Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G08680_circ_g.3 |
ID in PlantcircBase | ath_circ_001441 |
Alias | Ath_circ_FC0258 |
Organism | Arabidpsis thaliana |
Position | chr1: 2765054-2767031 JBrowse» |
Reference genome | TAIR10.38 |
Type | ei-circRNA |
Identification method | PcircRNA_finder |
Parent gene | AT1G08680 |
Parent gene annotation |
ARF GAP-like zinc finger-containing protein ZIGA4 |
Parent gene strand | + |
Alternative splicing | AT1G08680_circ_g.1 AT1G08680_circ_g.2 AT1G08680_circ_g.4 |
Support reads | 40 |
Tissues | inflorescences |
Exon boundary | No-Yes |
Splicing signals | GT-AC |
Number of exons covered | AT1G08680.1:5 AT1G08680.2:5 AT1G08680.3:6 AT1G08680.5:5 AT1G08680.4:5 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.132470442 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017;Chen et al., 2017a |