Plant Circular RNA Database

Detail information of orai.005G134900_circ_g.1

			
						 General Information
					
						CircRNA Name
						orai.005G134900_circ_g.1
					
						ID in PlantcircBase
						gra_circ_000489
					
						Alias
						Chr05:34265772|34270053
					
						Organism
						
							Gossypium raimondii						
					
						Position
						
							chrChr05: 34265772-34270053  JBrowse»						
					
						Reference genome
						
							Graimondii_221						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRI
					
						Parent gene
						
							Gorai.005G134900						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						-
					
						Alternative splicing
						
							NA						
					
						Support reads
						2
					
						Tissues
						ovule
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Gorai.005G134900.1:4
Gorai.005G134900.2:4

General Information
CircRNA Name	orai.005G134900_circ_g.1
ID in PlantcircBase	gra_circ_000489
Alias	Chr05:34265772\|34270053
Organism	Gossypium raimondii
Position	chrChr05: 34265772-34270053 JBrowse»
Reference genome	Graimondii_221
Type	e-circRNA
Identification method	CIRI
Parent gene	Gorai.005G134900
Parent gene annotation	NA
Parent gene strand	-
Alternative splicing	NA
Support reads	2
Tissues	ovule
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Gorai.005G134900.1:4 Gorai.005G134900.2:4

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AATGAGAACAAGTATTCGCATACATCTTCATATAATATCTCTGTCATAAATTGCTCATCCACTT
CTTCATTAGGTTCCTCATAAAAATTAGTGACTGCACctgggagcaccattgtaaaaacatcatc
tataatttcaataccagcagcccatccagcagccaagtcttcaaacaaagccgccgcacaaact
agggcaac

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 996
Transcript exons: 34265772-34266123,34266821-34266931,34268372-34268732,34
269882-34270053
CTGGGAGCACCATTGTAAAAACATCATCTATAATTTCAATACCAGCAGCCCATCCAGCAGCCAA
GTCTTCAAACAAAGCCGCCGCACAAACTAGGGCAACTGACTGATCATCAATAAAACCTCGCACC
CATTTTGATCTTAATGAGTTTATTTTTTCTTTAAACCCTTGCCGTGCTCTCAGTAGTTGCAAGC
TTGATGGATGAGAGTTGAATGGACCATATGTCGCACTACTTCCTAGGCAAGAGAGAATATGCAT
TGCACGTGACAATGAATCTGATTTACTCCCATTACTGTTTCCAAGCTCAGCCTCAGCATACCAT
AAATATGGAAGAGAAGAATTAGACTGTAGATCCAATGAAACCCCAGCAAGTGACAGCAATGCCA
TGTCAAACACTCTTCTGGCATTATCCATATTCCCATAAAAAGCCTCTCTACGTGCATAAATTCC
ACAAAGCAAGAGATCCTGCCGATCACGTTTTAGAAGGCGCTTCGCCAAAGATTGACACGGAGCA
CCTGAACAGCTAGAAGAGTTCATTCTTGTCACAAAGAGCTCTTCCGCCAACAGAGCAGCTTCTT
CCAATATATGGTTACGGGGGAAAGCAGTTAAACAAAGTAACGCAGCATTACGAAGAAATTTCAT
CATTTCAGTCCTCTGAGGGATGCCTCTGGCACCATCGAAAAGGAATTCAAAACAGAATTCACCA
GACATACTCTGTGATTTGTTTAACTCATCCTGCAGTCTTCTCATATTTTGCCAAATACAATCTG
GTAACTCCTCCAGGCTAAGAATTTTCTCGGTCCAACTGGAACTGTTGGTACAAACCCAAGAGGA
TATTTTCCCACCATAAAAGTCAATGAACTGGAATACTAGAGATAAGCGAGCCTCAGTCGAGCTC
AATGAGAACAAGTATTCGCATACATCTTCATATAATATCTCTGTCATAAATTGCTCATCCACTT
CTTCATTAGGTTCCTCATAAAAATTAGTGACTGCAC
						
					

						Genomic sequence
						
							CTGGGAGCACCATTGTAAAAACATCATCTATAATTTCAATACCAGCAGCCCATCCAGCAGCCAA
GTCTTCAAACAAAGCCGCCGCACAAACTAGGGCAACTGACTGATCATCAATAAAACCTCGCACC
CATTTTGATCTTAATGAGTTTATTTTTTCTTTAAACCCTTGCCGTGCTCTCAGTAGTTGCAAGC
TTGATGGATGAGAGTTGAATGGACCATATGTCGCACTACTTCCTAGGCAAGAGAGAATATGCAT
TGCACGTGACAATGAATCTGATTTACTCCCATTACTGTTTCCAAGCTCAGCCTCAGCATACCAT
AAATATGGAAGAGAAGAATTAGACTGTAGATCCTGCTTATGTAAATAAGAGTATATCATTACAC
TGAAAAAACTCAAAGATGATTAAACTATTACATTTAAGCACACATAAAATGAGTAAAAACGTTC
AGATGTCAGATCTTATGTTATTTGAACTTGGGTACGAGTGTTATGCTCAATTTTTTGCAAACTT
TTTCATGTATTGGAAGCTTATATCCCTATATCCATGTCCGACTATGAACCAGATGCAAGAACTT
CAAGAAGAGTAAAGAGTCGGATATATTGTAAACTTCAAGCATTTCTTTTTGCACAAACGGGAGG
AAAGTGAATCAGAGAAATAAACACATCAAGAAACAGTTTAGAACAGCAAATTACCATAGAAAGC
TCAGTGGAAAAGAAATAGAGTCCACTTTGGGTATAATGCGTAACCATAAAAGCATCACACAATC
TATGGTACCAAACATGAACATCATATTTATTAACCATATGGCATATTGTCAAACAGCTGCATAA
ATTAAAAATCAAGCAAAACCTAGATTGAATATAAAGCAATGTATAAGAAATTGTGTCCACTTTA
GGTATTAATGGAAGAATAAAACATAATTCTTGAGCTAGATGAAACTTGAAAAAAAATTTGTTAA
AAACATAATTCTTTTGTCCATGGAAAGCAGAGGTCAGCTTCAACATTCAACCTATTGGGTTAAC
AGTCATCAGAAAACTAAGAGCTCACCAATGAAACCCCAGCAAGTGACAGCAATGCCATGTCAAA
CACTCTTCTGGCATTATCCATATTCCCATAAAAAGCCTCTCTACGTGCATAAATTCCACAAAGC
AAGAGATCCTACAATCACAAAGTACTAAATCTTCATATTGCAATGGAGAAAGTCAGGAACACAA
AATTACATATACATATTCATTTCAATTTAGAAGATTCACACAATGTCAGGCTATAAACATGTTA
AAACTTTGCAATGCTCCCTCATAATCCTGAACTAGTTCCAGTATTGCTTTCTATTTGTTTTAAT
AGCTAGACTCAATCAAATTATGAACAAGTTAATCTTTGAATTCCACAAAGCAAGAGATCCTACA
ATCACAAAGTACTAAAGCTTCATATTGCAATGGAGAAAGTCGAAACACGACATTACATATACAT
ATTCATTTCAATTTAGAAGATTCACACAATGTCAGGCTATAAAAATGTTAAAACTTTACAATAC
TCCCTCATAATCCTGAACTTGTTCCAGTATTGCTTTCTATTTGTTTTAATAGCTAGACTCAATC
AAATTATGAACACATTAATCTTTAATTGCTCCATCATTCCTAAACTTGTTCCAGAATTACTTTC
TACTTATTTTACAATTCTAGCCTTAATGAAATGCACATATATTTATTTAGACATCATTTGATTC
TAGTTTTTACTACTTGATTTTTTTTCTCTTTGCTTTTGCTTCCTAGAAAATTGCTAAACAGAAA
AAGCAATTGGAAAAACAAAAACCTTATTGATTGAAAATTAACACATAACTATAATGCAATATCA
ATTGAACCAGTTATACAAAAAATAAAAGGAAAAACATGCACTATGTTCTCCAAAAAATTATAAT
GTTAATTTTAAATTGTCCAACTAAATTATTTTCTTTATTAACAAATATATTTCCTTATGAAAGC
AAAAAATTAGTAGCCAAAGCCATATAACAAAATGAAATTAAAAGGTCAGAATGAGAAAGGGAAA
GAGAAGTCATGAATAATTTGAAGTAAAACCATCCCAATCTATAGTAGAAATAGCTTAAAAAGAA
