Plant Circular RNA Database

Detail information of AT4G05190_circ_g.4

			
						 General Information
					
						CircRNA Name
						AT4G05190_circ_g.4
					
						ID in PlantcircBase
						ath_circ_029782
					
						Alias
						NA
					
						Organism
						
							Arabidpsis thaliana						
					
						Position
						
							chr4: 2676115-2677714  JBrowse»						
					
						Reference genome
						
							TAIR10.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							AT4G05190						
					
						Parent gene annotation
						
							Kinesin-like protein KIN-14D
							
						Parent gene strand
						+
					
						Alternative splicing
						
							AT4G05050_circ_g.1 AT4G05050_circ_g.2 4_circ_ag.3 AT4G05050_circ_g.4 AT4G05050_circ_g.5 AT4G05050_circ_g.6 AT4G05050_circ_g.7 AT4G05050_circ_g.8 AT4G05050_circ_g.9 AT4G05050_circ_g.10 AT4G05060_circ_g.1 AT4G05060_circ_g.2 AT4G05060_circ_g.3 AT4G05060_circ_g.4 AT4G05060_circ_g.5 4_circ_ag.6 4_circ_ag.7 4_circ_ag.8 4_circ_ag.9 4_circ_ag.10 4_circ_ag.11 AT4G05150_circ_g.1 AT4G05160_circ_g.1 AT4G05160_circ_g.2 AT4G05160_circ_g.3 AT4G05160_circ_g.4 AT4G05170_circ_g.1 AT4G05180_circ_g.1 AT4G05190_circ_g.1 AT4G05190_circ_g.2 AT4G05190_circ_g.3 AT4G05190_circ_g.5 AT4G05190_circ_g.6 AT4G05190_circ_g.7 AT4G05190_circ_g.8 AT4G05190_circ_g.9 AT4G05320_circ_g.1 AT4G05320_circ_g.2 AT4G05320_circ_g.3 AT4G05320_circ_g.4 AT4G05320_circ_g.5 AT4G05320_circ_g.6 AT4G05320_circ_g.7 AT4G05320_circ_g.8 AT4G05320_circ_g.9 AT4G05320_circ_g.10 AT4G05320_circ_g.11 AT4G05320_circ_g.12 AT4G05320_circ_g.13 AT4G05320_circ_g.14 AT4G05320_circ_g.15 AT4G05320_circ_g.16 AT4G05320_circ_g.17 AT4G05320_circ_g.18 AT4G05320_circ_g.19 AT4G05320_circ_g.20 AT4G05320_circ_g.21 AT4G05320_circ_g.22 AT4G05320_circ_g.23 AT4G05320_circ_g.24 AT4G05320_circ_g.25 AT4G05320_circ_g.26 AT4G05320_circ_g.27 AT4G05320_circ_g.28 AT4G05320_circ_g.29 AT4G05320_circ_g.30 AT4G05320_circ_g.31 AT4G05320_circ_g.32 AT4G05320_circ_g.33 AT4G05320_circ_g.34 AT4G05320_circ_g.35 AT4G05320_circ_g.36 AT4G05320_circ_g.37 AT4G05320_circ_g.38 AT4G05320_circ_g.39 AT4G05320_circ_g.40 AT4G05320_circ_g.41 AT4G05320_circ_g.42 AT4G05320_circ_g.43 AT4G05320_circ_g.44 AT4G05320_circ_g.45 						
					
						Support reads
						1
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						AT4G05190.1:7
AT4G05190.2:7

