Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G07890_circ_g.20 |
ID in PlantcircBase | ath_circ_001223 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr1: 2439554-2439648 JBrowse» |
Reference genome | TAIR10.38 |
Type | u-circRNA |
Identification method | circRNA_finder |
Parent gene | AT1G07890 |
Parent gene annotation |
MEE6 |
Parent gene strand | + |
Alternative splicing | AT1G07890_circ_g.19 |
Support reads | 4 |
Tissues | root, aerial |
Exon boundary | No-No |
Splicing signals | CT-AC |
Number of exons covered | AT1G07890.7:1 AT1G07890.6:1 AT1G07890.1:1 AT1G07890.2:1 AT1G07890.8:1 AT1G07890.5:1 AT1G07890.3:1 AT1G07890.4:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.193859645 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |