circRNA
Detailed infomation of each circRNA
Detail information of Chr2_circ_ig.56
| General Information | |
|---|---|
| CircRNA Name | Chr2_circ_ig.56 |
| ID in PlantcircBase | csa_circ_001237 |
| Alias | Chr2:20236362_20241360 |
| Organism | Cucumis sativus |
| Position | chrChr2: 20236362-20241360 JBrowse» |
| Reference genome | Cucumis sativus v1.5 |
| Type | ig-circRNA |
| Identification method | CIRI2;Find_circ |
| Parent gene | NA |
| Parent gene annotation | NA |
| Parent gene strand | NA |
| Alternative splicing | Chr2_circ_ig.55 Chr2_circ_ig.57 Chr2_circ_ig.58 |
| Support reads | NA |
| Tissues | leaf,root |
| Exon boundary | NA-NA |
| Splicing signals | CT-AC |
| Number of exons covered | NA |
| Conservation Information | |
|---|---|
| Conserved circRNAs | NA |
| PMCS | 0.417061531 |
| Functional Information | |
|---|---|
| Coding potential | N |
| Potential coding position |
NA |
| Potential amino acid sequence |
NA |
| Sponge-miRNAs | NA |
| circRNA-miRNA-mRNA network | VISUALIZATION |
| Potential function description | responsive to salt stress in root |
| Other Information | |
|---|---|
| References | Zhu et al., 2019;He et al., 2020 |