General Information
CircRNA Name	AT4G05190_circ_g.4
ID in PlantcircBase	ath_circ_029782
Alias	NA
Organism	Arabidpsis thaliana
Position	chr4: 2676115-2677714 JBrowse»
Reference genome	TAIR10.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	AT4G05190
Parent gene annotation	Kinesin-like protein KIN-14D
Parent gene strand	+
Alternative splicing	AT4G05050_circ_g.1 AT4G05050_circ_g.2 4_circ_ag.3 AT4G05050_circ_g.4 AT4G05050_circ_g.5 AT4G05050_circ_g.6 AT4G05050_circ_g.7 AT4G05050_circ_g.8 AT4G05050_circ_g.9 AT4G05050_circ_g.10 AT4G05060_circ_g.1 AT4G05060_circ_g.2 AT4G05060_circ_g.3 AT4G05060_circ_g.4 AT4G05060_circ_g.5 4_circ_ag.6 4_circ_ag.7 4_circ_ag.8 4_circ_ag.9 4_circ_ag.10 4_circ_ag.11 AT4G05150_circ_g.1 AT4G05160_circ_g.1 AT4G05160_circ_g.2 AT4G05160_circ_g.3 AT4G05160_circ_g.4 AT4G05170_circ_g.1 AT4G05180_circ_g.1 AT4G05190_circ_g.1 AT4G05190_circ_g.2 AT4G05190_circ_g.3 AT4G05190_circ_g.5 AT4G05190_circ_g.6 AT4G05190_circ_g.7 AT4G05190_circ_g.8 AT4G05190_circ_g.9 AT4G05320_circ_g.1 AT4G05320_circ_g.2 AT4G05320_circ_g.3 AT4G05320_circ_g.4 AT4G05320_circ_g.5 AT4G05320_circ_g.6 AT4G05320_circ_g.7 AT4G05320_circ_g.8 AT4G05320_circ_g.9 AT4G05320_circ_g.10 AT4G05320_circ_g.11 AT4G05320_circ_g.12 AT4G05320_circ_g.13 AT4G05320_circ_g.14 AT4G05320_circ_g.15 AT4G05320_circ_g.16 AT4G05320_circ_g.17 AT4G05320_circ_g.18 AT4G05320_circ_g.19 AT4G05320_circ_g.20 AT4G05320_circ_g.21 AT4G05320_circ_g.22 AT4G05320_circ_g.23 AT4G05320_circ_g.24 AT4G05320_circ_g.25 AT4G05320_circ_g.26 AT4G05320_circ_g.27 AT4G05320_circ_g.28 AT4G05320_circ_g.29 AT4G05320_circ_g.30 AT4G05320_circ_g.31 AT4G05320_circ_g.32 AT4G05320_circ_g.33 AT4G05320_circ_g.34 AT4G05320_circ_g.35 AT4G05320_circ_g.36 AT4G05320_circ_g.37 AT4G05320_circ_g.38 AT4G05320_circ_g.39 AT4G05320_circ_g.40 AT4G05320_circ_g.41 AT4G05320_circ_g.42 AT4G05320_circ_g.43 AT4G05320_circ_g.44 AT4G05320_circ_g.45
Support reads	1
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	AT4G05190.1:7 AT4G05190.2:7

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CCCTTGCTACCAGATGATGGAGGACGCCAAGAGGCCAGTGTTATTGCCTATCCTACATCAACTG
AATCTCTTGGTAGAGGCATTGATGTGGTCCAAAGTGagttggatgcaaagaccaaagaggaaga
gctacgagcaactataacagagatgaaggagaacatagaatcacttcaggaaaagctgtccaag
gagaagtt

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1005
Transcript exons: 2676115-2676224,2676327-2676446,2676569-2676772,2676874-
2677083,2677158-2677232,2677348-2677494,2677576-2677714
AGTTGGATGCAAAGACCAAAGAGGAAGAGCTACGAGCAACTATAACAGAGATGAAGGAGAACAT
AGAATCACTTCAGGAAAAGCTGTCCAAGGAGAAGTTGAGTAAACTGGATGCAATTGAAAATCAC
AGAAGAGAAAAAGATTGTAGAGTTGTAGCTGAGAAGCTTCAGGTTTCTCTCAGAGAAGAGCTTG
ACAAAGTTAAAGAGGAAAAAATGGCTGCGAAGCAGAAGGTGACGTCTCTAGAAGATATGTACAA
GAGGCTGCAAGAGTACAACACAAGTTTGCAACAATATAACACCAAACTCCAGACTGATCTTGAA
GTAGCTAGAGAGGCTCACACTCGTGCTGAAAAAGAAAAGTCAAGTATACTGGAGAATCTTACTA
CACTAAGAGGTCACAGTAAATCACTACAAGATCAATTAGCATCGAGCCGGGTTTCACAAGATGA
AGCGGTAAAACAAAAGGATTCATTGCTGATGGAAGTTAATAACCTTCAAAGCGAGCTGCAACAA
GTCCGTGATGATCGTGATCGCCATGTTGTACAGTCACAAAAGCTGGCTGGTGAGATACTGATGT
ATAAGGAGAGTGTTGGAAAGTCATCTCATGAGTTGGACATTCTTATAGCCAAATCAGGATCTTT
AGAGGAAACATGTTCGTTGCAAAAAGAGCGTATTAAAATGTTGGAGCAGGAATTAGCTTTTGCT
AAGGAAAAGCTTAAGATGGTGGATTTATCTATGTCTCATACAATGACAGAATTTGAGGAGCAGA
AACAATGTATGCATGAACTGCAAGATCGCCTTGCAGACACGGAGCGTCAACTTTTTGAAGGAGA
GTTATTAAGGAAAAAGCTTCATAACACCATTCTTGAACTCAAAGGAAACATACGCGTGTTCTGC
CGAGTGCGCCCCTTGCTACCAGATGATGGAGGACGCCAAGAGGCCAGTGTTATTGCCTATCCTA
CATCAACTGAATCTCTTGGTAGAGGCATTGATGTGGTCCAAAGTG
						
