Plant Circular RNA Database

Detail information of Csa1G629160_circ_g.1

			
						 General Information
					
						CircRNA Name
						Csa1G629160_circ_g.1
					
						ID in PlantcircBase
						csa_circ_000626
					
						Alias
						Chr1:24948560_24953547
					
						Organism
						
							Cucumis sativus						
					
						Position
						
							chrChr1: 24948560-24953547  JBrowse»						
					
						Reference genome
						
							Cucumis sativus v1.5						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRI2
					
						Parent gene
						
							Csa1G629160						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						+
					
						Alternative splicing
						
							Chr1_circ_ig.132 Csa1G629160_circ_g.2 Chr1_circ_ig.133 Csa1G629170_circ_g.1 Csa1G629170_circ_g.2 						
					
						Support reads
						NA
					
						Tissues
						leaf,root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Csa1G629160.1:4

General Information
CircRNA Name	Csa1G629160_circ_g.1
ID in PlantcircBase	csa_circ_000626
Alias	Chr1:24948560_24953547
Organism	Cucumis sativus
Position	chrChr1: 24948560-24953547 JBrowse»
Reference genome	Cucumis sativus v1.5
Type	e-circRNA
Identification method	CIRI2
Parent gene	Csa1G629160
Parent gene annotation	NA
Parent gene strand	+
Alternative splicing	Chr1_circ_ig.132 Csa1G629160_circ_g.2 Chr1_circ_ig.133 Csa1G629170_circ_g.1 Csa1G629170_circ_g.2
Support reads	NA
Tissues	leaf,root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Csa1G629160.1:4

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TTATCATTGGACTATAAGTTAATTTATTGCTGTAGGAATCTTTCCTGGAAAATGCTATCCAATT
CCAGCTAGAGAAATTACCAAAGAAGAACTTGAGATGtcatgtggcgaacataaagaatctgcaa
ttctcaagcatgggttttttgctccttcatttgtacaagattcaaattttttaaagactgagct
tgaaatga

