Plant Circular RNA Database

Detail information of Zm00001d039189_circ_g.1

			
						 General Information
					
						CircRNA Name
						Zm00001d039189_circ_g.1
					
						ID in PlantcircBase
						zma_circ_009197
					
						Alias
						Zm06circ00108, zma_circ_0002336
					
						Organism
						
							Zea mays						
					
						Position
						
							chr6: 172206836-172209663  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						CIRI2, find_circ
					
						Parent gene
						
							Zm00001d039189						
					
						Parent gene annotation
						
							Structural maintenance of chromosomes protein 3
							
						Parent gene strand
						+
					
						Alternative splicing
						
							NA						
					
						Support reads
						NA
					
						Tissues
						leaf, endosperm, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d039189_T012:9
Zm00001d039189_T008:9
Zm00001d039189_T001:9
Zm00001d039189_T010:9
Zm00001d039189_T005:9
Zm00001d039189_T007:9
Zm00001d039189_T014:7
Zm00001d039189_T015:8
Zm00001d039189_T002:9
Zm00001d039189_T004:9

General Information
CircRNA Name	Zm00001d039189_circ_g.1
ID in PlantcircBase	zma_circ_009197
Alias	Zm06circ00108, zma_circ_0002336
Organism	Zea mays
Position	chr6: 172206836-172209663 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	CIRI2, find_circ
Parent gene	Zm00001d039189
Parent gene annotation	Structural maintenance of chromosomes protein 3
Parent gene strand	+
Alternative splicing	NA
Support reads	NA
Tissues	leaf, endosperm, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d039189_T012:9 Zm00001d039189_T008:9 Zm00001d039189_T001:9 Zm00001d039189_T010:9 Zm00001d039189_T005:9 Zm00001d039189_T007:9 Zm00001d039189_T014:7 Zm00001d039189_T015:8 Zm00001d039189_T002:9 Zm00001d039189_T004:9

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							ACACTGATTTTCGCTATCCAACGATGTGACCCAGCTCCATTTTATCTGTTCGACGAGATCGATG
CTGCTCTGGATCCACAATACCGAACAGCAGTTGGAAataagaaaattacagatttagttaccaa
acagcagcaaatggatgctgaacgtgatcatgcgaagtcagagttggaacaatttaaggctgac
attgccag

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1380
Transcript exons: 172206836-172206981,172207081-172207272,172207354-172207
537,172207618-172207688,172207763-172207914,172208349-17
2208517,172208629-172208775,172209252-172209395,17220948
9-172209663
ATAAGAAAATTACAGATTTAGTTACCAAACAGCAGCAAATGGATGCTGAACGTGATCATGCGAA
GTCAGAGTTGGAACAATTTAAGGCTGACATTGCCAGGGCTATGAAGCAAAGGGGGTCACTTGAG
AAAGCCCTTGTCAAGAAGGAAAAATCACTTAACAACATCTGCAACCAAATTGAGCAAGTCCAGT
CTAGCATTGCAATGAAGAATGATGAAATGGGCACAGAGCTTATTGATCAGCTAACTTCAGAAGA
AAGAGATCTCCTTTCACGATTGAATCCTGAAATTACTGATTTGAAGGAGAGATTTCTAATGTGT
AAAAACAGTCGGATTGAGATCGAAGCACGAAAGGAAGAATTGGAGACCAATTTATCAACAAATC
TTATCAGGCGTCAGAAAGAGCTAGAAGCGATAATTTCATCTGCAGATTCTAGAACCTTGCCTTT
GGAAGCTGAGGCAAAGGAGCAAGAACTGAAAAGTTCCAAGAGAAACCTTGATGAACTAACTTCA
TTATTAAAGGCTAATGTCGATGCCATAAATAATTTCACCAGAAAGATGGATGATCTGAAAAGAA
AAAGGGATGATCTGAAGGCTCGTGAAGCTATTTTAGAGCAGACTGTACAAGATGGTGCCAAAGA
CTTAGAACAGTTGATGAACAGCAGGAACACTTATCTAGCCAAGCAAGAAGAGTGCACGAAGAAG
ATCCGAGATTTGGGCTTGTTGCCTGCTGATGCTTTTGAAGCGTACAAGAGGAAAAACAAGAAAC
AGCTACATAAGATACTCTATGACTGTAATGAGCAGTTGAAGCAGTTTAGTCATGTGAACCAAAA
GGCTCTTGACCAATATGTGAACTTCACAGAACAACGCGAACAACTGCAGAGAAGGCGAGCTGAA
CTTGATGCCGGTGATGTGAAAATCATGGAACTCATATCGGTTTTAGACCAAAGGAAGGATGAAT
CCATTGAGCGCACATTTAAAGGGGTTGCAAGGCACTTCCGTGAAGTGTTTTCTGAGCTGGTGCA
AGGTGGTCATGGATATTTGGTTATGATGAAGAAAAAGGATGGGGATGCAGTTGATGATGATGAG
GAGGAGGATGGACCTCGTGATCCAGGCCCTGATGGGAGAATAGAAAAGTATATCGGTGTGAAAG
TCAAGGCAAGTCTCATTTGCAATGAGTGTTTATACTCCTGTTGGGTTGTTCTGGTATCATTTAC
TGGCAAGGGAGAAACTCAGTCTATGAAACAATTGTCAGGCGGACAGAAGACGGTGGTCGCACTA
ACACTGATTTTCGCTATCCAACGATGTGACCCAGCTCCATTTTATCTGTTCGACGAGATCGATG
CTGCTCTGGATCCACAATACCGAACAGCAGTTGGAA
						
					

						Genomic sequence
						
							ATAAGAAAATTACAGATTTAGTTACCAAACAGCAGCAAATGGATGCTGAACGTGATCATGCGAA
GTCAGAGTTGGAACAATTTAAGGCTGACATTGCCAGGGCTATGAAGCAAAGGGGGTCACTTGAG
AAAGCCCTTGTCAAGAAGGTACTTGTTTTTTGTTTTCTTGAATCCTTCATGGAGGATTATTGTT
ATTCCTGCTGCAATCATTTGTGCACTGTAAGCTGAATGTTTTCTAACTTGCAGGAAAAATCACT
TAACAACATCTGCAACCAAATTGAGCAAGTCCAGTCTAGCATTGCAATGAAGAATGATGAAATG
GGCACAGAGCTTATTGATCAGCTAACTTCAGAAGAAAGAGATCTCCTTTCACGATTGAATCCTG
AAATTACTGATTTGAAGGAGAGATTTCTAATGTGTAAAAACAGTCGGATTGAGGTTATTCAAGC
AAATTCAGTAGCAGTTGTTTTTCCCCATGCGATATTTATCTGCTCTAATGCAGTTCAAATTGTT
ATGTAGATCGAAGCACGAAAGGAAGAATTGGAGACCAATTTATCAACAAATCTTATCAGGCGTC
AGAAAGAGCTAGAAGCGATAATTTCATCTGCAGATTCTAGAACCTTGCCTTTGGAAGCTGAGGC
AAAGGAGCAAGAACTGAAAAGTTCCAAGAGAAACCTTGATGAACTAACTTCATTATTAAAGGGT
AAGTTACACTGATTGACTTTTCGTTCCCTTCCCTGTGTTAAATGACTTTAAGCTTAACTCAAAC
AATCCTTGGGACAGCTAATGTCGATGCCATAAATAATTTCACCAGAAAGATGGATGATCTGAAA
AGAAAAAGGGATGATCTGAAGGTAACTACTATTGCTACAGTTTTCTTTGTCGATTTCACTCTTG
TTGACTGGATTTATCCTTTTTTTAATTGCAGGCTCGTGAAGCTATTTTAGAGCAGACTGTACAA
GATGGTGCCAAAGACTTAGAACAGTTGATGAACAGCAGGAACACTTATCTAGCCAAGCAAGAAG
AGTGCACGAAGAAGATCCGAGATTTGGGCTTGTTGCCTGCTGATGCTTTTGAAGCGTACTGCAT
TCCTGTCCTTGCATCATGCTTTCCTTGTTTACAAGCATTAGATTTATCTTTCTAGATACTCCAT
CAGTCCAAGTATATAAGGTGTGCTTTGTCTTGGCATGGTCATCTAAACTAGACTTGAACATCAT
TTTGTTATAATATATTGTTCATAGCTACAGAAACTAATTAGTGTGAAAGCACTTTTGAGATACG
AGTCTAGTCGTATAATTTTCATACATTAAGCATTACCTATAAGTTGACTAACTTTTTGTTAGAA
TATCCAAAGTTTTTTTTCCCAAAAAATGCCACACCCTATACAACTGGATGGGAGTAGACATCTC