TATTTCCCTATATTGAGTAAAGCAACAAAATACAAAACATAAAAATTGACACCACTAATAAAGT
AGCGGCTACACAATTTAGCATTTATAAGTGGATAAAGACTAATTATTCCACTGAGCACCACATA
AACTTAGCAATCTAAGATTACATTCAAACAAAAAAATAACTTGAGAAATAACTATAAAAACTTG
GAAGCAAACTTGTATCCTCTGACCAAGTGAAGGAACTCAGATGGAAACTTAAATTTCTATAAGC
AACTGCATTATTTCTTCCTAATGACTGAGGAAACCTTACAGACACTCATGGGTAACATCACTAC
TGCTAGTGGTTAAGGGAAACAATATAAACTTTAACTTAGGCTCATGGTAAATGGAAAAACAAAT
CAGGCATTTCATGTTAATAATTAAAAAATATTTGCTAAGCAAGTACAGGATCCAATCTGTATGT
ATATGTACACCTTTAGGCAGGTAGAACAAATAAAAAATACCTGCCGATCACGTTTTAGAAGGCG
CTTCGCCAAAGATTGACACGGAGCACCTGAACAGCTAGAAGAGTTCATTCTTGTCACAAAGAGC
TCTTCCGCCAACAGAGCAGCTTCTTCCAATATATGGTTACGGGGGAAAGCAGTTAAACAAAGTA
ACGCAGCATTACGAAGAAATTTCATCATTTCAGTCCTCTGAGGGATGCCTCTGGCACCATCGAA
AAGGAATTCAAAACAGAATTCACCAGACATACTCTGTGATTTGTTTAACTCATCCTGCAGTCTT
CTCATATTTTGCCAAATACAATCTGGTAACTCCTCCAGGCTAAGAATTTTCTCGGTCCAACTGG
AACTGTTGGTACAAACCCTAGAAGAGGAGGAAGGAAGTTAGTTAAATAACATTAACTCAAAAAA
CATGAAACCATTAACATATTAATGCACACATCATGGTGTTAGATTTTAACACTCCCATGCAGCC
CTCCTCCTTAAACAGGCTAAAACCAGGTCACTGTTGCATTAACTCTAATATGGAGCATCATGCC
TTCACAAGCTTAAACAAAAACCAATAGAATAGAGACCCATCAGTTCTTATATAAAATTTTGGCC
AGCTTTAAGGACTTGGAAAATGCAACTTCCAGTTGGCTTTTTCCCACATGGAAGCATCCTGAGA
AAGAACTATGACAATCCTACCCTCCAAAATAGATGGAAAATTCTACAAAATAAATTATCAGCCT
AATCATTTCATCTACTTTCCAGGTAAAATTGTTTTCCTTCAACAAATAGAATTATTTGACATTC
AACTATTTTAGCTAGATTAGAGCTTCTAAGAAACAAGTTCCAACTCAATATATGTTTGAAAAGT
TGTCAAAGTGGAATACATAATTACCTAGAACTTAAAATCCAGTGAAGGCTCAAAAAACTCTAAA
CGAATTTCCAAGACTGAAAACATAAAAAAAATTAAATAAATTCATGGGCTTTCCACATTTTTAA
TTACAGAACAACGAACACATATTATTTCCCTTTAGTAACATAGATAAGCCTATTCATTATACAA
GCACTCTTTCTTAAATACAATAAAACTATAATGGTTCTCTGTCGTTAGATTACTAATCTCCAAC
CATTTGGGGGTCCAAATCAGAAAATATATATGCAAAATTATCAGTAACAAGCTATATTACCATT
ACACATTCTGTATTCCTAAGCATACCATACTGTAATTTTATGATATATATTTTAGAAAGTTATT
CCATAACAGATAAAGGTACTTTGAACGAAAAAGAAAATTCAGAAGACATGTAAATACTTGGTAT
GAAGCAGCAAGTATCCACATATTTCAGCCACACATGAGAACCAAATTTTTAATTATTTGATATG
CGTGCAAATTTACATATGCAAGTTAAGAAATAGACAAACAGACAAGATGGGTCGATCAAAGACC
AGTGAGAGAGCAAAATGGAATAAGAAGATTTGACACAAAACTGCACCATTATAAAATGGTGAAT
AAGGTGAAACTTACCAAGAGGATATTTTCCCACCATAAAAGTCAATGAACTGGAATACTAGAGA
TAAGCGAGCCTCAGTCGAGCTCAATGAGAACAAGTATTCGCATACATCTTCATATAATATCTCT
GTCATAAATTGCTCATCCACTTCTTCATTAGGTTCCTCATAAAAATTAGTGACTGCAC
						
