Splice junction sequence |
AGATGGGCAGCATTGTACAAGCTCAGCATGCTTCTTGTGCCGTTATTGTTATCATCGCGTGTGA AATTTCCTTCCTCGTCCCTGAACCTCTGGAACACATctcatgtgaagctatgtcattgagtaat cggccaacgatgcaggaagatgtgatgatcttggggtaggccatgccccagttgatagcatcat cggttgtg
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 393 Transcript exons: 2211156-2211264,2212466-2212547,2212563-2212651,2212737- 2212849 CTCATGTGAAGCTATGTCATTGAGTAATCGGCCAACGATGCAGGAAGATGTGATGATCTTGGGG TAGGCCATGCCCCAGTTGATAGCATCATCGGTTGTGACATCGTTTGAACATACATGGTGAGGAT ATTGAGCTCCTCGCAATACAGAGATTGCAAAATCCCAAAGTCGAGCTTGGCGAACTCCAAAATG GGCAACTTGTCGTAAACTGAGATGTAGTGCCTTGCTTCAACTCTTCTTGGCCTCCTGAAAAGAG GGGTCCTAAGTGCACTGCACACCTCCCATGAATCCTGAGATGGGCAGCATTGTACAAGCTCAGC ATGCTTCTTGTGCCGTTATTGTTATCATCGCGTGTGAAATTTCCTTCCTCGTCCCTGAACCTCT GGAACACAT
Transcript length: 670 Transcript exons: 2211156-2211226,2211234-2211334,2211822-2211922,2211949- 2212002,2212466-2212675,2212715-2212815,2212818-2212849 CTCATGTGAAGCTATGTCATTGAGTAATCGGCCAACGATGCAGGAAGATGTGATGATCTTGGGG TAGGCCAGTTGATAGCATCATCGGTTGTGACATCGTTTCCCATGGCGACGAAGGCGTAGACAGG GACGTGCATGCAGCAGCTGCTTGGCACTGAAATCTTGAGGTGCTTGCTGTAGTTGTCGTAGATG TCATCGAAAATCGAGACAAAGATGAACAATTTAGTGAGCATGGTTCTCCCATATGAGTACTGAG GCTCGAAGAGAACTCCACCTATCTCGCGCAAAGCTTAGATGATCCTGGAGTTGGAGCTCTTTCC ACCACCTGAACATACATGGTGAGGATATTGAGCTCCTCGCAATACAGAGATTGCAAAATCCCAA AGTCGAGCTTGGCGAACTCCAAAATGGTCTCATTTCGTGTGGGCAACTTGTCGTAAACTGAGAT GTAGTGCCTTGCTTCAACTCTTCTTGGCCTCCTGAAAAGAGGGGTCCTAAGTGCACTGCACACC TCGTCCGCCATTGGCGACTGCAGATTAGCATCGTCGAGTATCTCCTCCCCATGAATCCTGAGAT GGGCAGCATTGTACAAGCTCAGCATGCTTCTTGTGCCGTTATTGTTATCATCGCGTGTGAAATC CTTCCTCGTCCCTGAACCTCTGGAACACAT
Transcript length: 992 Transcript exons: 2211156-2211416,2211505-2211640,2211782-2212000,2212474- 2212849 CTCATGTGAAGCTATGTCATTGAGTAATCGGCCAACGATGCAGGAAGATGTGATGATCTTGGGG TAGGCCATGCCCCAGTTGATAGCATCATCGGTTGTGACATCGTTTCCCATGGCGACGAAGGCGT AGACAGGGACGTGCATGCAGCAGCTGCTTGGCACTGAAATCTTGAGGTGCTCCTCCACCGTAGC AGCTACCTGATCTGCACCTTCAGAGCGCCATTTCACCTCGTTGTAAAAGCATCTCGTAGCGTCG ATTAATAGGTTTTTGACATAGTCGACATGCTTGTTCCCTTGGAGTTTAAGATCAGTTTCTATGG ATTTCATGGTGGTCAGTACTTTCTTGTAGAAGAACTTCATGTAGCCTGGAAGTTCTTCAGCGGC TTCCTCATCCCATCTTTCAATTGCTTCTGTGAACAGCTTGCTTTCTTCCAAGGTGCTGTAGTTG TCGTAGATGTCATCGAAAATCGAGACAAAGATGAACAATTTAGTGAGCATGGTTCTCCCATATG