Plant Circular RNA Database

Detail information of Zm00001d006459_circ_g.3

			
						 General Information
					
						CircRNA Name
						Zm00001d006459_circ_g.3
					
						ID in PlantcircBase
						zma_circ_007365
					
						Alias
						zma_circ_0000908
					
						Organism
						
							Zea mays						
					
						Position
						
							chr2: 208865659-208869971  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							Zm00001d006459						
					
						Parent gene annotation
						
							Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Zm00001d006459_circ_g.1 Zm00001d006459_circ_g.2 						
					
						Support reads
						NA
					
						Tissues
						leaf, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d006459_T013:8
Zm00001d006459_T002:4
Zm00001d006459_T012:8
Zm00001d006459_T008:8
Zm00001d006459_T004:8
Zm00001d006459_T017:8
Zm00001d006459_T003:8
Zm00001d006459_T006:8
Zm00001d006459_T019:8
Zm00001d006459_T009:9
Zm00001d006459_T016:8

General Information
CircRNA Name	Zm00001d006459_circ_g.3
ID in PlantcircBase	zma_circ_007365
Alias	zma_circ_0000908
Organism	Zea mays
Position	chr2: 208865659-208869971 JBrowse»
Reference genome	AGPv4.38
Type	ue-circRNA
Identification method	find_circ
Parent gene	Zm00001d006459
Parent gene annotation	Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7
Parent gene strand	-
Alternative splicing	Zm00001d006459_circ_g.1 Zm00001d006459_circ_g.2
Support reads	NA
Tissues	leaf, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d006459_T013:8 Zm00001d006459_T002:4 Zm00001d006459_T012:8 Zm00001d006459_T008:8 Zm00001d006459_T004:8 Zm00001d006459_T017:8 Zm00001d006459_T003:8 Zm00001d006459_T006:8 Zm00001d006459_T019:8 Zm00001d006459_T009:9 Zm00001d006459_T016:8

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GATCACCATGTTTATCATGGGATCCTCTATCATCATAGTAACCATAACCACGAGGAGTGCCATG
AGGACGAGAACCTTGAGAGCTTCTAGAGATGTGGGCctgtagcagatcatcccggacggtaaat
atgggaagatattgcctttgttgagaaagggattttgattttgcaaaatcactgacagcttctg
ctttatcc