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							TCATGTGGCGAACATAAAGAATCTGCAATTCTCAAGCATGGGTTTTTTGCTCCTTCATTTGTAC
AAGATTCAAATTTTTTAAAGACTGAGCTTGAAATGAAAAGAACTGATAAAGGTGAGTCACTTGT
TGCAAATACACGTGTTGTGTATTTTAATTTTAATCCATTAAAGCTTCTTCTTGTCTTTGTATTC
TTCATTCTTGTACTTTTAGTCTTATTTGCTTGGTAAATGGGTGGCCCTATTTCATGTCATATTG
TATTATTTATTATTATTTTTTAATTTAAGACAGCTGACCATTGGTTTCCTTGAAATATTCCTAG
ATATGTTATTGTTAAGTATGTATAGTGAACTTATACTATTTTGAATTTAATTGGATGTTAATAT
TTGACCATGTATGCTGTTTCTTTTCTCCTCTCCTTGTTTGATACATGCCCATTTTTTTTAATTA
GCTTTTCTATAAATTCTTGTACGTAGTTACTAGTTCTTTTTTGAATATTTCTCTCCCCTCTTGC
TAAACACTAACTCTAAACTCCAGCCTCTGATGCAGCCATCACCATCTGCTGCCATAGTCTTCGT
TGTCAACGGTCATTGCCATCACTGTGAACCTTTGTGGGTTCTTCGTTCTGTCTTTTGTGTCTCT
AGCATTGGCTTTTCGATGTCTTTGAATTAAAAATATCCTGTCTTTCCGTTGCCATCTGCCATTG
TTTCTATCATCATATTCTGTCACCATTGTCATTATCATTGTCCTTGTTGTCGTTTCACTGTCGT
TGTGGGTTTTCAACGCTTTTTGGGTTTTCTTTTCTCCTAGCCGTCTACTCCTATTATTGGCAGT
TGTTCTCCTTTGCCATCCTCCATCGTGCCAGATTCTTTTCTTCCTTTAGTTTAACTTGTTGGTT
GAGAAGGGAAACATTGTCATGCCAAGCACGGTGGTAGCAGAATTAGAGAGAATCATGTGCAATT
TTTTCTGGGAAGGGCAAAAAGGCAGCAAAATAATTCACTTGGTAAATTGGAAACCTTGCTCACA
AACTATGGAGACTGGGTGTCTTGGTGTGGGAAACCTGAAAAACAGAAACTTGGCTCTTCTATTT
AAATGGAATTGGAGATTTTTAAAGGATCCAAATGCATTTTGGTGCAAAATAGCGAGAAGCATCC
ATGGATCTAACTCCTCCCAATGGCACTCTTCTGGAAAATCTGGTCTAAGTCTTCGCAGCCCCGG
GATTAGTATATAAAAAATTTGGTGTTCATTGAACCATCATGTATCTTTCAAGCTAGGTGATGGC
CAAAAATCACATTCTGGAAGGATCCTTGGTGCTTAGCAGTTAGCCCAATCCTTCAGTCATGCTT
TCCCCAATCTCTTCCGAATTGCAGCCAATCCCGTGGCCAAGGTTATTGCAAATTGGGACTCTTC
AACATCTTTATGGAGCCCCTCTTTTCGCTGAGCACTAAAAGATGAGGAAATTGAAGAATTTCAG
CTTCTAATCGGTGGTCTACAAGGTAAAGCCATTTCCTTAGCCTTAGATTCAAGAGCGTGGTCCT
TGGATTCTTCAGAAACTTTCTTGGTAAAATCTTTTAAGTTCTTAACTGCCTCTTCACAGATTGA
TAAATGAATTCAGCAAGCTCTATGAAAATCTAAGAGCCCAAAGAGACTAAACATTCTGGTCTGG
TTTACGTTGTTTGGAATCTTAAACTGTGCGGCAACTCTTCAACAAAAACTCCAAGCTCATTCCC
CTTCAGTTTGTCCACTTTGTCATGCTGCAGGAGAGGATCTTCAACATCTTTTCTTCGTTTACTC
TTACTCTCGTGAATGTTGGTGAAAGCTATTCTCACTTTTTCAGATTTCGTGGGTGTTTGGCTTT
TGCTTTAAAGACAATATACTTTCAGTGTTCAGTGACCCATCCCTTCCTAAAAAATCGAATATCT
TATGGTCTAATGCAGTCAAAGCACTGCTATTGGAACTTTGTTTTGAAAGAAATCAGAGAGTTTT
CCATGATAACATACCTTGCATGGTCTGACTTGTTTGCCTCAGCATGACTCCTAGCTTCCTCTTG
GTTATCTCTCTCGGCTTTTCACAGATTATTCAATTCAAGAAATTTGCCTAAACTCGAATGCTTT
CCTTTTTACATTATAATGTATTTCCATTGACCTTTGTTGAGCTTTCCACTTCAATGTATTTTCT
CCGTACTGTTTCTTATGTTCCTTGGATGTTTCTTCTGTTGTAACAAGGCTGTACATAAGTTATC
CTATTTGTATCCATTTTACTATCAGGAAGTCTTTGTTTCCTTTTCACAAAAGAAAAAAAGAAAA
AGAAAAAGAGAAATGGAAACAATTTAATTGATAAATGAAATAAAGGAGGAAGAACTCCAAGTCA
CCCAACGATTACATAAAATTTTGTCAGTGGAAAAATAAACAAGAAAGACTATAAAAAAAGGGCC
TATAAAGTTTACACTAATACAAATCATATGAATTTTAAATTAGTCGATTGACCCGTAAGTTTAA