AGTACTGAGGCTCGAAGAGAACTCCAAGCATCCAAAAGTGCATCTCCACCATCCTATCTCGCGC AAAGCTTAGATGATCCTGGAGTTGGAGCTCTTTCCACCACATGGTGAGGATATTGAGCTCCTCG CAATACAGAGATTGCAAAATCCCAAAGTCGAGCTTGGCGAACTCCAAAATGGTCTCATTTCGTG TGGGCAACTTGTCGTAAACTGAGATGTAGTGCCTTGCTTCAACTCTTCTTGGCCTCCTGAAAAG AGGGGTCCTAAGTGCACTGCACACCTCGTCCGCCATTGGCGACTGCAGATGTTTTACCACAGAC TGCAAATAGTTCCTAGTGAAGACGATAGCATCGTCGAGTATCTCCTCCCCATGAATCCTGAGAT GGGCAGCATTGTACAAGCTCAGCATGCTTCTTGTGCCGTTATTGTTATCATCGCGTGTGAAATT TCCTTCCTCGTCCCTGAACCTCTGGAACACAT
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Genomic sequence |
CTCATGTGAAGCTATGTCATTGAGTAATCGGCCAACGATGCAGGAAGATGTGATGATCTTGGGG TAGGCCATGCCCCAGTTGATAGCATCATCGGTTGTGACATCGTTTCCCATGGCGACGAAGGCGT AGACAGGGACGTGCATGCAGCAGCTGCTTGGCACTGAAATCTTGAGGTGCTCCTCCACCGTAGC AGCTACCTGATCTGCACCTTCAGAGCGCCATTTCACCTCGTTGTAAAAGCATCTCGTAGCGTCG ATTAACTGCAAGATTAACCAAGCAGTTAAAGTTGTGATCAATGAGATCAGCTGCCTGCCTGCCT GCAGGTAGTTGATGAGACTAGCTACTTACTAGGTTTTTGACATAGTCGACATGCTTGTTCCCTT GGAGTTTAAGATCAGTTTCTATGGATTTCATGGTGGTCAGTACTTTCTTGTAGAAGAACTTCAT GTAGCCTGGAAGTTCTTCAGCGGCTTCCTCATCCCATCTATTATATTTTTATGGTTCAATCATT GATAAAAATTAAATTCAAGTTAAAGACAAGAATTTTGGCTCCATGCAGCTTCTTTGAAACAAAT TAAGTTCGGAATGAATTTCATTATTAAAAGAAGAAACTTAATCAATTGACCTTTCAATTGCTTC TGTGAACAGCTTGCTTTCTTCCAAGGTGCTGTAGTTGTCGTAGATGTCATCGAAAATCGAGACA AAGATGAACAATTTAGTGAGCATGGTTCTCCCATATGAGTACTGAGGCTCGAAGAGAACTCCAA GCATCCAAAAGTGCATCTCCACCATCCTATCTCGCGCAAAGCTTAGATGATCCTGGAGTTGGAG CTCTTTCCACCACCTTCACCACACCGAAATAATAAATAAAAATTCACATTCTAGGTCCAGTTCT TGTATGTACATGCATTAAATTGGACATCTATATAGATATATAGGTGAATTTTGGTAACTCCCAA TACCTTGGCAAGGACAGTAAAATTGAGCCTATGCATGTTTTGAATTTTAGGGTTGGTTCAGGTA TTATAGCTAGCACGAAAAGATAATAAGGTATTCTCTTGTGGTGTAGATGAAGATGAAGATTAAG TGTTTTACGTAAAATAAGATGGTATTAATGTATAATTAATTGAGTTTTAATTATTATAAATTTT AAAAATAGATTTATCTGATATTTTAGAACAACTTCCATATAGAAAGTTTTCGCACGAAACATAT TGTTTAGTAGTTTGAAAAGCATGTCACCAAGATGATAATTTTCATCCAATTCCTATAGCAGAAA CGATAATTGGACCTAATCTAGTGATTTTTAGAACATACATGGTGAGGATATTGAGCTCCTCGCA ATACAGAGATTGCAAAATCCCAAAGTCGAGCTTGGCGAACTCCAAAATGGTCTCATTTCGTGTG GGCAACTTGTCGTAAACTGAGATGTAGTGCCTTGCTTCAACTCTTCTTGGCCTCCTGAAAAGAG GGGTCCTAAGTGCACTGCACACCTCGTCCGCCATTGGCGACTGCAGATGTTTTACCACAGACTG CAAATAGTTCCTAGTGAAGACGATAGCATCGTCGAGTATCTCCTCCCCATGAATCCTGAGATGG GCAGCATTGTACAAGCTCAGCATGCTTCTTGTGCCGTTATTGTTATCATCGCGTGTGAAATTTC CTTCCTCGTCCCTGAACCTCTGGAACACAT |