Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | Zm00001d015138_circ_g.14 |
ID in PlantcircBase | zma_circ_008556 |
Alias | zma_circ_0002189 |
Organism | Zea mays |
Position | chr5: 76843868-76847503 JBrowse» |
Reference genome | AGPv4.38 |
Type | ue-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d015138 |
Parent gene annotation |
protein_coding |
Parent gene strand | - |
Alternative splicing | Zm00001d015138_circ_g.6 Zm00001d015138_circ_g.7 Zm00001d015138_circ_g.8 Zm00001d015138_circ_g.9 Zm00001d015138_circ_g.10 Zm00001d015138_circ_g.11 Zm00001d015138_circ_g.12 Zm00001d015138_circ_g.13 Zm00001d015138_circ_g.15 Zm00001d015138_circ_g.16 Zm00001d015138_circ_g.17 Zm00001d015138_circ_g.18 Zm00001d015138_circ_g.19 Zm00001d015138_circ_g.20 Zm00001d015138_circ_g.21 Zm00001d015138_circ_g.22 Zm00001d015138_circ_g.23 Zm00001d015138_circ_g.24 Zm00001d015138_circ_g.25 Zm00001d015138_circ_g.26 Zm00001d015138_circ_g.27 Zm00001d015138_circ_g.28 Zm00001d015138_circ_g.29 Zm00001d015138_circ_g.30 |
Support reads | NA |
Tissues | leaf, root |
Exon boundary | No-No |
Splicing signals | CT-AC |
Number of exons covered | Zm00001d015138_T002:6 Zm00001d015138_T006:1 Zm00001d015138_T001:5 Zm00001d015138_T004:6 Zm00001d015138_T005:2 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.013114244 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Ma et al., 2021b |