Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | AT1G13170_circ_g.5 |
ID in PlantcircBase | ath_circ_002360 |
Alias | At_ciR5646 |
Organism | Arabidpsis thaliana |
Position | chr1: 4490330-4490790 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | PcircRNA_finder, find_circ |
Parent gene | AT1G13170 |
Parent gene annotation |
OSBP(Oxysterol binding protein)-related protein 1D |
Parent gene strand | - |
Alternative splicing | AT1G13170_circ_g.4 |
Support reads | 2/19 |
Tissues | leaf/whole_plant |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT1G13170.2:1 AT1G13170.1:1 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.414831319 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Ye et al., 2015;Chu et al., 2017 |