					

						Genomic sequence
						
							AGTTGGATGCAAAGACCAAAGAGGAAGAGCTACGAGCAACTATAACAGAGATGAAGGAGAACAT
AGAATCACTTCAGGAAAAGCTGTCCAAGGAGAAGTTGAGTAAACTGGTAAGGATTTATCGCTCA
AAGAATCGTTTATCATTGTGCAAACTTATCTCCTAAAGAATCGTTTATCAAGTTTGGTGACTCT
TAATTGGTTATGACTACTAGGATGCAATTGAAAATCACAGAAGAGAAAAAGATTGTAGAGTTGT
AGCTGAGAAGCTTCAGGTTTCTCTCAGAGAAGAGCTTGACAAAGTTAAAGAGGAAAAAATGGCT
GCGAAGCAGAAGGTACTTAAGATTTGCTTTTCGCTAATGTGTTGTTTACTTGTTTCATTCTCTG
TTAACTCCTCTTAGCTCTTGGCTCAATCTTTTAGTTGTTGTGTTAACTGGAATGTTTTCTTTCT
TTCTAGGTGACGTCTCTAGAAGATATGTACAAGAGGCTGCAAGAGTACAACACAAGTTTGCAAC
AATATAACACCAAACTCCAGACTGATCTTGAAGTAGCTAGAGAGGCTCACACTCGTGCTGAAAA
AGAAAAGTCAAGTATACTGGAGAATCTTACTACACTAAGAGGTCACAGTAAATCACTACAAGAT
CAATTAGCATCGAGCCGGGTAAATATCCCTGGTCTACAAACGTGATTCTTGTATTTCTTAATTT
GTGATTGATTTTTCATTGCATCTTACTTCGTTTATCTTCCCCTTTTGTGATCAAGGTTTCACAA
GATGAAGCGGTAAAACAAAAGGATTCATTGCTGATGGAAGTTAATAACCTTCAAAGCGAGCTGC
AACAAGTCCGTGATGATCGTGATCGCCATGTTGTACAGTCACAAAAGCTGGCTGGTGAGATACT
GATGTATAAGGAGAGTGTTGGAAAGTCATCTCATGAGTTGGACATTCTTATAGCCAAATCAGGA
TCTTTAGAGGTTAGTCAAAGTCGACGTTTCACATCCTTGCCTTATATTTTCAATATTCTGACAA
TGTCAATCTTATGCTGCAGGAAACATGTTCGTTGCAAAAAGAGCGTATTAAAATGTTGGAGCAG
GAATTAGCTTTTGCTAAGGAAAAGCTTAAGGTATTATGCGATCAAGTACCTTTGGAATTTTGAT
TGGTGATCTGCCAACTTTCAGATACTCTTTAGTTTGCCAATTGTTTCTTTACACTGACATACGT
TTATTTGCTTTCTACAGATGGTGGATTTATCTATGTCTCATACAATGACAGAATTTGAGGAGCA
GAAACAATGTATGCATGAACTGCAAGATCGCCTTGCAGACACGGAGCGTCAACTTTTTGAAGGA
GAGTTATTAAGGAAAAAGCTTCATAACACCATTCTTGTAAGAAAATGTCGTTTTGGAAACACTT
TTCAGTTATAGTATGACTTTCTTTATGGCCGCTAAGCAAAGCTTTTATTCCAGGAACTCAAAGG
AAACATACGCGTGTTCTGCCGAGTGCGCCCCTTGCTACCAGATGATGGAGGACGCCAAGAGGCC
AGTGTTATTGCCTATCCTACATCAACTGAATCTCTTGGTAGAGGCATTGATGTGGTCCAAAGTG
						
