGCATATCTCTGAAATGTTTCCAGGGTAAATTCTGGACCAGGTTCAAACCC
AAACCTTTCAACTTCACAAAATCCTGCATTAGGTCCTGTTCTAGTGCTATTATCCACCCCCATC
CTTGTGCATCTTCTCCTTTTCCTCTTCATATTAGTTTGAATCTTTGACATCTTTCTCATTGAAT
CACGATTCTGAAGTTTGTCAATCCTCTGAACACGGGTAGAAAATTTAGAACCCTCCCATATACT
TTTTTCCTTGAGAGGACAAGGGGGTTTCCAAGAAGATGGCGGAACAATGCGACAAATTCCATAT
GGCTCAGCCTTGGAGCGAATGCTTGATATATATTTCAAAGTATCTTGAAACTCCTCTTCAGTAG
GGTAGAAAACAGGAGCATCCTCAATATTTGGCTTACGAGCATCTTCTGGTCGCCACCTGGCAAC
AAC
						
					

						Genomic sequence
						
							CTTGAGTGCTTTTGCCAAAAGGCCATCCTTTCCACAGACATCCTTCCATCGTAGATTATCCAAA
GTATTCTTCTTCAGCAAATCAAGCTCCCATTGGGCTTGTACTGCTTCCCTTGCAGCCCCAAGCA
ACAGCTTATCATGTGATATAGAAGTCTTGCGCCCCTGCTCCTGGTACAGCTCTATAGCAATATG
CCCATGGGGCAGCCAGTCAACAGGAGCTACATTAACAGCCTCAGCACAGTTGAAGCCGCAGTTG
AACCCAGAGTGGTAGGCTCTAGGAAATGTCAGAACAAAGTCCCCAGGGTTTTGGATACACCTAT
AAACTGGTACTCCTTTAGACTTAAGGATAGATGGAGAAAGCTGAGTGACCTGCAACAAAAAGTT
CGAAATTCAGGCATTAGATAAATATATGTCCAAAGAAATACACATGATCATCCAACATAAGTAT
GGATAGGTGATTGAAATTAAGAGGTAAAAAATGGAAGATGGAACTTCACTCCACCCAGTGAGAA
CATAATAATAATTTTAATCTTTTTTGTTACCTCTCTAACAGAAAAAAGATGATTAAATGACATT
TGTCAAGTGATAGAAAAACTTTTACTCACCAGCTTATGAAGCAAGTCAGGCTGTTCTTCAAAAA
GCTCTGGTAAATGCTTTCGCATGGCCTCTTCCAATTTGCAGGCATCTTTTCCAGGGACACCATA
CCACATTTTTGGAGCTCCCCAATGCAAGTAATTCAATGAATATAAATGATGATCTTCCACATGC
TGCATCCATAATTAAACCACAAAGAAAATATAAAGCTGTTATCAAAACTAAAGATACTATGCCA
ACTAAGAGTTCATTCTCTCACACGTAAACACACACTTCACCAAAAGCACACACACACACAACAT
CAACAAATTGCCACTCAACACACAACAAATAGTTCTGGTCTTATGATTTACCAAACAAATCAGG
GCAAAAAGATGTCACCTATACTATGTATCCCCTTATTCTCACACAAATGAACACCCTTACATCC
