Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d037961_circ_g.1 |
ID in PlantcircBase | zma_circ_005262 |
Alias | tassel_test_circ_002136 |
Organism | Zea mays |
Position | chr6: 143611225-143611369 JBrowse» |
Reference genome | AGPv4.38 |
Type | ei-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d037961 |
Parent gene annotation |
NADP-dependent malic enzyme 3 |
Parent gene strand | + |
Alternative splicing | Zm00001d037961_circ_ag.1 Zm00001d037961_circ_ag.2 Zm00001d037961_circ_ag.2 Zm00001d037961_circ_ag.3 |
Support reads | NA |
Tissues | tassel |
Exon boundary | No-No |
Splicing signals | GT-GA |
Number of exons covered | Zm00001d037961_T008:1 Zm00001d037961_T016:1 Zm00001d037961_T012:1 Zm00001d037961_T013:1 Zm00001d037961_T006:1 Zm00001d037961_T005:1 Zm00001d037961_T015:1 Zm00001d037961_T003:1 Zm00001d037961_T004:1 Zm00001d037961_T014:1 Zm00001d037961_T001:1 Zm00001d037961_T002:1 Zm00001d037961_T010:1 Zm00001d037961_T011:1 Zm00001d037961_T009:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.120688966 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Tang et al., 2018 |