					

			
		

Sequences
Splice junction sequence	AATGAGAACAAGTATTCGCATACATCTTCATATAATATCTCTGTCATAAATTGCTCATCCACTT CTTCATTAGGTTCCTCATAAAAATTAGTGACTGCACctgggagcaccattgtaaaaacatcatc tataatttcaataccagcagcccatccagcagccaagtcttcaaacaaagccgccgcacaaact agggcaac
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 996 Transcript exons: 34265772-34266123,34266821-34266931,34268372-34268732,34 269882-34270053 CTGGGAGCACCATTGTAAAAACATCATCTATAATTTCAATACCAGCAGCCCATCCAGCAGCCAA GTCTTCAAACAAAGCCGCCGCACAAACTAGGGCAACTGACTGATCATCAATAAAACCTCGCACC CATTTTGATCTTAATGAGTTTATTTTTTCTTTAAACCCTTGCCGTGCTCTCAGTAGTTGCAAGC TTGATGGATGAGAGTTGAATGGACCATATGTCGCACTACTTCCTAGGCAAGAGAGAATATGCAT TGCACGTGACAATGAATCTGATTTACTCCCATTACTGTTTCCAAGCTCAGCCTCAGCATACCAT AAATATGGAAGAGAAGAATTAGACTGTAGATCCAATGAAACCCCAGCAAGTGACAGCAATGCCA TGTCAAACACTCTTCTGGCATTATCCATATTCCCATAAAAAGCCTCTCTACGTGCATAAATTCC ACAAAGCAAGAGATCCTGCCGATCACGTTTTAGAAGGCGCTTCGCCAAAGATTGACACGGAGCA CCTGAACAGCTAGAAGAGTTCATTCTTGTCACAAAGAGCTCTTCCGCCAACAGAGCAGCTTCTT CCAATATATGGTTACGGGGGAAAGCAGTTAAACAAAGTAACGCAGCATTACGAAGAAATTTCAT CATTTCAGTCCTCTGAGGGATGCCTCTGGCACCATCGAAAAGGAATTCAAAACAGAATTCACCA GACATACTCTGTGATTTGTTTAACTCATCCTGCAGTCTTCTCATATTTTGCCAAATACAATCTG GTAACTCCTCCAGGCTAAGAATTTTCTCGGTCCAACTGGAACTGTTGGTACAAACCCAAGAGGA TATTTTCCCACCATAAAAGTCAATGAACTGGAATACTAGAGATAAGCGAGCCTCAGTCGAGCTC AATGAGAACAAGTATTCGCATACATCTTCATATAATATCTCTGTCATAAATTGCTCATCCACTT CTTCATTAGGTTCCTCATAAAAATTAGTGACTGCAC
Genomic sequence	CTGGGAGCACCATTGTAAAAACATCATCTATAATTTCAATACCAGCAGCCCATCCAGCAGCCAA GTCTTCAAACAAAGCCGCCGCACAAACTAGGGCAACTGACTGATCATCAATAAAACCTCGCACC CATTTTGATCTTAATGAGTTTATTTTTTCTTTAAACCCTTGCCGTGCTCTCAGTAGTTGCAAGC TTGATGGATGAGAGTTGAATGGACCATATGTCGCACTACTTCCTAGGCAAGAGAGAATATGCAT TGCACGTGACAATGAATCTGATTTACTCCCATTACTGTTTCCAAGCTCAGCCTCAGCATACCAT AAATATGGAAGAGAAGAATTAGACTGTAGATCCTGCTTATGTAAATAAGAGTATATCATTACAC TGAAAAAACTCAAAGATGATTAAACTATTACATTTAAGCACACATAAAATGAGTAAAAACGTTC AGATGTCAGATCTTATGTTATTTGAACTTGGGTACGAGTGTTATGCTCAATTTTTTGCAAACTT