Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G02990_circ_g.1 |
ID in PlantcircBase | ath_circ_000364 |
Alias | 1:682243-682892 |
Organism | Arabidpsis thaliana |
Position | chr1: 682243-682892 JBrowse» |
Reference genome | TAIR10.38 |
Type | u-circRNA |
Identification method | find_circ; CIRI2 |
Parent gene | AT1G02990 |
Parent gene annotation |
BEST Arabidopsis thaliana protein match is: CW-type Zinc Finger (TAIR:AT3G62900.1) |
Parent gene strand | - |
Alternative splicing | AT1G02990_circ_g.2 |
Support reads | 2 |
Tissues | root |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT1G02990.5:2 AT1G02990.3:2 AT1G02990.6:2 AT1G02990.4:2 AT1G02990.2:2 AT1G02990.1:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.198856045 |
Functional Information | |
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Coding potential | NA |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Philips et al., 2020 |