Splice junction sequence |
CTCTTCCCCGATGCCATCGGCCACCACATCCAAGGTGTCACTGTCCACGACGGTGAATGGGACT CTCATGAAGCCATCAAGATTTGGAACTATACATGCGatgggaaaccggaggtgttcaaggagag gagagagatagacgatgagaatatggcggtaacgttcagaggactcgaaggtcacgtgatggag cagcttaa
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 505 Transcript exons: 236613-236829,239714-240001 ATGGGAAACCGGAGGTGTTCAAGGAGAGGAGAGAGATAGACGATGAGAATATGGCGGTAACGTT CAGAGGACTCGAAGGTCACGTGATGGAGCAGCTTAAAGTGTATGACGTCATCTTTCAGTTCATT CAAAAGTCACCTGATGATATCATCTGTAAGATCACTATGATCTGGGAGAAGCAAAACGATGACA TGCCTGAGCCCAGCAACTACATGAACACACTCTATATATAAACGAAGGAAGATCACACGTGAAA ATAGTCATCAACCAAAGTAAGAAGCGCACACACACAACATATTTCTTTCACTACCCAAAGAGAT GGCGACATCGGGAACATATGTGACGGAGGTTCCATTGAAAGGATCGGCGGATAAACACTACAAG CGGTGGAGAGATGAGAACCACCTCTTCCCCGATGCCATCGGCCACCACATCCAAGGTGTCACTG TCCACGACGGTGAATGGGACTCTCATGAAGCCATCAAGATTTGGAACTATACATGCG
Transcript length: 540 Transcript exons: 236613-236839,239689-240001 ATGGGAAACCGGAGGTGTTCAAGGAGAGGAGAGAGATAGACGATGAGAATATGGCGGTAACGTT CAGAGGACTCGAAGGTCACGTGATGGAGCAGCTTAAAGTGTATGACGTCATCTTTCAGTTCATT CAAAAGTCACCTGATGATATCATCTGTAAGATCACTATGATCTGGGAGAAGCAAAACGATGACA TGCCTGAGCCCAGCAACTACATGAAGTTCGTCAAGCATCTATTTTACGTCTAAACCGTTACACA CTCTATATATAAACGAAGGAAGATCACACGTGAAAATAGTCATCAACCAAAGTAAGAAGCGCAC ACACACAACATATTTCTTTCACTACCCAAAGAGATGGCGACATCGGGAACATATGTGACGGAGG TTCCATTGAAAGGATCGGCGGATAAACACTACAAGCGGTGGAGAGATGAGAACCACCTCTTCCC CGATGCCATCGGCCACCACATCCAAGGTGTCACTGTCCACGACGGTGAATGGGACTCTCATGAA GCCATCAAGATTTGGAACTATACATGCG
Transcript length: 549 Transcript exons: 236613-236849,239690-240001 ATGGGAAACCGGAGGTGTTCAAGGAGAGGAGAGAGATAGACGATGAGAATATGGCGGTAACGTT CAGAGGACTCGAAGGTCACGTGATGGAGCAGCTTAAAGTGTATGACGTCATCTTTCAGTTCATT CAAAAGTCACCTGATGATATCATCTGTAAGATCACTATGATCTGGGAGAAGCAAAACGATGACA TGCCTGAGCCCAGCAACTACATGAAGTTCGTCAAGAGCCTCGCTGATCTATTTTACGTCTAAAC CGTTACACACTCTATATATAAACGAAGGAAGATCACACGTGAAAATAGTCATCAACCAAAGTAA GAAGCGCACACACACAACATATTTCTTTCACTACCCAAAGAGATGGCGACATCGGGAACATATG TGACGGAGGTTCCATTGAAAGGATCGGCGGATAAACACTACAAGCGGTGGAGAGATGAGAACCA CCTCTTCCCCGATGCCATCGGCCACCACATCCAAGGTGTCACTGTCCACGACGGTGAATGGGAC TCTCATGAAGCCATCAAGATTTGGAACTATACATGCG
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Genomic sequence |
ATGGGAAACCGGAGGTGTTCAAGGAGAGGAGAGAGATAGACGATGAGAATATGGCGGTAACGTT CAGAGGACTCGAAGGTCACGTGATGGAGCAGCTTAAAGTGTATGACGTCATCTTTCAGTTCATT CAAAAGTCACCTGATGATATCATCTGTAAGATCACTATGATCTGGGAGAAGCAAAACGATGACA TGCCTGAGCCCAGCAACTACATGAAGTTCGTCAAGAGCCTCGCTGCTGACATGGATGATCACGT TCTCAAAGCCTAAATATCCCTTTCACATCAACCCATCATCACCTAATATCATGATCATCATCAC CCTCATACGTACATTGCTCCTTTTGTGTGTGTGTGTGTGTATCGTTTTTATGGTGTTTTCAATA TAATAAATGGGGGTTTACATGTATGGTTTCATCTACTATAATATGCTTTGATGTTGTTTATTAT GGTTGAGGTTTCATGTATGCTCATCTACGCATGTATCCTTGTTAATTAATGATTTTCAAGAGTT ATCAATCAATACTGCCCTTTTTTAAAGTGTTGCACTACGTATGTATCAGCTTCCACAAGCTCAC ATTGTATACAGCATTTGTGGTTGTATTATTCATCATTTTGTACGTTCAATTATGGTTATTATTC