TTTCATGTATTGGAAGCTTATATCCCTATATCCATGTCCGACTATGAACCAGATGCAAGAACTT CAAGAAGAGTAAAGAGTCGGATATATTGTAAACTTCAAGCATTTCTTTTTGCACAAACGGGAGG AAAGTGAATCAGAGAAATAAACACATCAAGAAACAGTTTAGAACAGCAAATTACCATAGAAAGC TCAGTGGAAAAGAAATAGAGTCCACTTTGGGTATAATGCGTAACCATAAAAGCATCACACAATC TATGGTACCAAACATGAACATCATATTTATTAACCATATGGCATATTGTCAAACAGCTGCATAA ATTAAAAATCAAGCAAAACCTAGATTGAATATAAAGCAATGTATAAGAAATTGTGTCCACTTTA GGTATTAATGGAAGAATAAAACATAATTCTTGAGCTAGATGAAACTTGAAAAAAAATTTGTTAA AAACATAATTCTTTTGTCCATGGAAAGCAGAGGTCAGCTTCAACATTCAACCTATTGGGTTAAC AGTCATCAGAAAACTAAGAGCTCACCAATGAAACCCCAGCAAGTGACAGCAATGCCATGTCAAA CACTCTTCTGGCATTATCCATATTCCCATAAAAAGCCTCTCTACGTGCATAAATTCCACAAAGC AAGAGATCCTACAATCACAAAGTACTAAATCTTCATATTGCAATGGAGAAAGTCAGGAACACAA AATTACATATACATATTCATTTCAATTTAGAAGATTCACACAATGTCAGGCTATAAACATGTTA AAACTTTGCAATGCTCCCTCATAATCCTGAACTAGTTCCAGTATTGCTTTCTATTTGTTTTAAT AGCTAGACTCAATCAAATTATGAACAAGTTAATCTTTGAATTCCACAAAGCAAGAGATCCTACA ATCACAAAGTACTAAAGCTTCATATTGCAATGGAGAAAGTCGAAACACGACATTACATATACAT ATTCATTTCAATTTAGAAGATTCACACAATGTCAGGCTATAAAAATGTTAAAACTTTACAATAC TCCCTCATAATCCTGAACTTGTTCCAGTATTGCTTTCTATTTGTTTTAATAGCTAGACTCAATC AAATTATGAACACATTAATCTTTAATTGCTCCATCATTCCTAAACTTGTTCCAGAATTACTTTC TACTTATTTTACAATTCTAGCCTTAATGAAATGCACATATATTTATTTAGACATCATTTGATTC TAGTTTTTACTACTTGATTTTTTTTCTCTTTGCTTTTGCTTCCTAGAAAATTGCTAAACAGAAA AAGCAATTGGAAAAACAAAAACCTTATTGATTGAAAATTAACACATAACTATAATGCAATATCA ATTGAACCAGTTATACAAAAAATAAAAGGAAAAACATGCACTATGTTCTCCAAAAAATTATAAT GTTAATTTTAAATTGTCCAACTAAATTATTTTCTTTATTAACAAATATATTTCCTTATGAAAGC AAAAAATTAGTAGCCAAAGCCATATAACAAAATGAAATTAAAAGGTCAGAATGAGAAAGGGAAA GAGAAGTCATGAATAATTTGAAGTAAAACCATCCCAATCTATAGTAGAAATAGCTTAAAAAGAA TATTTCCCTATATTGAGTAAAGCAACAAAATACAAAACATAAAAATTGACACCACTAATAAAGT AGCGGCTACACAATTTAGCATTTATAAGTGGATAAAGACTAATTATTCCACTGAGCACCACATA AACTTAGCAATCTAAGATTACATTCAAACAAAAAAATAACTTGAGAAATAACTATAAAAACTTG GAAGCAAACTTGTATCCTCTGACCAAGTGAAGGAACTCAGATGGAAACTTAAATTTCTATAAGC AACTGCATTATTTCTTCCTAATGACTGAGGAAACCTTACAGACACTCATGGGTAACATCACTAC