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CTGTAGCAGATCATCCCGGACGGTAAATATGGGAAGATATTGCCTTTGTTGAGAAAGGGATTTT
GATTTTGCAAAATCACTGACAGCTTCTGCTTTATCCTTCAAATGTTGTGAAAACTTTGCTTCTT
CTTTAAAATTAATCTCACCTTGGTCACCAACAACAGCAGTATCTGCATCAACCTGATTTTTCAA
AGGTGAGTAGGAAACAATGACAAGGAACTGTCTTTCTCAAAACAGATAAATACAAGGGGACAAA
AATACCTGTTCAGCTGTTTTCTCAACACCCAAGATATTGCCAAGCTTAGATCCAGCAAGCTCCC
AAAATCGTTGCCTTGATTTGTTCATGCTTTGCTTTTCACGGATTTCCCTAACCAGACTAGAACC
TTTGCGTGCAATAATAGCCATATCAGATGTTGGGTCCTTCAGAGGCATTACAGGTTCTGCTTGT
TTTGTGAAAACAACTCTCCCATCCAGGAAGGGGGGCTTTGTGTCTGCCAGAAAAAATGAGGCAA
TTAACTTGCCAGATTAAACTGCATTGAACTGCTGTAGAAAAAACAGAAAGACTTGAAACAAATA
AAAGAATAATATCGCTACACACACATTATAGTATCTTAATGCTCTGTGTTATGTAGAAATAATT
ACATAAAGAAAATATAGAGGGCCCCAGATTAGTGTGGATAACAAGGAACCGCAATCGTCTACTA
GCCGTCGAGCCAAGTAGTAATACAAACAGATCTAAAGATCAGATCACTTAAAATCATTGTGCTG
TTGATATCCCATCACCAAAATACTTAATGATTTTTCACAAAAAAAATGTTTAAAAAAACTCGGC
CTATGAGGAAAAACAGCTCCCACTGCATTGCACTTGATAAGAAGCTTCTCACACGCAGACCAAG
AAACACCGCAAAGGCTGACTTCCCTGAACGTGCCACTGAGTGCCCACGTGCATCTTTGAATCTC
ACTGAAAACGACTAGTGTGGTTACATTACACGTATAACTCAGGATCGCAGCTGGCGAAGGGTGT
TTTTTTAACCCAGGCCTGCCTAAAATTCACTCTCACAGGGAAACGAACCTAGGACCTGGCATGC
TACTTAAGCCCTGCTAATCAGTCAGGTAGCAGGACTATTCGCTTCACAAGAAATGTTTTGTATT
CCTTATAAAACTTTACATTAGAAACAGAGGGATGATTCCTAACATGTATGTGATTTCCAAAGCT
TATGGAATCACAGGTATAAAACTACAAGCGCAAAGAAAAGATGTGATAGGCAAACTGGCAAATA
ACATACCATGAACAAGAAGTATTACTTTCCGTTCCTCCTCATCATCAAATTCAGTTTGCACTTC
TGTTCCTTTAACAGCTCCAGATCTCAACAATTGTCTATCCTCCCACTGAGCATTATCAGCAGTC
ATCTGTGACATCTTTTTGCTTTGAGCAAGGGTCATCAGGCTACCATCTCTACGAGTCTGCAACC
GAGAGAAATAGATGTCAAAACCAGAGTACTGCAAAAGTTAAGGCTACAAAAAAAATACATTTTG
ATGTTATCTTTTTTTTCTCGAACAGCGCAGGAGAACTGCACGTCATTTCATGTTAGTTTGATGT
TATCTTTTGATGTTATCTGAAGTTAATTATTTCAAACTTTGACTAGTACCTTTCAATATAATAT
AACCACAGAACATAGCAGATGTATACTTTTATCAAACTATTTTTCAAGACAAATCTACTCATAT
CACTCACAAACATTTAAACTTAATAAGTGAAAAGTAAGTGAAGTCGAGGGAGTACAATGTTTAC
TAGAAAAAATAATTGGGATCATTGAAAAAAAATGAGATATTGGCATCTAATTTCAGCGCACACA
GTTTGACTATATCGAAAAGAACTTATATGAAAATCATAAACCATGCCAAAAGATTAATACAACT
CCCTTTGTGATGATGCACTTTACATGATATACATCTTGTCAGGATCACGGATTTAATAGACGTA
AAATGAAGGATAGTAAGTCAAAGAATAAGACCAAGAAAATCAAAGCATGTGTCTAATTGTTGTT
GGATTACTGTGTCCTACTTTTACTTCTTGCAGGCATTTCACTAGTAGATCATCAGGTGTTTACA