CCTCCCATCCTCAAAGGGCATACAAAGACACAACACGCACATAGACATGCATGGGTTCCTATAA
ACAACAACAAATGGAAGACAAGCAAATATATACTAAAGATAAAGATACATATATACATATAAGT
ATGTAACTGTAACAGTTATTGTCAAGATATTACAGATTTATTGCAAGCTGTTATATCATATTTG
ATTCGTATTTACGTAGATAGCTTATTTTTAGAATATTTGCTTTACATTGTAATTAGGACAATAT
TTTTAGATTTAGGTCCATTCTTTACTTATCTTTGGGTTCTCCTTGTATCTATATATATTCAACT
ATTCATGTATCCTTCTGAACAGTTTAATCAATCAGAAATGAAGTATTTTTTCAATCTTTTCCTT
TGGTCTCAAGTGTTGTAAACACAAATTCTGAAGAATTCATGAAATACATTCTAGAAAATGAGGG
AAATATGTAGTCCTTACCCAACAAAAGGAGGAAAAGCACATTCCTACATACAACCATGGCACTA
GAACACCAGATATATCACTGCTTTCATAAGAGAGCAGAGAGCCAGGTAGCCTTGCAAAGTTATT
TAAATTCCAGCCAGATTTTATGTACTGTTCATGTGAAGCAGAACCTACTTGACTAGATTTGCTA
GGGAAACCACTCCCAAAAATCCCAGTTTCCAGATCAGCTCCATAAAGCACCTGGAAGAGTATAG
AAAATGAAATGTAAAGAGAGCAGCATATACTAAGGGCAACAAATAGGCAATAATTTCATGAAGC
AGCAAACTATTGAGATTCTATGGAAAGTGACCTCAATTTCTTCAGTAGGACTCTCGACCATCCG
CCAATATTCACCTTCAATGTTCTCTACGGAAGGCTCTGAGGTACCATTTAAAATTGTTGTATTA
GCACCCAAATGAGATACATTCTCATTTTTTCTGAAGTATTTGAGCTGAAAATCTTCTGCATATC
TCTGAAATGTTTCCAGGGTAAATTCTGGACCAGGTTCAAACCCAAACCTTTCAACTTCACAAAA
TCCTGCATTAGGTCCTGTTCTAGTGCTATTATCCACCCCCATCCTTGTGCATCTTCTCCTTTTC
CTCTTCATATTAGTTTGAATCTTTGACATCTTTCTCATTGAATCACGATTCTGAAGTTTGTCAA
TCCTCTGAACACGGGTAGAAAATTTAGAACCCTCCCATATACTTTTTTCCTTGAGAGGACAAGG
GGGTTTCCAAGAAGATGGCGGAACAATGCGACAAATTCCATATGGCTCAGCCTTGGAGCGAATG
CTTGATATATATTTCAAAGTATCTTGAAACTCCTGGGAAAAAAAATGACAAGTCAAGAGATATG
ATTTTCTGATAAAGCTAATTGACAGAACTAAACAGAACAGTGACATGGACAGAAGTGAATTCAA
ATGTGTCATAGGAATTGAATGAGACCTCTTCAGTAGGGTAGAAAACAGGAGCATCCTCAATATT
TGGCTTACGAGCATCTTCTGGTCGCCACCTGGCAACAAC
						