TGCTAGTGGTTAAGGGAAACAATATAAACTTTAACTTAGGCTCATGGTAAATGGAAAAACAAAT CAGGCATTTCATGTTAATAATTAAAAAATATTTGCTAAGCAAGTACAGGATCCAATCTGTATGT ATATGTACACCTTTAGGCAGGTAGAACAAATAAAAAATACCTGCCGATCACGTTTTAGAAGGCG CTTCGCCAAAGATTGACACGGAGCACCTGAACAGCTAGAAGAGTTCATTCTTGTCACAAAGAGC TCTTCCGCCAACAGAGCAGCTTCTTCCAATATATGGTTACGGGGGAAAGCAGTTAAACAAAGTA ACGCAGCATTACGAAGAAATTTCATCATTTCAGTCCTCTGAGGGATGCCTCTGGCACCATCGAA AAGGAATTCAAAACAGAATTCACCAGACATACTCTGTGATTTGTTTAACTCATCCTGCAGTCTT CTCATATTTTGCCAAATACAATCTGGTAACTCCTCCAGGCTAAGAATTTTCTCGGTCCAACTGG AACTGTTGGTACAAACCCTAGAAGAGGAGGAAGGAAGTTAGTTAAATAACATTAACTCAAAAAA CATGAAACCATTAACATATTAATGCACACATCATGGTGTTAGATTTTAACACTCCCATGCAGCC CTCCTCCTTAAACAGGCTAAAACCAGGTCACTGTTGCATTAACTCTAATATGGAGCATCATGCC TTCACAAGCTTAAACAAAAACCAATAGAATAGAGACCCATCAGTTCTTATATAAAATTTTGGCC AGCTTTAAGGACTTGGAAAATGCAACTTCCAGTTGGCTTTTTCCCACATGGAAGCATCCTGAGA AAGAACTATGACAATCCTACCCTCCAAAATAGATGGAAAATTCTACAAAATAAATTATCAGCCT AATCATTTCATCTACTTTCCAGGTAAAATTGTTTTCCTTCAACAAATAGAATTATTTGACATTC AACTATTTTAGCTAGATTAGAGCTTCTAAGAAACAAGTTCCAACTCAATATATGTTTGAAAAGT TGTCAAAGTGGAATACATAATTACCTAGAACTTAAAATCCAGTGAAGGCTCAAAAAACTCTAAA CGAATTTCCAAGACTGAAAACATAAAAAAAATTAAATAAATTCATGGGCTTTCCACATTTTTAA TTACAGAACAACGAACACATATTATTTCCCTTTAGTAACATAGATAAGCCTATTCATTATACAA GCACTCTTTCTTAAATACAATAAAACTATAATGGTTCTCTGTCGTTAGATTACTAATCTCCAAC CATTTGGGGGTCCAAATCAGAAAATATATATGCAAAATTATCAGTAACAAGCTATATTACCATT ACACATTCTGTATTCCTAAGCATACCATACTGTAATTTTATGATATATATTTTAGAAAGTTATT CCATAACAGATAAAGGTACTTTGAACGAAAAAGAAAATTCAGAAGACATGTAAATACTTGGTAT GAAGCAGCAAGTATCCACATATTTCAGCCACACATGAGAACCAAATTTTTAATTATTTGATATG CGTGCAAATTTACATATGCAAGTTAAGAAATAGACAAACAGACAAGATGGGTCGATCAAAGACC AGTGAGAGAGCAAAATGGAATAAGAAGATTTGACACAAAACTGCACCATTATAAAATGGTGAAT AAGGTGAAACTTACCAAGAGGATATTTTCCCACCATAAAAGTCAATGAACTGGAATACTAGAGA TAAGCGAGCCTCAGTCGAGCTCAATGAGAACAAGTATTCGCATACATCTTCATATAATATCTCT GTCATAAATTGCTCATCCACTTCTTCATTAGGTTCCTCATAAAAATTAGTGACTGCAC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.506076267