GCTTACGAGTGAAGGTAAATTTAATATTATATCATTTAACACTTTTCCTCGGCTTGAAATCTAA
TGTTAATTGGAGGGGAAATAGCATTGCAGAGGTTTGAGTGTAGGACATCTTGAACCACTTGCTC
TGGTACCATCTAAATCACCAATTAATCCAAAAGCTCAATCTTATGGGTGAAGGTAAATTTAATA
TCATATCATTCAATTAAACAAGACAAATGCAAATCCACACCACTGTCGTTGGAGGAAAATGAAT
CTCGGAAGTGTTGCCCTTTAGAATACAAGGGGCCTAACATCGGCAGAAAACAAGCGTACAAAAC
AATTTTGCCAAGGGAAAAGAGGTCCTCTTTAATATCTGTAAAATGATGGAGGAACTTATCTTGG
ACCTTCTCTTTTAGGTTTGTTTGCCACTTGAATTAGAGAGCTCTCTTGGGTATAACGGGTCTCG
GAAGGGTTTGGAATTTTACTAATTTTTAGCATCCCTTATCCCCTTTTTCTGGACTCCAATAGTT
GAATCTCCTGCTTAAATGTAATGTGTGTGTGTGTGTTTTGATATAAATATATTTGGGTGGTTTC
GGTTGATTCAGAGTGATTCCTGTTCTTACGTCTTCTTTATAATTTCATTTGTCATTATTTATAG
CTTTAAGTGTCTAACTGCAATTATTCTTATGTTGTATTTGTAGCCATGGTTTCACAAGTATCAA
CATCTAATAGTTCCACGGCAATAGGCTTTGATGAGAGAATGTTGCTGCATTCAGAAGTATGGGA
CTTCGTTCAGAACTTTTTATTTTGTAGATTCTCAAGCATTCAATTTCTTTTTGTCATTTCTTTT
GTGTCTTCGGCTCTGATTGTTGGATGCAAATGCATGTATTTTCCTGTGGAAATCTTCATACTTT
CAAAGTTTACAGCTATTCTACTCTTTTTTTGATGTAATTTCTTTTTTTGACGTCTAGTTTAATT
TACATGTTTGTACTGTGTCTATGTCACATCATACTATAATACTATTGTTCGTGCCTGATTCTGA
AAGATTAAACCCGAAATGTGGTGGAAAAATTTCAGATGCAAGTCTTTTTTCAGTTATTTATTTA
ATTGATTCGAATTTAATTTAAAAATTGGATCACAGTTCAAAATTCATGTGCAATATGGGGACTG
TCTTGTAAGCAGAAGCTCCAATATCAGGAGTCTCTAATTGCAAAAATATGTTTTACTCCCTCTA
TGCCGCTCCTATCTGGTGTTTCCTTGACAATAATGTTACAGGGGACCAAAACCTTCCTCTCTTT
CATTGTGTCTATGCTAGTTGCAACTAAATGCTGAAGCTTCCTATCCAACTTTTTGGTTTATCCT
CCTTCGATAGTACAAGATGGCCATGGCTTTGATTCAGCTGCTATGTGCCGATTTTTTCTAGCAA
AGCTCAATTTCTTTGGACAAATGCGGACATGAACCATCCTTTGGAAGTGCTTTGGTATTTAGTT
AAATGTTTTGCTTTCTCCTGCCTAATATTTTTGTTTTTATGACAAGGTTTATGCCAACCGAGAG
CTGTTTCTAAATTCTGTTGGCCCTGAGGGCAATTCATTTGTGACATATCTATCAATAGTTCCTG
CAAATAACATAAAAATCTACACACATGCAACATAGATAGAATATCAACCGAAACAGGAGAAAGG
AGAAAAGAAAACGATACTTTAGTCTGGAGAATTGGTTCTCTCCAGAGCCAAACAACCAAAATTC
ACACCCTCCCCTGCATATGAAAAACCTACATAAACCTTCAGTCATCAATTTCTGTACCAAAGCA
CTACCTTCTGATAAACAACAAACTTACTCTTGCTCAATTACTTTCTTACCCTTCATGGAGTATG
TACTCACAATTGGAGGTGATACATCCTTATCATTCCTTCTTCCAATCCTCACTTTTTCAATGGA
AATGTAGTTTCTTTGAAAGAAACAAAAAGAAAAAGAAAAAGAAAAATATAACATGCCTACATTA
ATATGTTTTTAAGTTTTCTTTTTCTTTTTAAATCTAAATTTAATTAATTTATATTATTCATTTT
TATGAATTTATGAAATGGCATGACACTGATCTTATTTTGTAATATTATTGTCATATGTCTTAGT
CTGTGGTTTAGTTTCAAAAGGATTTTTGCTTTGTTGTAAACTTTTTAATCTCTAGTTTTCTAGT
GCTTTACTTCCTGTCTTGTGGTATTCTTGCTAGAGAAGGTTGAAATGAAGTCACACCCACACCC
AGAAAGACCGGATCGTCTGAGAGCTATTGCTGCTAGCTTGGCTACAGCTGGTAATCATTATTTC
ATATTTTCTTTTGTTTTTAAGGTAGGAAATAGTTGGGCTGGTGTTTACAATTTAATATGTTGTA
ATGTAGTTTATTGCTTTCAACATTTTATCATTGGACTATAAGTTAATTTATTGCTGTAGGAATC
TTTCCTGGAAAATGCTATCCAATTCCAGCTAGAGAAATTACCAAAGAAGAACTTGAGATG
						