TGTGAATTAAAATTTGTGTAGTCTGTCAACAACTTCATTACCATGTAGGGTTTTTTGGGTGCTA
GAGTTCTGTGTTAGCTTATTTTGTATTTGACCGAAATATAGGTACAAGAGGAAAAACAAGAAAC
AGCTACATAAGATACTCTATGACTGTAATGAGCAGTTGAAGCAGTTTAGTCATGTGAACCAAAA
GGCTCTTGACCAATATGTGAACTTCACAGAACAACGCGAACAACTGCAGAGAAGGCGAGCTGAA
CTTGATGCCGGTGATGTGGTGAGCTGACATTAGTATAAATGTTTTTTATTTCAGTTAGCTCGAT
GCTCTTGTCTGAGTTCTGAACATTCTTAAAGCTAGAATCTGAAAGACTACTGGTCTGGGTTGCA
GAAAATCATGGAACTCATATCGGTTTTAGACCAAAGGAAGGATGAATCCATTGAGCGCACATTT
AAAGGGGTTGCAAGGCACTTCCGTGAAGTGTTTTCTGAGCTGGTGCAAGGTGGTCATGGATATT
TGGTTATGATGAAGAAAAAGGTTTCCTCACCCTTGGCTCCTGCTTTTACTCACTGGCCTTATTA
GCCTTGTTATCCTGTTTTTACACTTGATGACTGTGATTTCATTTTTGCCTGTCACCTATAGGCC
AATGTTCTGATTGTTCTGTTTTATTGCGGCTGTTCCTTTGATGCAATTATAAAAAGAGAGATCC
GACCTTGGAGGATCTAGGTGCTTTTTTCATCAAGAGAAATAGGGACCCAAATTCAAGCTGAGAG
GGGGCTTGAACATGGGTGGTTGAGTGCATGAGCACACGTCCCACCCAACTAGTTGCGAGGCTCA
CTTCCTGGTCCTTGGATGCAATGACAATCACACGTCTACTCTGTTTCTAATGATGTTTTAGTGC
TATTAATGAATTGCTTGGATTTCCCTTAATTTTTCTCCTTCACCTGCACATATGCTGTTTTAAG
AGTGAGTTTGATCTGACTTTCTAATATCCATGCTCTCCTTTCTGTTAGGATGGGGATGCAGTTG
ATGATGATGAGGAGGAGGATGGACCTCGTGATCCAGGCCCTGATGGGAGAATAGAAAAGTATAT
CGGTGTGAAAGTCAAGGCAAGTCTCATTTGCAATGAGTGTTTATACTCCTGTTGGGTTGTTCTG
GTGTTAAACAGTCTCATAATTCAAGATGGTGTTAAACAATTCTGAAGTTGTTATATATCCTGAC
ATTTATATTTAAGGGTGCTCGTGATTCAGGTATCATTTACTGGCAAGGGAGAAACTCAGTCTAT
GAAACAATTGTCAGGCGGACAGAAGACGGTGGTCGCACTAACACTGATTTTCGCTATCCAACGA
TGTGACCCAGCTCCATTTTATCTGTTCGACGAGATCGATGCTGCTCTGGATCCACAATACCGAA
CAGCAGTTGGAA
						
					

			
		

