Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d021350_circ_g.1 |
ID in PlantcircBase | zma_circ_009405 |
Alias | zma_circ_0002591 |
Organism | Zea mays |
Position | chr7: 149687308-149688315 JBrowse» |
Reference genome | AGPv4.38 |
Type | ue-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d021350 |
Parent gene annotation |
Chaperone DnaJ-domain superfamily protein |
Parent gene strand | + |
Alternative splicing | NA |
Support reads | NA |
Tissues | leaf, root |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | Zm00001d021350_T006:3 Zm00001d021350_T003:3 Zm00001d021350_T001:2 Zm00001d021350_T002:2 Zm00001d021350_T004:3 Zm00001d021350_T005:3 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.159195081 |
Functional Information | |
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Coding potential | Y |
Potential coding position |
149688110-149688078(+) |
Potential amino acid sequence |
MLKAHTEHVHLDGIQIATMDHLRVGVMKMRKMLHLLGLHGLEDIVGSEIQATMVSVHTIFITGI SKAKEDLSFAQVMRMNQRICFVMFFETSTHIIGLFHLIIFRGTPNVLAHKNPETGVLKQTRRMK YQLHQRYLWHDKLLG*(+) |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ma et al., 2021b |