					

			
		

Sequences
Splice junction sequence	TTATCATTGGACTATAAGTTAATTTATTGCTGTAGGAATCTTTCCTGGAAAATGCTATCCAATT CCAGCTAGAGAAATTACCAAAGAAGAACTTGAGATGtcatgtggcgaacataaagaatctgcaa ttctcaagcatgggttttttgctccttcatttgtacaagattcaaattttttaaagactgagct tgaaatga
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	TCATGTGGCGAACATAAAGAATCTGCAATTCTCAAGCATGGGTTTTTTGCTCCTTCATTTGTAC AAGATTCAAATTTTTTAAAGACTGAGCTTGAAATGAAAAGAACTGATAAAGGTGAGTCACTTGT TGCAAATACACGTGTTGTGTATTTTAATTTTAATCCATTAAAGCTTCTTCTTGTCTTTGTATTC TTCATTCTTGTACTTTTAGTCTTATTTGCTTGGTAAATGGGTGGCCCTATTTCATGTCATATTG TATTATTTATTATTATTTTTTAATTTAAGACAGCTGACCATTGGTTTCCTTGAAATATTCCTAG ATATGTTATTGTTAAGTATGTATAGTGAACTTATACTATTTTGAATTTAATTGGATGTTAATAT TTGACCATGTATGCTGTTTCTTTTCTCCTCTCCTTGTTTGATACATGCCCATTTTTTTTAATTA GCTTTTCTATAAATTCTTGTACGTAGTTACTAGTTCTTTTTTGAATATTTCTCTCCCCTCTTGC TAAACACTAACTCTAAACTCCAGCCTCTGATGCAGCCATCACCATCTGCTGCCATAGTCTTCGT TGTCAACGGTCATTGCCATCACTGTGAACCTTTGTGGGTTCTTCGTTCTGTCTTTTGTGTCTCT AGCATTGGCTTTTCGATGTCTTTGAATTAAAAATATCCTGTCTTTCCGTTGCCATCTGCCATTG TTTCTATCATCATATTCTGTCACCATTGTCATTATCATTGTCCTTGTTGTCGTTTCACTGTCGT TGTGGGTTTTCAACGCTTTTTGGGTTTTCTTTTCTCCTAGCCGTCTACTCCTATTATTGGCAGT TGTTCTCCTTTGCCATCCTCCATCGTGCCAGATTCTTTTCTTCCTTTAGTTTAACTTGTTGGTT GAGAAGGGAAACATTGTCATGCCAAGCACGGTGGTAGCAGAATTAGAGAGAATCATGTGCAATT TTTTCTGGGAAGGGCAAAAAGGCAGCAAAATAATTCACTTGGTAAATTGGAAACCTTGCTCACA AACTATGGAGACTGGGTGTCTTGGTGTGGGAAACCTGAAAAACAGAAACTTGGCTCTTCTATTT AAATGGAATTGGAGATTTTTAAAGGATCCAAATGCATTTTGGTGCAAAATAGCGAGAAGCATCC ATGGATCTAACTCCTCCCAATGGCACTCTTCTGGAAAATCTGGTCTAAGTCTTCGCAGCCCCGG GATTAGTATATAAAAAATTTGGTGTTCATTGAACCATCATGTATCTTTCAAGCTAGGTGATGGC CAAAAATCACATTCTGGAAGGATCCTTGGTGCTTAGCAGTTAGCCCAATCCTTCAGTCATGCTT TCCCCAATCTCTTCCGAATTGCAGCCAATCCCGTGGCCAAGGTTATTGCAAATTGGGACTCTTC AACATCTTTATGGAGCCCCTCTTTTCGCTGAGCACTAAAAGATGAGGAAATTGAAGAATTTCAG CTTCTAATCGGTGGTCTACAAGGTAAAGCCATTTCCTTAGCCTTAGATTCAAGAGCGTGGTCCT TGGATTCTTCAGAAACTTTCTTGGTAAAATCTTTTAAGTTCTTAACTGCCTCTTCACAGATTGA TAAATGAATTCAGCAAGCTCTATGAAAATCTAAGAGCCCAAAGAGACTAAACATTCTGGTCTGG TTTACGTTGTTTGGAATCTTAAACTGTGCGGCAACTCTTCAACAAAAACTCCAAGCTCATTCCC CTTCAGTTTGTCCACTTTGTCATGCTGCAGGAGAGGATCTTCAACATCTTTTCTTCGTTTACTC TTACTCTCGTGAATGTTGGTGAAAGCTATTCTCACTTTTTCAGATTTCGTGGGTGTTTGGCTTT TGCTTTAAAGACAATATACTTTCAGTGTTCAGTGACCCATCCCTTCCTAAAAAATCGAATATCT TATGGTCTAATGCAGTCAAAGCACTGCTATTGGAACTTTGTTTTGAAAGAAATCAGAGAGTTTT CCATGATAACATACCTTGCATGGTCTGACTTGTTTGCCTCAGCATGACTCCTAGCTTCCTCTTG GTTATCTCTCTCGGCTTTTCACAGATTATTCAATTCAAGAAATTTGCCTAAACTCGAATGCTTT CCTTTTTACATTATAATGTATTTCCATTGACCTTTGTTGAGCTTTCCACTTCAATGTATTTTCT CCGTACTGTTTCTTATGTTCCTTGGATGTTTCTTCTGTTGTAACAAGGCTGTACATAAGTTATC CTATTTGTATCCATTTTACTATCAGGAAGTCTTTGTTTCCTTTTCACAAAAGAAAAAAAGAAAA AGAAAAAGAGAAATGGAAACAATTTAATTGATAAATGAAATAAAGGAGGAAGAACTCCAAGTCA