Sequences
Splice junction sequence	ACACTGATTTTCGCTATCCAACGATGTGACCCAGCTCCATTTTATCTGTTCGACGAGATCGATG CTGCTCTGGATCCACAATACCGAACAGCAGTTGGAAataagaaaattacagatttagttaccaa acagcagcaaatggatgctgaacgtgatcatgcgaagtcagagttggaacaatttaaggctgac attgccag
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1380 Transcript exons: 172206836-172206981,172207081-172207272,172207354-172207 537,172207618-172207688,172207763-172207914,172208349-17 2208517,172208629-172208775,172209252-172209395,17220948 9-172209663 ATAAGAAAATTACAGATTTAGTTACCAAACAGCAGCAAATGGATGCTGAACGTGATCATGCGAA GTCAGAGTTGGAACAATTTAAGGCTGACATTGCCAGGGCTATGAAGCAAAGGGGGTCACTTGAG AAAGCCCTTGTCAAGAAGGAAAAATCACTTAACAACATCTGCAACCAAATTGAGCAAGTCCAGT CTAGCATTGCAATGAAGAATGATGAAATGGGCACAGAGCTTATTGATCAGCTAACTTCAGAAGA AAGAGATCTCCTTTCACGATTGAATCCTGAAATTACTGATTTGAAGGAGAGATTTCTAATGTGT AAAAACAGTCGGATTGAGATCGAAGCACGAAAGGAAGAATTGGAGACCAATTTATCAACAAATC TTATCAGGCGTCAGAAAGAGCTAGAAGCGATAATTTCATCTGCAGATTCTAGAACCTTGCCTTT GGAAGCTGAGGCAAAGGAGCAAGAACTGAAAAGTTCCAAGAGAAACCTTGATGAACTAACTTCA TTATTAAAGGCTAATGTCGATGCCATAAATAATTTCACCAGAAAGATGGATGATCTGAAAAGAA AAAGGGATGATCTGAAGGCTCGTGAAGCTATTTTAGAGCAGACTGTACAAGATGGTGCCAAAGA CTTAGAACAGTTGATGAACAGCAGGAACACTTATCTAGCCAAGCAAGAAGAGTGCACGAAGAAG ATCCGAGATTTGGGCTTGTTGCCTGCTGATGCTTTTGAAGCGTACAAGAGGAAAAACAAGAAAC AGCTACATAAGATACTCTATGACTGTAATGAGCAGTTGAAGCAGTTTAGTCATGTGAACCAAAA GGCTCTTGACCAATATGTGAACTTCACAGAACAACGCGAACAACTGCAGAGAAGGCGAGCTGAA CTTGATGCCGGTGATGTGAAAATCATGGAACTCATATCGGTTTTAGACCAAAGGAAGGATGAAT CCATTGAGCGCACATTTAAAGGGGTTGCAAGGCACTTCCGTGAAGTGTTTTCTGAGCTGGTGCA AGGTGGTCATGGATATTTGGTTATGATGAAGAAAAAGGATGGGGATGCAGTTGATGATGATGAG GAGGAGGATGGACCTCGTGATCCAGGCCCTGATGGGAGAATAGAAAAGTATATCGGTGTGAAAG TCAAGGCAAGTCTCATTTGCAATGAGTGTTTATACTCCTGTTGGGTTGTTCTGGTATCATTTAC TGGCAAGGGAGAAACTCAGTCTATGAAACAATTGTCAGGCGGACAGAAGACGGTGGTCGCACTA ACACTGATTTTCGCTATCCAACGATGTGACCCAGCTCCATTTTATCTGTTCGACGAGATCGATG CTGCTCTGGATCCACAATACCGAACAGCAGTTGGAA
Genomic sequence	ATAAGAAAATTACAGATTTAGTTACCAAACAGCAGCAAATGGATGCTGAACGTGATCATGCGAA GTCAGAGTTGGAACAATTTAAGGCTGACATTGCCAGGGCTATGAAGCAAAGGGGGTCACTTGAG AAAGCCCTTGTCAAGAAGGTACTTGTTTTTTGTTTTCTTGAATCCTTCATGGAGGATTATTGTT ATTCCTGCTGCAATCATTTGTGCACTGTAAGCTGAATGTTTTCTAACTTGCAGGAAAAATCACT TAACAACATCTGCAACCAAATTGAGCAAGTCCAGTCTAGCATTGCAATGAAGAATGATGAAATG GGCACAGAGCTTATTGATCAGCTAACTTCAGAAGAAAGAGATCTCCTTTCACGATTGAATCCTG AAATTACTGATTTGAAGGAGAGATTTCTAATGTGTAAAAACAGTCGGATTGAGGTTATTCAAGC