TGAAATGTGATACCAAAGTTCACGATTACGGTAGATCCAACAACTCTTGTTAGAGGCTCATTGT
TTTTTCATCGATGATCACAGCTTCATAGATGTATGTGATCATAGTACTATGTCTGACCCATAAT
AAAGATTAAAGAAACATAAGTATGAAGATTGTGATGGAGTATTTGGGACTTGGTAGTGAAATAT
AGGCACACAAATACGGAACCTACCAGCTTCTTCGGCATCTCTGCTTCCCTCTTTTTGTAGGAAT
TATCATCTCCAAGATACATAGAATGATCACCATCAAACATGGTAGTGTGTTCTTCGCAGTCATA
CCTGAAGAATTCGTAAAGATAAGAACCAAGTAGTTAACTATATTGATATTCTATCTTCTATGAG
CAAAGATTGTTGATTCCTATATTCATTTCCCTCACTAGAACACCAAAGACAGTGTGCTATAGTG
TATGAAATTGTGCTAAATACAAGTAGAAAATATTCACACACAGGACTTCAATATATAAACTAGT
AATAGTAAGTATAAAAAGTTTACTTCGCCAAAGTAGCAGATAGCTCAGTAGTTAATACAAAATA
AAAGGAGCACACAACGAAGCATGCAGGAACAGAAAGCTTTGGCTCATATGTTTGCAATGCCGAC
AAATATCATAAAGCAACAGTAATAATGTCCTTCTGTAATTTAAAAACTGAACAAGGTTTGTAAG
GAAAATTACCATGCACGGTCAGCATTGTAGTCCATCTCCTGCATCATTTCCTCGGTTATCTCAC
TGTTCCTATCAGGATTTGAGGGGCTTCTATCAGCATCAATAATCTGGGATAACAAGGTAGCAGT
TATAGACTTGTACCTTATGATAACAACATGTTGAGGAATGAGAAAATTAAAACAACTTGTCAAG
ACTCAAGATCTCAAAAGCGAACTAAAGAAACATGGCATCCAAAGATCAACTCAACAGGTTGCTA
TCACTAAATTAACTTGGACTCGGGCATGATAAAAAATCACAATGTTGATTGAGTATACCTAAAA
AACAAAGAACAATTGATAAAAATAGTAGTAAGCCTAACAGGCTAAAAGCTATACGTTTGTGAAA
ACTGTTTAGTCAGTAACTAACAAGCTTATTGAATGACACAAAAACCATGACTGCATCGTTACAT
TTAAGCTTAAATCAACCTAGAAAAAGAAGACGTGAAAAAACGTGCACATGTCTCATATATCTTC
TGATTAAGGACATTTTGAAACAACCATAAACAAACTATTGTAGAAAACAGTAAAACACAATAAA
TAAATGGAAAAGAACGTGTTAATCTGAACAAAAGCTCGTGGTTAATCAAATTATGATGACAATA
TGATTCAAACTCACGTTTGATAGCATGAAATAAGTACGCTGCAGAAAATTGAATTCTAGCTTAC
ATTAGAACTAGTAGTTGATGAAAAGGTAAGCTGGTGTGATCTTCCACTGGAATGTGAATAAGAA
GACCCTTTTGAGGAACCAGAAGCACGTATTGGAGCAGGTGAAGGGGATACATTATCCCACGGGG
ACGCTGAACATTAAGAACACAGAGAGGATATTAGTTTCATGATTTAGTTGGGTTACTGAGGTGT
CAAGAGAGTATATTTACTACACAAAAACAAAGCAGTTTTACTGAGAGTCCTGTCTCAACATGCT
TTACCTGCTAGACGTGGTGTATTCCCGTCTAACCAAGGAGATACCAGGCGTGCATCCGGGGATG
CAGCAGCGAGCATAGGAGATCGTGTTGGATGTTGTCTCCGGGAGCCAGGACGATTATCACGATA
ATCTCGACGAGGTGTATCTTCCCATTCCCAGCGTCCATCATCCCAATCAGATCGTGCTAATATT
TGCCAGAGTAATCATACTCCTATCAGTAAAATGTCAATTCAATGATAAGACCAATAAAGAATGC
CAAGCTAAACAAGTACCAGATGTTCTTGAGCTTCTTGAGCTATGCTCATGTCGACTTCTCTTGT
TAGTATATTCATTTGATGTAGACCTCTCACGCTCAGCGCGCCTAGTATGAGATTCTCTATCATC
ATGGTATCTTCGCCTTCCACTATTACTATAGCCAATGGATGCAGATCTCTCACGATCACCATGT
TTATCATGGGATCCTCTATCATCATAGTAACCATAACCACGAGGAGTGCCATGAGGACGAGAAC
CTTGAGAGCTTCTAGAGATGTGGGC
						