CCCAACGATTACATAAAATTTTGTCAGTGGAAAAATAAACAAGAAAGACTATAAAAAAAGGGCC TATAAAGTTTACACTAATACAAATCATATGAATTTTAAATTAGTCGATTGACCCGTAAGTTTAA GCTTACGAGTGAAGGTAAATTTAATATTATATCATTTAACACTTTTCCTCGGCTTGAAATCTAA TGTTAATTGGAGGGGAAATAGCATTGCAGAGGTTTGAGTGTAGGACATCTTGAACCACTTGCTC TGGTACCATCTAAATCACCAATTAATCCAAAAGCTCAATCTTATGGGTGAAGGTAAATTTAATA TCATATCATTCAATTAAACAAGACAAATGCAAATCCACACCACTGTCGTTGGAGGAAAATGAAT CTCGGAAGTGTTGCCCTTTAGAATACAAGGGGCCTAACATCGGCAGAAAACAAGCGTACAAAAC AATTTTGCCAAGGGAAAAGAGGTCCTCTTTAATATCTGTAAAATGATGGAGGAACTTATCTTGG ACCTTCTCTTTTAGGTTTGTTTGCCACTTGAATTAGAGAGCTCTCTTGGGTATAACGGGTCTCG GAAGGGTTTGGAATTTTACTAATTTTTAGCATCCCTTATCCCCTTTTTCTGGACTCCAATAGTT GAATCTCCTGCTTAAATGTAATGTGTGTGTGTGTGTTTTGATATAAATATATTTGGGTGGTTTC GGTTGATTCAGAGTGATTCCTGTTCTTACGTCTTCTTTATAATTTCATTTGTCATTATTTATAG CTTTAAGTGTCTAACTGCAATTATTCTTATGTTGTATTTGTAGCCATGGTTTCACAAGTATCAA CATCTAATAGTTCCACGGCAATAGGCTTTGATGAGAGAATGTTGCTGCATTCAGAAGTATGGGA CTTCGTTCAGAACTTTTTATTTTGTAGATTCTCAAGCATTCAATTTCTTTTTGTCATTTCTTTT GTGTCTTCGGCTCTGATTGTTGGATGCAAATGCATGTATTTTCCTGTGGAAATCTTCATACTTT CAAAGTTTACAGCTATTCTACTCTTTTTTTGATGTAATTTCTTTTTTTGACGTCTAGTTTAATT TACATGTTTGTACTGTGTCTATGTCACATCATACTATAATACTATTGTTCGTGCCTGATTCTGA AAGATTAAACCCGAAATGTGGTGGAAAAATTTCAGATGCAAGTCTTTTTTCAGTTATTTATTTA ATTGATTCGAATTTAATTTAAAAATTGGATCACAGTTCAAAATTCATGTGCAATATGGGGACTG TCTTGTAAGCAGAAGCTCCAATATCAGGAGTCTCTAATTGCAAAAATATGTTTTACTCCCTCTA TGCCGCTCCTATCTGGTGTTTCCTTGACAATAATGTTACAGGGGACCAAAACCTTCCTCTCTTT CATTGTGTCTATGCTAGTTGCAACTAAATGCTGAAGCTTCCTATCCAACTTTTTGGTTTATCCT CCTTCGATAGTACAAGATGGCCATGGCTTTGATTCAGCTGCTATGTGCCGATTTTTTCTAGCAA AGCTCAATTTCTTTGGACAAATGCGGACATGAACCATCCTTTGGAAGTGCTTTGGTATTTAGTT AAATGTTTTGCTTTCTCCTGCCTAATATTTTTGTTTTTATGACAAGGTTTATGCCAACCGAGAG CTGTTTCTAAATTCTGTTGGCCCTGAGGGCAATTCATTTGTGACATATCTATCAATAGTTCCTG CAAATAACATAAAAATCTACACACATGCAACATAGATAGAATATCAACCGAAACAGGAGAAAGG AGAAAAGAAAACGATACTTTAGTCTGGAGAATTGGTTCTCTCCAGAGCCAAACAACCAAAATTC ACACCCTCCCCTGCATATGAAAAACCTACATAAACCTTCAGTCATCAATTTCTGTACCAAAGCA CTACCTTCTGATAAACAACAAACTTACTCTTGCTCAATTACTTTCTTACCCTTCATGGAGTATG TACTCACAATTGGAGGTGATACATCCTTATCATTCCTTCTTCCAATCCTCACTTTTTCAATGGA AATGTAGTTTCTTTGAAAGAAACAAAAAGAAAAAGAAAAAGAAAAATATAACATGCCTACATTA ATATGTTTTTAAGTTTTCTTTTTCTTTTTAAATCTAAATTTAATTAATTTATATTATTCATTTT TATGAATTTATGAAATGGCATGACACTGATCTTATTTTGTAATATTATTGTCATATGTCTTAGT CTGTGGTTTAGTTTCAAAAGGATTTTTGCTTTGTTGTAAACTTTTTAATCTCTAGTTTTCTAGT GCTTTACTTCCTGTCTTGTGGTATTCTTGCTAGAGAAGGTTGAAATGAAGTCACACCCACACCC AGAAAGACCGGATCGTCTGAGAGCTATTGCTGCTAGCTTGGCTACAGCTGGTAATCATTATTTC ATATTTTCTTTTGTTTTTAAGGTAGGAAATAGTTGGGCTGGTGTTTACAATTTAATATGTTGTA ATGTAGTTTATTGCTTTCAACATTTTATCATTGGACTATAAGTTAATTTATTGCTGTAGGAATC TTTCCTGGAAAATGCTATCCAATTCCAGCTAGAGAAATTACCAAAGAAGAACTTGAGATG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.090567021