					

			
		

Sequences
Splice junction sequence	CCCTTGCTACCAGATGATGGAGGACGCCAAGAGGCCAGTGTTATTGCCTATCCTACATCAACTG AATCTCTTGGTAGAGGCATTGATGTGGTCCAAAGTGagttggatgcaaagaccaaagaggaaga gctacgagcaactataacagagatgaaggagaacatagaatcacttcaggaaaagctgtccaag gagaagtt
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1005 Transcript exons: 2676115-2676224,2676327-2676446,2676569-2676772,2676874- 2677083,2677158-2677232,2677348-2677494,2677576-2677714 AGTTGGATGCAAAGACCAAAGAGGAAGAGCTACGAGCAACTATAACAGAGATGAAGGAGAACAT AGAATCACTTCAGGAAAAGCTGTCCAAGGAGAAGTTGAGTAAACTGGATGCAATTGAAAATCAC AGAAGAGAAAAAGATTGTAGAGTTGTAGCTGAGAAGCTTCAGGTTTCTCTCAGAGAAGAGCTTG ACAAAGTTAAAGAGGAAAAAATGGCTGCGAAGCAGAAGGTGACGTCTCTAGAAGATATGTACAA GAGGCTGCAAGAGTACAACACAAGTTTGCAACAATATAACACCAAACTCCAGACTGATCTTGAA GTAGCTAGAGAGGCTCACACTCGTGCTGAAAAAGAAAAGTCAAGTATACTGGAGAATCTTACTA CACTAAGAGGTCACAGTAAATCACTACAAGATCAATTAGCATCGAGCCGGGTTTCACAAGATGA AGCGGTAAAACAAAAGGATTCATTGCTGATGGAAGTTAATAACCTTCAAAGCGAGCTGCAACAA GTCCGTGATGATCGTGATCGCCATGTTGTACAGTCACAAAAGCTGGCTGGTGAGATACTGATGT ATAAGGAGAGTGTTGGAAAGTCATCTCATGAGTTGGACATTCTTATAGCCAAATCAGGATCTTT AGAGGAAACATGTTCGTTGCAAAAAGAGCGTATTAAAATGTTGGAGCAGGAATTAGCTTTTGCT AAGGAAAAGCTTAAGATGGTGGATTTATCTATGTCTCATACAATGACAGAATTTGAGGAGCAGA AACAATGTATGCATGAACTGCAAGATCGCCTTGCAGACACGGAGCGTCAACTTTTTGAAGGAGA GTTATTAAGGAAAAAGCTTCATAACACCATTCTTGAACTCAAAGGAAACATACGCGTGTTCTGC CGAGTGCGCCCCTTGCTACCAGATGATGGAGGACGCCAAGAGGCCAGTGTTATTGCCTATCCTA CATCAACTGAATCTCTTGGTAGAGGCATTGATGTGGTCCAAAGTG