					

			
		

Sequences
Splice junction sequence	TGTCATAGGAATTGAATGAGACCTCTTCAGTAGGGTAGAAAACAGGAGCATCCTCAATATTTGG CTTACGAGCATCTTCTGGTCGCCACCTGGCAACAACcttgagtgcttttgccaaaaggccatcc tttccacagacatccttccatcgtagattatccaaagtattcttcttcagcaaatcaagctccc attgggct
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1347 Transcript exons: 45406527-45406895,45407132-45407293,45408016-45408240,45 408350-45408862,45408984-45409061 CTTGAGTGCTTTTGCCAAAAGGCCATCCTTTCCACAGACATCCTTCCATCGTAGATTATCCAAA GTATTCTTCTTCAGCAAATCAAGCTCCCATTGGGCTTGTACTGCTTCCCTTGCAGCCCCAAGCA ACAGCTTATCATGTGATATAGAAGTCTTGCGCCCCTGCTCCTGGTACAGCTCTATAGCAATATG CCCATGGGGCAGCCAGTCAACAGGAGCTACATTAACAGCCTCAGCACAGTTGAAGCCGCAGTTG AACCCAGAGTGGTAGGCTCTAGGAAATGTCAGAACAAAGTCCCCAGGGTTTTGGATACACCTAT AAACTGGTACTCCTTTAGACTTAAGGATAGATGGAGAAAGCTGAGTGACCAGCTTATGAAGCAA GTCAGGCTGTTCTTCAAAAAGCTCTGGTAAATGCTTTCGCATGGCCTCTTCCAATTTGCAGGCA TCTTTTCCAGGGACACCATACCACATTTTTGGAGCTCCCCAATGCAAGTAATTCAATGAATATA AATGATGATCTTCCACATGCCAACAAAAGGAGGAAAAGCACATTCCTACATACAACCATGGCAC TAGAACACCAGATATATCACTGCTTTCATAAGAGAGCAGAGAGCCAGGTAGCCTTGCAAAGTTA TTTAAATTCCAGCCAGATTTTATGTACTGTTCATGTGAAGCAGAACCTACTTGACTAGATTTGC TAGGGAAACCACTCCCAAAAATCCCAGTTTCCAGATCAGCTCCATAAAGCACCTCAATTTCTTC AGTAGGACTCTCGACCATCCGCCAATATTCACCTTCAATGTTCTCTACGGAAGGCTCTGAGGTA CCATTTAAAATTGTTGTATTAGCACCCAAATGAGATACATTCTCATTTTTTCTGAAGTATTTGA GCTGAAAATCTTCTGCATATCTCTGAAATGTTTCCAGGGTAAATTCTGGACCAGGTTCAAACCC AAACCTTTCAACTTCACAAAATCCTGCATTAGGTCCTGTTCTAGTGCTATTATCCACCCCCATC CTTGTGCATCTTCTCCTTTTCCTCTTCATATTAGTTTGAATCTTTGACATCTTTCTCATTGAAT CACGATTCTGAAGTTTGTCAATCCTCTGAACACGGGTAGAAAATTTAGAACCCTCCCATATACT TTTTTCCTTGAGAGGACAAGGGGGTTTCCAAGAAGATGGCGGAACAATGCGACAAATTCCATAT GGCTCAGCCTTGGAGCGAATGCTTGATATATATTTCAAAGTATCTTGAAACTCCTCTTCAGTAG GGTAGAAAACAGGAGCATCCTCAATATTTGGCTTACGAGCATCTTCTGGTCGCCACCTGGCAAC AAC
Genomic sequence	CTTGAGTGCTTTTGCCAAAAGGCCATCCTTTCCACAGACATCCTTCCATCGTAGATTATCCAAA GTATTCTTCTTCAGCAAATCAAGCTCCCATTGGGCTTGTACTGCTTCCCTTGCAGCCCCAAGCA ACAGCTTATCATGTGATATAGAAGTCTTGCGCCCCTGCTCCTGGTACAGCTCTATAGCAATATG CCCATGGGGCAGCCAGTCAACAGGAGCTACATTAACAGCCTCAGCACAGTTGAAGCCGCAGTTG AACCCAGAGTGGTAGGCTCTAGGAAATGTCAGAACAAAGTCCCCAGGGTTTTGGATACACCTAT AAACTGGTACTCCTTTAGACTTAAGGATAGATGGAGAAAGCTGAGTGACCTGCAACAAAAAGTT