Conservation Information
Conserved circRNAs	NA
PMCS	0.506076267

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							34265799-34269999(-)
34270001-34265774(-)
						
					

						Potential amino acid sequence
						
							MMFLQWCSQVQSLIFMRNLMKKWMSNL*(-)
MTEILYEDVCEYLFSLSSTEARLSLVFQFIDFYGGKISSWVCTNSSSWTEKILSLEELPDCIWQ
NMRRLQDELNKSQSMSGEFCFEFLFDGARGIPQRTEMMKFLRNAALLCLTAFPRNHILEEAALL
AEELFVTRMNSSSCSGAPCQSLAKRLLKRDRQDLLLCGIYARREAFYGNMDNARRVFDMALLSL
AGVSLDLQSNSSLPYLWYAEAELGNSNGSKSDSLSRAMHILSCLGSSATYGPFNSHPSSLQLLR
ARQGFKEKINSLRSKWVRGFIDDQSVALVCAAALFEDLAAGWAAGIEIIDDVFTMVLPGAVTNF
YEEPNEEVDEQFMTEILYEDVCEYLFSLSSTEARLSLVFQFIDFYGGKISSWVCTNSSSWTEKI
LSLEELPDCIWQNMRRLQDELNKSQSMSGEFCFEFLFDGARGIPQRTEMMKFLRNAALLCLTAF
PRNHILEEAALLAEELFVTRMNSSSCSGAPCQSLAKRLLKRDRQDLLLCGIYARREAFYGNMDN
ARRVFDMALLSLAGVSLDLQSNSSLPYLWYAEAELGNSNGSKSDSLSRAMHILSCLGSSATYGP
FNSHPSSLQLLRARQGFKEKINSLRSKWVRGFIDDQSVALVCAAALFEDLAAGWAAGIEIIDDV
FTMVLPGAVTNFYEEPNEEVDEQFMTEILYEDVCEYLFSLSSTEARLSLVFQFIDFYGGKISSW
VCTNSSSWTEKILSLEELPDCIWQNMRRLQDELNKSQSMSGEFCFEFLFDGARGIPQRTEMMKF
LRNAALLCLTAFPRNHILEEAALLAEELFVTRMNSSSCSGAPCQSLAKRLLKRDRQDLLLCGIY
ARREAFYGNMDNARRVFDMALLSLAGVSLDLQSNSSLPYLWYAEAELGNSNGSKSDSLSRAMHI
LSCLGSSATYGPFNSHPSSLQLLRARQGFKEKINSLRSKWVRGFIDDQSVALVCAAALFEDLAA
GWAAGIEIIDDVFTMVLPGAVTNFYEEPNEEVDEQFMTEILYEDVCEYLFSLSSTEARLSLVFQ
FIDFYGGKISSWVCTNSSSWTEKILSLEELPDCIWQNMRRLQDELNKSQSMSGEFCFEFLFDGA
RGIPQRTEMMKFLRNAALLCLTAFPRNHILEEAALLAEELFVTRMNSSSCSGAPCQSLAKRLLK
RDRQDLLLCGIYARREAFYGNMDNARRVFDMALLSLAGVSLDLQSNSSLPYLWYAEAELGNSNG
SKSDSLSRAMHILSCLGSSATYGPFNSHPSSLQLLRARQGFKEKINSLRSKWVRGFIDDQSVAL
VCAAALFEDLAAGWAAGIEIIDDVFTMVLP(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	34265799-34269999(-) 34270001-34265774(-)