Genomic sequence	AGTTGGATGCAAAGACCAAAGAGGAAGAGCTACGAGCAACTATAACAGAGATGAAGGAGAACAT AGAATCACTTCAGGAAAAGCTGTCCAAGGAGAAGTTGAGTAAACTGGTAAGGATTTATCGCTCA AAGAATCGTTTATCATTGTGCAAACTTATCTCCTAAAGAATCGTTTATCAAGTTTGGTGACTCT TAATTGGTTATGACTACTAGGATGCAATTGAAAATCACAGAAGAGAAAAAGATTGTAGAGTTGT AGCTGAGAAGCTTCAGGTTTCTCTCAGAGAAGAGCTTGACAAAGTTAAAGAGGAAAAAATGGCT GCGAAGCAGAAGGTACTTAAGATTTGCTTTTCGCTAATGTGTTGTTTACTTGTTTCATTCTCTG TTAACTCCTCTTAGCTCTTGGCTCAATCTTTTAGTTGTTGTGTTAACTGGAATGTTTTCTTTCT TTCTAGGTGACGTCTCTAGAAGATATGTACAAGAGGCTGCAAGAGTACAACACAAGTTTGCAAC AATATAACACCAAACTCCAGACTGATCTTGAAGTAGCTAGAGAGGCTCACACTCGTGCTGAAAA AGAAAAGTCAAGTATACTGGAGAATCTTACTACACTAAGAGGTCACAGTAAATCACTACAAGAT CAATTAGCATCGAGCCGGGTAAATATCCCTGGTCTACAAACGTGATTCTTGTATTTCTTAATTT GTGATTGATTTTTCATTGCATCTTACTTCGTTTATCTTCCCCTTTTGTGATCAAGGTTTCACAA GATGAAGCGGTAAAACAAAAGGATTCATTGCTGATGGAAGTTAATAACCTTCAAAGCGAGCTGC AACAAGTCCGTGATGATCGTGATCGCCATGTTGTACAGTCACAAAAGCTGGCTGGTGAGATACT GATGTATAAGGAGAGTGTTGGAAAGTCATCTCATGAGTTGGACATTCTTATAGCCAAATCAGGA TCTTTAGAGGTTAGTCAAAGTCGACGTTTCACATCCTTGCCTTATATTTTCAATATTCTGACAA TGTCAATCTTATGCTGCAGGAAACATGTTCGTTGCAAAAAGAGCGTATTAAAATGTTGGAGCAG GAATTAGCTTTTGCTAAGGAAAAGCTTAAGGTATTATGCGATCAAGTACCTTTGGAATTTTGAT TGGTGATCTGCCAACTTTCAGATACTCTTTAGTTTGCCAATTGTTTCTTTACACTGACATACGT TTATTTGCTTTCTACAGATGGTGGATTTATCTATGTCTCATACAATGACAGAATTTGAGGAGCA GAAACAATGTATGCATGAACTGCAAGATCGCCTTGCAGACACGGAGCGTCAACTTTTTGAAGGA GAGTTATTAAGGAAAAAGCTTCATAACACCATTCTTGTAAGAAAATGTCGTTTTGGAAACACTT TTCAGTTATAGTATGACTTTCTTTATGGCCGCTAAGCAAAGCTTTTATTCCAGGAACTCAAAGG AAACATACGCGTGTTCTGCCGAGTGCGCCCCTTGCTACCAGATGATGGAGGACGCCAAGAGGCC AGTGTTATTGCCTATCCTACATCAACTGAATCTCTTGGTAGAGGCATTGATGTGGTCCAAAGTG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.201489809