CGAAATTCAGGCATTAGATAAATATATGTCCAAAGAAATACACATGATCATCCAACATAAGTAT GGATAGGTGATTGAAATTAAGAGGTAAAAAATGGAAGATGGAACTTCACTCCACCCAGTGAGAA CATAATAATAATTTTAATCTTTTTTGTTACCTCTCTAACAGAAAAAAGATGATTAAATGACATT TGTCAAGTGATAGAAAAACTTTTACTCACCAGCTTATGAAGCAAGTCAGGCTGTTCTTCAAAAA GCTCTGGTAAATGCTTTCGCATGGCCTCTTCCAATTTGCAGGCATCTTTTCCAGGGACACCATA CCACATTTTTGGAGCTCCCCAATGCAAGTAATTCAATGAATATAAATGATGATCTTCCACATGC TGCATCCATAATTAAACCACAAAGAAAATATAAAGCTGTTATCAAAACTAAAGATACTATGCCA ACTAAGAGTTCATTCTCTCACACGTAAACACACACTTCACCAAAAGCACACACACACACAACAT CAACAAATTGCCACTCAACACACAACAAATAGTTCTGGTCTTATGATTTACCAAACAAATCAGG GCAAAAAGATGTCACCTATACTATGTATCCCCTTATTCTCACACAAATGAACACCCTTACATCC CCTCCCATCCTCAAAGGGCATACAAAGACACAACACGCACATAGACATGCATGGGTTCCTATAA ACAACAACAAATGGAAGACAAGCAAATATATACTAAAGATAAAGATACATATATACATATAAGT ATGTAACTGTAACAGTTATTGTCAAGATATTACAGATTTATTGCAAGCTGTTATATCATATTTG ATTCGTATTTACGTAGATAGCTTATTTTTAGAATATTTGCTTTACATTGTAATTAGGACAATAT TTTTAGATTTAGGTCCATTCTTTACTTATCTTTGGGTTCTCCTTGTATCTATATATATTCAACT ATTCATGTATCCTTCTGAACAGTTTAATCAATCAGAAATGAAGTATTTTTTCAATCTTTTCCTT TGGTCTCAAGTGTTGTAAACACAAATTCTGAAGAATTCATGAAATACATTCTAGAAAATGAGGG AAATATGTAGTCCTTACCCAACAAAAGGAGGAAAAGCACATTCCTACATACAACCATGGCACTA GAACACCAGATATATCACTGCTTTCATAAGAGAGCAGAGAGCCAGGTAGCCTTGCAAAGTTATT TAAATTCCAGCCAGATTTTATGTACTGTTCATGTGAAGCAGAACCTACTTGACTAGATTTGCTA GGGAAACCACTCCCAAAAATCCCAGTTTCCAGATCAGCTCCATAAAGCACCTGGAAGAGTATAG AAAATGAAATGTAAAGAGAGCAGCATATACTAAGGGCAACAAATAGGCAATAATTTCATGAAGC AGCAAACTATTGAGATTCTATGGAAAGTGACCTCAATTTCTTCAGTAGGACTCTCGACCATCCG CCAATATTCACCTTCAATGTTCTCTACGGAAGGCTCTGAGGTACCATTTAAAATTGTTGTATTA GCACCCAAATGAGATACATTCTCATTTTTTCTGAAGTATTTGAGCTGAAAATCTTCTGCATATC TCTGAAATGTTTCCAGGGTAAATTCTGGACCAGGTTCAAACCCAAACCTTTCAACTTCACAAAA TCCTGCATTAGGTCCTGTTCTAGTGCTATTATCCACCCCCATCCTTGTGCATCTTCTCCTTTTC CTCTTCATATTAGTTTGAATCTTTGACATCTTTCTCATTGAATCACGATTCTGAAGTTTGTCAA TCCTCTGAACACGGGTAGAAAATTTAGAACCCTCCCATATACTTTTTTCCTTGAGAGGACAAGG GGGTTTCCAAGAAGATGGCGGAACAATGCGACAAATTCCATATGGCTCAGCCTTGGAGCGAATG CTTGATATATATTTCAAAGTATCTTGAAACTCCTGGGAAAAAAAATGACAAGTCAAGAGATATG ATTTTCTGATAAAGCTAATTGACAGAACTAAACAGAACAGTGACATGGACAGAAGTGAATTCAA ATGTGTCATAGGAATTGAATGAGACCTCTTCAGTAGGGTAGAAAACAGGAGCATCCTCAATATT TGGCTTACGAGCATCTTCTGGTCGCCACCTGGCAACAAC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.35735906