Potential amino acid sequence	MMFLQWCSQVQSLIFMRNLMKKWMSNL*(-) MTEILYEDVCEYLFSLSSTEARLSLVFQFIDFYGGKISSWVCTNSSSWTEKILSLEELPDCIWQ NMRRLQDELNKSQSMSGEFCFEFLFDGARGIPQRTEMMKFLRNAALLCLTAFPRNHILEEAALL AEELFVTRMNSSSCSGAPCQSLAKRLLKRDRQDLLLCGIYARREAFYGNMDNARRVFDMALLSL AGVSLDLQSNSSLPYLWYAEAELGNSNGSKSDSLSRAMHILSCLGSSATYGPFNSHPSSLQLLR ARQGFKEKINSLRSKWVRGFIDDQSVALVCAAALFEDLAAGWAAGIEIIDDVFTMVLPGAVTNF YEEPNEEVDEQFMTEILYEDVCEYLFSLSSTEARLSLVFQFIDFYGGKISSWVCTNSSSWTEKI LSLEELPDCIWQNMRRLQDELNKSQSMSGEFCFEFLFDGARGIPQRTEMMKFLRNAALLCLTAF PRNHILEEAALLAEELFVTRMNSSSCSGAPCQSLAKRLLKRDRQDLLLCGIYARREAFYGNMDN ARRVFDMALLSLAGVSLDLQSNSSLPYLWYAEAELGNSNGSKSDSLSRAMHILSCLGSSATYGP FNSHPSSLQLLRARQGFKEKINSLRSKWVRGFIDDQSVALVCAAALFEDLAAGWAAGIEIIDDV FTMVLPGAVTNFYEEPNEEVDEQFMTEILYEDVCEYLFSLSSTEARLSLVFQFIDFYGGKISSW VCTNSSSWTEKILSLEELPDCIWQNMRRLQDELNKSQSMSGEFCFEFLFDGARGIPQRTEMMKF LRNAALLCLTAFPRNHILEEAALLAEELFVTRMNSSSCSGAPCQSLAKRLLKRDRQDLLLCGIY ARREAFYGNMDNARRVFDMALLSLAGVSLDLQSNSSLPYLWYAEAELGNSNGSKSDSLSRAMHI LSCLGSSATYGPFNSHPSSLQLLRARQGFKEKINSLRSKWVRGFIDDQSVALVCAAALFEDLAA GWAAGIEIIDDVFTMVLPGAVTNFYEEPNEEVDEQFMTEILYEDVCEYLFSLSSTEARLSLVFQ FIDFYGGKISSWVCTNSSSWTEKILSLEELPDCIWQNMRRLQDELNKSQSMSGEFCFEFLFDGA RGIPQRTEMMKFLRNAALLCLTAFPRNHILEEAALLAEELFVTRMNSSSCSGAPCQSLAKRLLK RDRQDLLLCGIYARREAFYGNMDNARRVFDMALLSLAGVSLDLQSNSSLPYLWYAEAELGNSNG SKSDSLSRAMHILSCLGSSATYGPFNSHPSSLQLLRARQGFKEKINSLRSKWVRGFIDDQSVAL VCAAALFEDLAAGWAAGIEIIDDVFTMVLP(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Zhao et al., 2017b

circRNA

Detail information of orai.005G134900_circ_g.1

Address

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