Conservation Information
Conserved circRNAs	NA
PMCS	0.201489809

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							2676165-2677711(+)
						
						Potential amino acid sequence
						
							MKENIESLQEKLSKEKLSKLDAIENHRREKDCRVVAEKLQVSLREELDKVKEEKMAAKQKVTSL
EDMYKRLQEYNTSLQQYNTKLQTDLEVAREAHTRAEKEKSSILENLTTLRGHSKSLQDQLASSR
VSQDEAVKQKDSLLMEVNNLQSELQQVRDDRDRHVVQSQKLAGEILMYKESVGKSSHELDILIA
KSGSLEETCSLQKERIKMLEQELAFAKEKLKMVDLSMSHTMTEFEEQKQCMHELQDRLADTERQ
LFEGELLRKKLHNTILELKGNIRVFCRVRPLLPDDGGRQEASVIAYPTSTESLGRGIDVVQSEL
DAKTKEEELRATITEMKENIESLQEKLSKEKLSKLDAIENHRREKDCRVVAEKLQVSLREELDK
VKEEKMAAKQKVTSLEDMYKRLQEYNTSLQQYNTKLQTDLEVAREAHTRAEKEKSSILENLTTL
RGHSKSLQDQLASSRVSQDEAVKQKDSLLMEVNNLQSELQQVRDDRDRHVVQSQKLAGEILMYK
ESVGKSSHELDILIAKSGSLEETCSLQKERIKMLEQELAFAKEKLKMVDLSMSHTMTEFEEQKQ
CMHELQDRLADTERQLFEGELLRKKLHNTILELKGNIRVFCRVRPLLPDDGGRQEASVIAYPTS
TESLGRGIDVVQSELDAKTKEEELRATITEMKENIESLQEKLSKEKLSKLDAIENHRREKDCRV
VAEKLQVSLREELDKVKEEKMAAKQKVTSLEDMYKRLQEYNTSLQQYNTKLQTDLEVAREAHTR
AEKEKSSILENLTTLRGHSKSLQDQLASSRVSQDEAVKQKDSLLMEVNNLQSELQQVRDDRDRH
VVQSQKLAGEILMYKESVGKSSHELDILIAKSGSLEETCSLQKERIKMLEQELAFAKEKLKMVD
LSMSHTMTEFEEQKQCMHELQDRLADTERQLFEGELLRKKLHNTILELKGNIRVFCRVRPLLPD
DGGRQEASVIAYPTSTESLGRGIDVVQSELDAKTKEEELRATITEMKENIESLQEKLSKEKLSK
LDAIENHRREKDCRVVAEKLQVSLREELDKVKEEKMAAKQKVTSLEDMYKRLQEYNTSLQQYNT
KLQTDLEVAREAHTRAEKEKSSILENLTTLRGHSKSLQDQLASSRVSQDEAVKQKDSLLMEVNN
LQSELQQVRDDRDRHVVQSQKLAGEILMYKESVGKSSHELDILIAKSGSLEETCSLQKERIKML
EQELAFAKEKLKMVDLSMSHTMTEFEEQKQCMHELQDRLADTERQLFEGELLRKKLHNTILELK
GNIRVFCRVRPLLPDDGGRQEASVIAYPTSTESLGRGIDVVQS(+)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	2676165-2677711(+)
Potential amino acid sequence	MKENIESLQEKLSKEKLSKLDAIENHRREKDCRVVAEKLQVSLREELDKVKEEKMAAKQKVTSL EDMYKRLQEYNTSLQQYNTKLQTDLEVAREAHTRAEKEKSSILENLTTLRGHSKSLQDQLASSR VSQDEAVKQKDSLLMEVNNLQSELQQVRDDRDRHVVQSQKLAGEILMYKESVGKSSHELDILIA KSGSLEETCSLQKERIKMLEQELAFAKEKLKMVDLSMSHTMTEFEEQKQCMHELQDRLADTERQ LFEGELLRKKLHNTILELKGNIRVFCRVRPLLPDDGGRQEASVIAYPTSTESLGRGIDVVQSEL DAKTKEEELRATITEMKENIESLQEKLSKEKLSKLDAIENHRREKDCRVVAEKLQVSLREELDK VKEEKMAAKQKVTSLEDMYKRLQEYNTSLQQYNTKLQTDLEVAREAHTRAEKEKSSILENLTTL RGHSKSLQDQLASSRVSQDEAVKQKDSLLMEVNNLQSELQQVRDDRDRHVVQSQKLAGEILMYK ESVGKSSHELDILIAKSGSLEETCSLQKERIKMLEQELAFAKEKLKMVDLSMSHTMTEFEEQKQ CMHELQDRLADTERQLFEGELLRKKLHNTILELKGNIRVFCRVRPLLPDDGGRQEASVIAYPTS TESLGRGIDVVQSELDAKTKEEELRATITEMKENIESLQEKLSKEKLSKLDAIENHRREKDCRV VAEKLQVSLREELDKVKEEKMAAKQKVTSLEDMYKRLQEYNTSLQQYNTKLQTDLEVAREAHTR AEKEKSSILENLTTLRGHSKSLQDQLASSRVSQDEAVKQKDSLLMEVNNLQSELQQVRDDRDRH VVQSQKLAGEILMYKESVGKSSHELDILIAKSGSLEETCSLQKERIKMLEQELAFAKEKLKMVD LSMSHTMTEFEEQKQCMHELQDRLADTERQLFEGELLRKKLHNTILELKGNIRVFCRVRPLLPD DGGRQEASVIAYPTSTESLGRGIDVVQSELDAKTKEEELRATITEMKENIESLQEKLSKEKLSK LDAIENHRREKDCRVVAEKLQVSLREELDKVKEEKMAAKQKVTSLEDMYKRLQEYNTSLQQYNT KLQTDLEVAREAHTRAEKEKSSILENLTTLRGHSKSLQDQLASSRVSQDEAVKQKDSLLMEVNN LQSELQQVRDDRDRHVVQSQKLAGEILMYKESVGKSSHELDILIAKSGSLEETCSLQKERIKML EQELAFAKEKLKMVDLSMSHTMTEFEEQKQCMHELQDRLADTERQLFEGELLRKKLHNTILELK GNIRVFCRVRPLLPDDGGRQEASVIAYPTSTESLGRGIDVVQS(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of AT4G05190_circ_g.4

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