Conservation Information
Conserved circRNAs	NA
PMCS	0.35735906

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							45408678-45406529(-)
45406569-45408846(-)
45406577-45409029(-)
						
					

						Potential amino acid sequence
						
							MRKMSKIQTNMKRKRRRCTRMGVDNSTRTGPNAGFCEVERFGFEPGPEFTLETFQRYAEDFQLK
YFRKNENVSHLGANTTILNGTSEPSVENIEGEYWRMVESPTEEIEVLYGADLETGIFGSGFPSK
SSQVGSASHEQYIKSGWNLNNFARLPGSLLSYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLY
SLNYLHWGAPKMWYGVPGKDACKLEEAMRKHLPELFEEQPDLLHKLVTQLSPSILKSKGVPVYR
CIQNPGDFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGHIAIELYQEQGRKTSISHDKLLL
GAAREAVQAQWELDLLKKNTLDNLRWKDVCGKDGLLAKALKVVARWRPEDARKPNIEDAPVFYP
TEEEFQDTLKYISSIRSKAEPYGICRIVPPSSWKPPCPLKEKSIWEGSKFSTRVQRIDKLQNRD
SMRKMSKIQTNMKRKRRRCTRMGVDNSTRTGPNAGFCEVERFGFEPGPEFTLETFQRYAEDFQL
KYFRKNENVSHLGANTTILNGTSEPSVENIEGEYWRMVESPTEEIEVLYGADLETGIFGSGFPS
KSSQVGSASHEQYIKSGWNLNNFARLPGSLLSYESSDISGVLVPWLYVGMCFSSFCWHVEDHHL
YSLNYLHWGAPKMWYGVPGKDACKLEEAMRKHLPELFEEQPDLLHKLVTQLSPSILKSKGVPVY
RCIQNPGDFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGHIAIELYQEQGRKTSISHDKLL
LGAAREAVQAQWELDLLKKNTLDNLRWKDVCGKDGLLAKALKVVARWRPEDARKPNIEDAPVFY
PTEEEFQDTLKYISSIRSKAEPYGICRIVPPSSWKPPCPLKEKSIWEGSKFSTRVQRIDKLQNR
DSMRKMSKIQTNMKRKRRRCTRMGVDNSTRTGPNAGFCEVERFGFEPGPEFTLETFQRYAEDFQ
LKYFRKNENVSHLGANTTILNGTSEPSVENIEGEYWRMVESPTEEIEVLYGADLETGIFGSGFP
SKSSQVGSASHEQYIKSGWNLNNFARLPGSLLSYESSDISGVLVPWLYVGMCFSSFCWHVEDHH
LYSLNYLHWGAPKMWYGVPGKDACKLEEAMRKHLPELFEEQPDLLHKLVTQLSPSILKSKGVPV
YRCIQNPGDFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGHIAIELYQEQGRKTSISHDKL
LLGAAREAVQAQWELDLLKKNTLDNLRWKDVCGKDGLLAKALKVVARWRPEDARKPNIEDAPVF
YPTEEEFQDTLKYISSIRSKAEPYGICRIVPPSSWKPPCPLKEKSIWEGSKFSTRVQRIDKLQN
RDSMRKMSKIQTNMKRKRRRCTRMGVDNSTRTGPNAGFCEVERFGFEPGPEFTLETFQRYAEDF
QLKYFRKNENVSHLGANTTILNGTSEPSVENIEGEYWRMVESPTEEIEVLYGADLETGIFGSGF
PSKSSQVGSASHEQYIKSGWNLNNFARLPGSLLSYESSDISGVLVPWLYVGMCFSSFCWHVEDH
HLYSLNYLHWGAPKMWYGVPGKDACKLEEAMRKHLPELFEEQPDLLHKLVTQLSPSILKSKGVP
VYRCIQNPGDFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGHIAIELYQEQGRKTSISHDK
LLLGAAREAVQAQWELDLLKKNTLDNLRWKDVCGKDGLLAKALK(-)
MSVERMAFWQKHSRLLPGGDQKMLVSQILRMLLFSTLLKRSFKIL*(-)