AAATTCAGTAGCAGTTGTTTTTCCCCATGCGATATTTATCTGCTCTAATGCAGTTCAAATTGTT ATGTAGATCGAAGCACGAAAGGAAGAATTGGAGACCAATTTATCAACAAATCTTATCAGGCGTC AGAAAGAGCTAGAAGCGATAATTTCATCTGCAGATTCTAGAACCTTGCCTTTGGAAGCTGAGGC AAAGGAGCAAGAACTGAAAAGTTCCAAGAGAAACCTTGATGAACTAACTTCATTATTAAAGGGT AAGTTACACTGATTGACTTTTCGTTCCCTTCCCTGTGTTAAATGACTTTAAGCTTAACTCAAAC AATCCTTGGGACAGCTAATGTCGATGCCATAAATAATTTCACCAGAAAGATGGATGATCTGAAA AGAAAAAGGGATGATCTGAAGGTAACTACTATTGCTACAGTTTTCTTTGTCGATTTCACTCTTG TTGACTGGATTTATCCTTTTTTTAATTGCAGGCTCGTGAAGCTATTTTAGAGCAGACTGTACAA GATGGTGCCAAAGACTTAGAACAGTTGATGAACAGCAGGAACACTTATCTAGCCAAGCAAGAAG AGTGCACGAAGAAGATCCGAGATTTGGGCTTGTTGCCTGCTGATGCTTTTGAAGCGTACTGCAT TCCTGTCCTTGCATCATGCTTTCCTTGTTTACAAGCATTAGATTTATCTTTCTAGATACTCCAT CAGTCCAAGTATATAAGGTGTGCTTTGTCTTGGCATGGTCATCTAAACTAGACTTGAACATCAT TTTGTTATAATATATTGTTCATAGCTACAGAAACTAATTAGTGTGAAAGCACTTTTGAGATACG AGTCTAGTCGTATAATTTTCATACATTAAGCATTACCTATAAGTTGACTAACTTTTTGTTAGAA TATCCAAAGTTTTTTTTCCCAAAAAATGCCACACCCTATACAACTGGATGGGAGTAGACATCTC TGTGAATTAAAATTTGTGTAGTCTGTCAACAACTTCATTACCATGTAGGGTTTTTTGGGTGCTA GAGTTCTGTGTTAGCTTATTTTGTATTTGACCGAAATATAGGTACAAGAGGAAAAACAAGAAAC AGCTACATAAGATACTCTATGACTGTAATGAGCAGTTGAAGCAGTTTAGTCATGTGAACCAAAA GGCTCTTGACCAATATGTGAACTTCACAGAACAACGCGAACAACTGCAGAGAAGGCGAGCTGAA CTTGATGCCGGTGATGTGGTGAGCTGACATTAGTATAAATGTTTTTTATTTCAGTTAGCTCGAT GCTCTTGTCTGAGTTCTGAACATTCTTAAAGCTAGAATCTGAAAGACTACTGGTCTGGGTTGCA GAAAATCATGGAACTCATATCGGTTTTAGACCAAAGGAAGGATGAATCCATTGAGCGCACATTT AAAGGGGTTGCAAGGCACTTCCGTGAAGTGTTTTCTGAGCTGGTGCAAGGTGGTCATGGATATT TGGTTATGATGAAGAAAAAGGTTTCCTCACCCTTGGCTCCTGCTTTTACTCACTGGCCTTATTA GCCTTGTTATCCTGTTTTTACACTTGATGACTGTGATTTCATTTTTGCCTGTCACCTATAGGCC AATGTTCTGATTGTTCTGTTTTATTGCGGCTGTTCCTTTGATGCAATTATAAAAAGAGAGATCC GACCTTGGAGGATCTAGGTGCTTTTTTCATCAAGAGAAATAGGGACCCAAATTCAAGCTGAGAG GGGGCTTGAACATGGGTGGTTGAGTGCATGAGCACACGTCCCACCCAACTAGTTGCGAGGCTCA CTTCCTGGTCCTTGGATGCAATGACAATCACACGTCTACTCTGTTTCTAATGATGTTTTAGTGC TATTAATGAATTGCTTGGATTTCCCTTAATTTTTCTCCTTCACCTGCACATATGCTGTTTTAAG AGTGAGTTTGATCTGACTTTCTAATATCCATGCTCTCCTTTCTGTTAGGATGGGGATGCAGTTG ATGATGATGAGGAGGAGGATGGACCTCGTGATCCAGGCCCTGATGGGAGAATAGAAAAGTATAT CGGTGTGAAAGTCAAGGCAAGTCTCATTTGCAATGAGTGTTTATACTCCTGTTGGGTTGTTCTG GTGTTAAACAGTCTCATAATTCAAGATGGTGTTAAACAATTCTGAAGTTGTTATATATCCTGAC ATTTATATTTAAGGGTGCTCGTGATTCAGGTATCATTTACTGGCAAGGGAGAAACTCAGTCTAT GAAACAATTGTCAGGCGGACAGAAGACGGTGGTCGCACTAACACTGATTTTCGCTATCCAACGA TGTGACCCAGCTCCATTTTATCTGTTCGACGAGATCGATGCTGCTCTGGATCCACAATACCGAA CAGCAGTTGGAA