ATACACAGTATTCATTATATTTATAGTGGTTGTATAGTATATTTAGTTGCTGTTGCTGTCTTTG TATGTTCATTTAGTGTATAGTAATTAATGCTGACTTTATAAGTTCATATAGTGGTTGTAACATT TATCATTTCTATGAGTATATATTATTACTCATGTCCTCCGAAATTGGACAACATTTAAACGATA CAAGCAAGGAAGACAATAAAAATACAAAAATATTTCCTTCGAAACTCTAGTAAAGAAAGCATAT AATGAAACCAGCATTTAGCAAAGATGAGGGGTCTATGTGGGATGGGGGTCTTGTTGGTTCAATG ATGTAAAAAATCATTACGATTTGTTTTAAGGCTATTGTTTTTAATGGGTTGATATATGAATGAC GAGGACAATGGTCATGTATATGGATTTTGTCAAACCTACTAATTAGAATTGTGTTGTATGATAA GAACTTGGAAAACGTGAATTATGTATGGTATACAGCACAATCGCAAGTATCAGTAAATATCTAT TAATCTAACATATAAATTTTGAGTTTATATGATTCTATATATCTTTGTAAATAAATAATGTTTA TGCTGTGCTTGACAAAAAAAATGATTATGTGTACGTACGTATGCTAAGAGATGATCAAAATTAT AACTAGAGACATTATTAGAGCAAAGTACCAGATAAGACTTTTAAAGATATTTGGAATATTATAT GAAATATGAAAGTATCAGTTTAATAAATACTAAATGTAGAAAAATTACAATCGTGACAGTTAGC TTAACTCAAACTTTATACTAAAAACTATCTATACTATTAATTGGGAATCATCGGAAAATTTACA ACCTTTTGAAACCCGCACGTATGTGCGGGTCAGGATCTAGTGATTCTTTAAATTTGGAAACTCG AATATCTCAAACGATATTAATTATTCAGGATATTGATATTACATGGATGGATCATGGAAATAAA GCGACAAATTGTTTGGAGCAGAATGGTACTATACATCATCAAATGGAGAGACGTCAACCATGAG AACTGCAAATCTTTAAGAAGTCTATCCTCACTACATGCAGAAGTGGAAGCGCTTCTCTGATGAT GAGGTGTATGATTGGCGCTAACAATCAAGACGTAGCTTTTCTAATAGACTATTCAGATCAGGTG AAGATGGTGTCTTTCCTAACCGAATGACCAGCCTTCTCAGTGTATTTGGAGGATTTGAAAAACG ACAATGAAGAATTTAAAAGTTTTCTTTTATCTTTAAATTTTAGTACAAATGTTAAAGCGGATAA TTTGGCACGAAAAGTTCTATACCAAATCACATCATATCACATATGCAAACAACATTCTTCGGGA ATGGATCTTTAATTTGAGTTCTAACTAATATCGGTTGACAAAAGAAAAAAGTTTAGAAATAATA TTATCTCATTTAAACTAGATACATAAATGAAACAACAACACACCCATACACACAAAAAGCGACT CTATTTTGTTAAATAGATGAAGAGCCTCCTCTAGAAGATGAAGTGATATCTCTAGAACCAGCAC TTTCAACCTAGCCACATAGTGATGGATTGATTAAGGACAACACCTCAGAAAAAGACTTGTCTAT GCCATGTATACTTTCGCTAAGAAGTAAGAAGGGAGTGATTTGGCGCCAGGTAATTGCAATGTTT GAAGCGGTCTTTTTGGGGGTCTAGCTACTTCATCCTTCCAACTGTAGCTATCTTGAGTCTCAGG GAAGATCATAACCATTGTGAGCTTGTAGAAAAAGGCTTCTACATTGTCACTGTGGGCACTCGTG AACTGCCAGCCAATTTTAGAGGTCTATATAGAATCTTTTTTATCAAGAAAATGTGTATAACATA TAAGAGCACCCTCAATAGTGTATCTTAGCAAAATCTTAGGATTAAAAGCAATTAAAATAAAGCA AACCAACAATCCAAAGCTAAGAAGTGTATTTTTCTTTAGATGTTTTTCTTAAGTTAAGATGTTT TTCTTAAGTTAAGATGTTTATATGTGTTATTTGATGATTGGTTTAAAAAATGAACAAAAATAGA AGATATTGTTTTAGAAAAAATGAACAAAATAGAAGATATTGTTTTAAAAATATCAATGAAAGTC ACAGCTGGCAGGAAATCTACGGTATCGTTATCTGGTGGACTTTTCGGCATTCAAGGAACAATAC ATCATATCAACAAACAATAATTATGGTTTGTTTAAGGTTTAAATTAAAATTGATGTATGCATTT GTCTACTCTAATCCTTATCATTGATTCATTATATGCTTCTTTTTTTGTTGGTAAAACCATTATA TGCATTTTGTCAAACCTATCCTTATCTTAATAACAAACAAAATACATTGTATGATAAGAACTTG GACAACGTGAAATATGACTCATTCTAAATATATTAGCAGTAGATATCAAATAAGTATAAAACCC GGCTCATCTATTTTACGTCTAAACCGTTACACACTCTATATATAAACGAAGGAAGATCACACGT GAAAATAGTCATCAACCAAAGTAAGAAGCGCACACACACAACATATTTCTTTCACTACCCAAAG AGATGGCGACATCGGGAACATATGTGACGGAGGTTCCATTGAAAGGATCGGCGGATAAACACTA CAAGCGGTGGAGAGATGAGAACCACCTCTTCCCCGATGCCATCGGCCACCACATCCAAGGTGTC ACTGTCCACGACGGTGAATGGGACTCTCATGAAGCCATCAAGATTTGGAACTATACATGCG |