Conservation Information
Conserved circRNAs	NA
PMCS	0.090567021

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							24948657-24953544(+)
						
						Potential amino acid sequence
						
							MKRTDKAMVSQVSTSNSSTAIGFDERMLLHSEVEMKSHPHPERPDRLRAIAASLATAGIFPGKC
YPIPAREITKEELEMSCGEHKESAILKHGFFAPSFVQDSNFLKTELEMKRTDKAMVSQVSTSNS
STAIGFDERMLLHSEVEMKSHPHPERPDRLRAIAASLATAGIFPGKCYPIPAREITKEELEMSC
GEHKESAILKHGFFAPSFVQDSNFLKTELEMKRTDKAMVSQVSTSNSSTAIGFDERMLLHSEVE
MKSHPHPERPDRLRAIAASLATAGIFPGKCYPIPAREITKEELEMSCGEHKESAILKHGFFAPS
FVQDSNFLKTELEMKRTDKAMVSQVSTSNSSTAIGFDERMLLHSEVEMKSHPHPERPDRLRAIA
ASLATAGIFPGKCYPIPAREITKEELEM
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						responsive to salt stress in root

Functional Information
Coding potential	Y
Potential coding position	24948657-24953544(+)
Potential amino acid sequence	MKRTDKAMVSQVSTSNSSTAIGFDERMLLHSEVEMKSHPHPERPDRLRAIAASLATAGIFPGKC YPIPAREITKEELEMSCGEHKESAILKHGFFAPSFVQDSNFLKTELEMKRTDKAMVSQVSTSNS STAIGFDERMLLHSEVEMKSHPHPERPDRLRAIAASLATAGIFPGKCYPIPAREITKEELEMSC GEHKESAILKHGFFAPSFVQDSNFLKTELEMKRTDKAMVSQVSTSNSSTAIGFDERMLLHSEVE MKSHPHPERPDRLRAIAASLATAGIFPGKCYPIPAREITKEELEMSCGEHKESAILKHGFFAPS FVQDSNFLKTELEMKRTDKAMVSQVSTSNSSTAIGFDERMLLHSEVEMKSHPHPERPDRLRAIA ASLATAGIFPGKCYPIPAREITKEELEM
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	responsive to salt stress in root

			
						 Other Information
					
						References
						Zhu et al., 2019

circRNA

Detail information of Csa1G629160_circ_g.1

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