MEGCLWKGWPFGKSTQGCCQVATRRCS*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	45408678-45406529(-) 45406569-45408846(-) 45406577-45409029(-)
Potential amino acid sequence	MRKMSKIQTNMKRKRRRCTRMGVDNSTRTGPNAGFCEVERFGFEPGPEFTLETFQRYAEDFQLK YFRKNENVSHLGANTTILNGTSEPSVENIEGEYWRMVESPTEEIEVLYGADLETGIFGSGFPSK SSQVGSASHEQYIKSGWNLNNFARLPGSLLSYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLY SLNYLHWGAPKMWYGVPGKDACKLEEAMRKHLPELFEEQPDLLHKLVTQLSPSILKSKGVPVYR CIQNPGDFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGHIAIELYQEQGRKTSISHDKLLL GAAREAVQAQWELDLLKKNTLDNLRWKDVCGKDGLLAKALKVVARWRPEDARKPNIEDAPVFYP TEEEFQDTLKYISSIRSKAEPYGICRIVPPSSWKPPCPLKEKSIWEGSKFSTRVQRIDKLQNRD SMRKMSKIQTNMKRKRRRCTRMGVDNSTRTGPNAGFCEVERFGFEPGPEFTLETFQRYAEDFQL KYFRKNENVSHLGANTTILNGTSEPSVENIEGEYWRMVESPTEEIEVLYGADLETGIFGSGFPS KSSQVGSASHEQYIKSGWNLNNFARLPGSLLSYESSDISGVLVPWLYVGMCFSSFCWHVEDHHL YSLNYLHWGAPKMWYGVPGKDACKLEEAMRKHLPELFEEQPDLLHKLVTQLSPSILKSKGVPVY RCIQNPGDFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGHIAIELYQEQGRKTSISHDKLL LGAAREAVQAQWELDLLKKNTLDNLRWKDVCGKDGLLAKALKVVARWRPEDARKPNIEDAPVFY PTEEEFQDTLKYISSIRSKAEPYGICRIVPPSSWKPPCPLKEKSIWEGSKFSTRVQRIDKLQNR DSMRKMSKIQTNMKRKRRRCTRMGVDNSTRTGPNAGFCEVERFGFEPGPEFTLETFQRYAEDFQ LKYFRKNENVSHLGANTTILNGTSEPSVENIEGEYWRMVESPTEEIEVLYGADLETGIFGSGFP SKSSQVGSASHEQYIKSGWNLNNFARLPGSLLSYESSDISGVLVPWLYVGMCFSSFCWHVEDHH LYSLNYLHWGAPKMWYGVPGKDACKLEEAMRKHLPELFEEQPDLLHKLVTQLSPSILKSKGVPV YRCIQNPGDFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGHIAIELYQEQGRKTSISHDKL LLGAAREAVQAQWELDLLKKNTLDNLRWKDVCGKDGLLAKALKVVARWRPEDARKPNIEDAPVF YPTEEEFQDTLKYISSIRSKAEPYGICRIVPPSSWKPPCPLKEKSIWEGSKFSTRVQRIDKLQN RDSMRKMSKIQTNMKRKRRRCTRMGVDNSTRTGPNAGFCEVERFGFEPGPEFTLETFQRYAEDF QLKYFRKNENVSHLGANTTILNGTSEPSVENIEGEYWRMVESPTEEIEVLYGADLETGIFGSGF PSKSSQVGSASHEQYIKSGWNLNNFARLPGSLLSYESSDISGVLVPWLYVGMCFSSFCWHVEDH HLYSLNYLHWGAPKMWYGVPGKDACKLEEAMRKHLPELFEEQPDLLHKLVTQLSPSILKSKGVP VYRCIQNPGDFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGHIAIELYQEQGRKTSISHDK LLLGAAREAVQAQWELDLLKKNTLDNLRWKDVCGKDGLLAKALK(-) MSVERMAFWQKHSRLLPGGDQKMLVSQILRMLLFSTLLKRSFKIL(-) MEGCLWKGWPFGKSTQGCCQVATRRCS(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chen et al., 2018

circRNA

Detail information of GLYMA_20G218400_circ_g.1

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