			
						 Conservation Information
					
						Conserved circRNAs
						
							osa_circ_013009 osi_circ_003636 osa_circ_013010 osi_circ_011776 
						
						PMCS
						0.184010096

Conservation Information
Conserved circRNAs	osa_circ_013009 osi_circ_003636 osa_circ_013010 osi_circ_011776
PMCS	0.184010096

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							172206875-172209660(+)
						
					

						Potential amino acid sequence
						
							MDAERDHAKSELEQFKADIARAMKQRGSLEKALVKKEKSLNNICNQIEQVQSSIAMKNDEMGTE
LIDQLTSEERDLLSRLNPEITDLKERFLMCKNSRIEIEARKEELETNLSTNLIRRQKELEAIIS
SADSRTLPLEAEAKEQELKSSKRNLDELTSLLKANVDAINNFTRKMDDLKRKRDDLKAREAILE
QTVQDGAKDLEQLMNSRNTYLAKQEECTKKIRDLGLLPADAFEAYKRKNKKQLHKILYDCNEQL
KQFSHVNQKALDQYVNFTEQREQLQRRRAELDAGDVKIMELISVLDQRKDESIERTFKGVARHF
REVFSELVQGGHGYLVMMKKKDGDAVDDDEEEDGPRDPGPDGRIEKYIGVKVKASLICNECLYS
CWVVLVSFTGKGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAVGN
KKITDLVTKQQQMDAERDHAKSELEQFKADIARAMKQRGSLEKALVKKEKSLNNICNQIEQVQS
SIAMKNDEMGTELIDQLTSEERDLLSRLNPEITDLKERFLMCKNSRIEIEARKEELETNLSTNL
IRRQKELEAIISSADSRTLPLEAEAKEQELKSSKRNLDELTSLLKANVDAINNFTRKMDDLKRK
RDDLKAREAILEQTVQDGAKDLEQLMNSRNTYLAKQEECTKKIRDLGLLPADAFEAYKRKNKKQ
LHKILYDCNEQLKQFSHVNQKALDQYVNFTEQREQLQRRRAELDAGDVKIMELISVLDQRKDES
IERTFKGVARHFREVFSELVQGGHGYLVMMKKKDGDAVDDDEEEDGPRDPGPDGRIEKYIGVKV
KASLICNECLYSCWVVLVSFTGKGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDA
ALDPQYRTAVGNKKITDLVTKQQQMDAERDHAKSELEQFKADIARAMKQRGSLEKALVKKEKSL
NNICNQIEQVQSSIAMKNDEMGTELIDQLTSEERDLLSRLNPEITDLKERFLMCKNSRIEIEAR
KEELETNLSTNLIRRQKELEAIISSADSRTLPLEAEAKEQELKSSKRNLDELTSLLKANVDAIN
NFTRKMDDLKRKRDDLKAREAILEQTVQDGAKDLEQLMNSRNTYLAKQEECTKKIRDLGLLPAD
AFEAYKRKNKKQLHKILYDCNEQLKQFSHVNQKALDQYVNFTEQREQLQRRRAELDAGDVKIME
LISVLDQRKDESIERTFKGVARHFREVFSELVQGGHGYLVMMKKKDGDAVDDDEEEDGPRDPGP
DGRIEKYIGVKVKASLICNECLYSCWVVLVSFTGKGETQSMKQLSGGQKTVVALTLIFAIQRCD
PAPFYLFDEIDAALDPQYRTAVGNKKITDLVTKQQQMDAERDHAKSELEQFKADIARAMKQRGS
LEKALVKKEKSLNNICNQIEQVQSSIAMKNDEMGTELIDQLTSEERDLLSRLNPEITDLKERFL
MCKNSRIEIEARKEELETNLSTNLIRRQKELEAIISSADSRTLPLEAEAKEQELKSSKRNLDEL
TSLLKANVDAINNFTRKMDDLKRKRDDLKAREAILEQTVQDGAKDLEQLMNSRNTYLAKQEECT
KKIRDLGLLPADAFEAYKRKNKKQLHKILYDCNEQLKQFSHVNQKALDQYVNFTEQREQLQRRR
AELDAGDVKIMELISVLDQRKDESIERTFKGVARHFREVFSELVQGGHGYLVMMKKKDGDAVDD
DEEEDGPRDPGPDGRIEKYIGVKVKASLICNECLYSCWVVLVSFTGKGETQSMKQLSGGQKTVV
ALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAVG(+)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	172206875-172209660(+)
Potential amino acid sequence	MDAERDHAKSELEQFKADIARAMKQRGSLEKALVKKEKSLNNICNQIEQVQSSIAMKNDEMGTE LIDQLTSEERDLLSRLNPEITDLKERFLMCKNSRIEIEARKEELETNLSTNLIRRQKELEAIIS SADSRTLPLEAEAKEQELKSSKRNLDELTSLLKANVDAINNFTRKMDDLKRKRDDLKAREAILE QTVQDGAKDLEQLMNSRNTYLAKQEECTKKIRDLGLLPADAFEAYKRKNKKQLHKILYDCNEQL KQFSHVNQKALDQYVNFTEQREQLQRRRAELDAGDVKIMELISVLDQRKDESIERTFKGVARHF REVFSELVQGGHGYLVMMKKKDGDAVDDDEEEDGPRDPGPDGRIEKYIGVKVKASLICNECLYS CWVVLVSFTGKGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAVGN KKITDLVTKQQQMDAERDHAKSELEQFKADIARAMKQRGSLEKALVKKEKSLNNICNQIEQVQS SIAMKNDEMGTELIDQLTSEERDLLSRLNPEITDLKERFLMCKNSRIEIEARKEELETNLSTNL IRRQKELEAIISSADSRTLPLEAEAKEQELKSSKRNLDELTSLLKANVDAINNFTRKMDDLKRK RDDLKAREAILEQTVQDGAKDLEQLMNSRNTYLAKQEECTKKIRDLGLLPADAFEAYKRKNKKQ LHKILYDCNEQLKQFSHVNQKALDQYVNFTEQREQLQRRRAELDAGDVKIMELISVLDQRKDES IERTFKGVARHFREVFSELVQGGHGYLVMMKKKDGDAVDDDEEEDGPRDPGPDGRIEKYIGVKV KASLICNECLYSCWVVLVSFTGKGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDA ALDPQYRTAVGNKKITDLVTKQQQMDAERDHAKSELEQFKADIARAMKQRGSLEKALVKKEKSL NNICNQIEQVQSSIAMKNDEMGTELIDQLTSEERDLLSRLNPEITDLKERFLMCKNSRIEIEAR KEELETNLSTNLIRRQKELEAIISSADSRTLPLEAEAKEQELKSSKRNLDELTSLLKANVDAIN NFTRKMDDLKRKRDDLKAREAILEQTVQDGAKDLEQLMNSRNTYLAKQEECTKKIRDLGLLPAD AFEAYKRKNKKQLHKILYDCNEQLKQFSHVNQKALDQYVNFTEQREQLQRRRAELDAGDVKIME LISVLDQRKDESIERTFKGVARHFREVFSELVQGGHGYLVMMKKKDGDAVDDDEEEDGPRDPGP DGRIEKYIGVKVKASLICNECLYSCWVVLVSFTGKGETQSMKQLSGGQKTVVALTLIFAIQRCD PAPFYLFDEIDAALDPQYRTAVGNKKITDLVTKQQQMDAERDHAKSELEQFKADIARAMKQRGS LEKALVKKEKSLNNICNQIEQVQSSIAMKNDEMGTELIDQLTSEERDLLSRLNPEITDLKERFL MCKNSRIEIEARKEELETNLSTNLIRRQKELEAIISSADSRTLPLEAEAKEQELKSSKRNLDEL TSLLKANVDAINNFTRKMDDLKRKRDDLKAREAILEQTVQDGAKDLEQLMNSRNTYLAKQEECT KKIRDLGLLPADAFEAYKRKNKKQLHKILYDCNEQLKQFSHVNQKALDQYVNFTEQREQLQRRR AELDAGDVKIMELISVLDQRKDESIERTFKGVARHFREVFSELVQGGHGYLVMMKKKDGDAVDD DEEEDGPRDPGPDGRIEKYIGVKVKASLICNECLYSCWVVLVSFTGKGETQSMKQLSGGQKTVV ALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAVG(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Han et al., 2020; Ma et al., 2021b

circRNA

Detail information of Zm00001d039189_circ_g.1

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