					

			
		

Sequences
Splice junction sequence	GATCACCATGTTTATCATGGGATCCTCTATCATCATAGTAACCATAACCACGAGGAGTGCCATG AGGACGAGAACCTTGAGAGCTTCTAGAGATGTGGGCctgtagcagatcatcccggacggtaaat atgggaagatattgcctttgttgagaaagggattttgattttgcaaaatcactgacagcttctg ctttatcc
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CTGTAGCAGATCATCCCGGACGGTAAATATGGGAAGATATTGCCTTTGTTGAGAAAGGGATTTT GATTTTGCAAAATCACTGACAGCTTCTGCTTTATCCTTCAAATGTTGTGAAAACTTTGCTTCTT CTTTAAAATTAATCTCACCTTGGTCACCAACAACAGCAGTATCTGCATCAACCTGATTTTTCAA AGGTGAGTAGGAAACAATGACAAGGAACTGTCTTTCTCAAAACAGATAAATACAAGGGGACAAA AATACCTGTTCAGCTGTTTTCTCAACACCCAAGATATTGCCAAGCTTAGATCCAGCAAGCTCCC AAAATCGTTGCCTTGATTTGTTCATGCTTTGCTTTTCACGGATTTCCCTAACCAGACTAGAACC TTTGCGTGCAATAATAGCCATATCAGATGTTGGGTCCTTCAGAGGCATTACAGGTTCTGCTTGT TTTGTGAAAACAACTCTCCCATCCAGGAAGGGGGGCTTTGTGTCTGCCAGAAAAAATGAGGCAA TTAACTTGCCAGATTAAACTGCATTGAACTGCTGTAGAAAAAACAGAAAGACTTGAAACAAATA AAAGAATAATATCGCTACACACACATTATAGTATCTTAATGCTCTGTGTTATGTAGAAATAATT ACATAAAGAAAATATAGAGGGCCCCAGATTAGTGTGGATAACAAGGAACCGCAATCGTCTACTA GCCGTCGAGCCAAGTAGTAATACAAACAGATCTAAAGATCAGATCACTTAAAATCATTGTGCTG TTGATATCCCATCACCAAAATACTTAATGATTTTTCACAAAAAAAATGTTTAAAAAAACTCGGC CTATGAGGAAAAACAGCTCCCACTGCATTGCACTTGATAAGAAGCTTCTCACACGCAGACCAAG AAACACCGCAAAGGCTGACTTCCCTGAACGTGCCACTGAGTGCCCACGTGCATCTTTGAATCTC ACTGAAAACGACTAGTGTGGTTACATTACACGTATAACTCAGGATCGCAGCTGGCGAAGGGTGT TTTTTTAACCCAGGCCTGCCTAAAATTCACTCTCACAGGGAAACGAACCTAGGACCTGGCATGC TACTTAAGCCCTGCTAATCAGTCAGGTAGCAGGACTATTCGCTTCACAAGAAATGTTTTGTATT CCTTATAAAACTTTACATTAGAAACAGAGGGATGATTCCTAACATGTATGTGATTTCCAAAGCT TATGGAATCACAGGTATAAAACTACAAGCGCAAAGAAAAGATGTGATAGGCAAACTGGCAAATA ACATACCATGAACAAGAAGTATTACTTTCCGTTCCTCCTCATCATCAAATTCAGTTTGCACTTC TGTTCCTTTAACAGCTCCAGATCTCAACAATTGTCTATCCTCCCACTGAGCATTATCAGCAGTC ATCTGTGACATCTTTTTGCTTTGAGCAAGGGTCATCAGGCTACCATCTCTACGAGTCTGCAACC GAGAGAAATAGATGTCAAAACCAGAGTACTGCAAAAGTTAAGGCTACAAAAAAAATACATTTTG ATGTTATCTTTTTTTTCTCGAACAGCGCAGGAGAACTGCACGTCATTTCATGTTAGTTTGATGT TATCTTTTGATGTTATCTGAAGTTAATTATTTCAAACTTTGACTAGTACCTTTCAATATAATAT