| CircRNA Name |
AT1G44170_circ_g.10 |
| ID in PlantcircBase |
ath_circ_005996 |
| Alias |
At_ciR1361, Ath_circ_FC0656, Ath_circ_FC0657, AT1G44170_C1 |
| Organism |
Arabidpsis thaliana |
| Position |
chr1: 16797905-16798293 JBrowse» |
| Reference genome |
TAIR10.38 |
| Type |
e-circRNA
|
| Identification method |
CIRCexplorer, find_circ, CIRI2 |
| Parent gene |
AT1G44170 |
| Parent gene annotation |
Aldehyde dehydrogenase family 3 member H1
|
| Parent gene strand |
- |
| Alternative splicing |
AT1G44170_circ_g.2 AT1G44170_circ_g.3 AT1G44170_circ_g.4 AT1G44170_circ_g.5 AT1G44170_circ_g.6 AT1G44170_circ_g.7 AT1G44170_circ_g.8 AT1G44170_circ_g.9 |
| Support reads |
3/1/5 |
| Tissues |
leaf/root/seedlings |
| Exon boundary |
Yes-Yes
"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
|
| Splicing signals |
CT-AC
The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
|
| Number of exons covered |
AT1G44170.2:2
AT1G44170.1:2
AT1G44170.3:2
|