AACCACAGAACATAGCAGATGTATACTTTTATCAAACTATTTTTCAAGACAAATCTACTCATAT CACTCACAAACATTTAAACTTAATAAGTGAAAAGTAAGTGAAGTCGAGGGAGTACAATGTTTAC TAGAAAAAATAATTGGGATCATTGAAAAAAAATGAGATATTGGCATCTAATTTCAGCGCACACA GTTTGACTATATCGAAAAGAACTTATATGAAAATCATAAACCATGCCAAAAGATTAATACAACT CCCTTTGTGATGATGCACTTTACATGATATACATCTTGTCAGGATCACGGATTTAATAGACGTA AAATGAAGGATAGTAAGTCAAAGAATAAGACCAAGAAAATCAAAGCATGTGTCTAATTGTTGTT GGATTACTGTGTCCTACTTTTACTTCTTGCAGGCATTTCACTAGTAGATCATCAGGTGTTTACA TGAAATGTGATACCAAAGTTCACGATTACGGTAGATCCAACAACTCTTGTTAGAGGCTCATTGT TTTTTCATCGATGATCACAGCTTCATAGATGTATGTGATCATAGTACTATGTCTGACCCATAAT AAAGATTAAAGAAACATAAGTATGAAGATTGTGATGGAGTATTTGGGACTTGGTAGTGAAATAT AGGCACACAAATACGGAACCTACCAGCTTCTTCGGCATCTCTGCTTCCCTCTTTTTGTAGGAAT TATCATCTCCAAGATACATAGAATGATCACCATCAAACATGGTAGTGTGTTCTTCGCAGTCATA CCTGAAGAATTCGTAAAGATAAGAACCAAGTAGTTAACTATATTGATATTCTATCTTCTATGAG CAAAGATTGTTGATTCCTATATTCATTTCCCTCACTAGAACACCAAAGACAGTGTGCTATAGTG TATGAAATTGTGCTAAATACAAGTAGAAAATATTCACACACAGGACTTCAATATATAAACTAGT AATAGTAAGTATAAAAAGTTTACTTCGCCAAAGTAGCAGATAGCTCAGTAGTTAATACAAAATA AAAGGAGCACACAACGAAGCATGCAGGAACAGAAAGCTTTGGCTCATATGTTTGCAATGCCGAC AAATATCATAAAGCAACAGTAATAATGTCCTTCTGTAATTTAAAAACTGAACAAGGTTTGTAAG GAAAATTACCATGCACGGTCAGCATTGTAGTCCATCTCCTGCATCATTTCCTCGGTTATCTCAC TGTTCCTATCAGGATTTGAGGGGCTTCTATCAGCATCAATAATCTGGGATAACAAGGTAGCAGT TATAGACTTGTACCTTATGATAACAACATGTTGAGGAATGAGAAAATTAAAACAACTTGTCAAG ACTCAAGATCTCAAAAGCGAACTAAAGAAACATGGCATCCAAAGATCAACTCAACAGGTTGCTA TCACTAAATTAACTTGGACTCGGGCATGATAAAAAATCACAATGTTGATTGAGTATACCTAAAA AACAAAGAACAATTGATAAAAATAGTAGTAAGCCTAACAGGCTAAAAGCTATACGTTTGTGAAA ACTGTTTAGTCAGTAACTAACAAGCTTATTGAATGACACAAAAACCATGACTGCATCGTTACAT TTAAGCTTAAATCAACCTAGAAAAAGAAGACGTGAAAAAACGTGCACATGTCTCATATATCTTC TGATTAAGGACATTTTGAAACAACCATAAACAAACTATTGTAGAAAACAGTAAAACACAATAAA TAAATGGAAAAGAACGTGTTAATCTGAACAAAAGCTCGTGGTTAATCAAATTATGATGACAATA TGATTCAAACTCACGTTTGATAGCATGAAATAAGTACGCTGCAGAAAATTGAATTCTAGCTTAC ATTAGAACTAGTAGTTGATGAAAAGGTAAGCTGGTGTGATCTTCCACTGGAATGTGAATAAGAA GACCCTTTTGAGGAACCAGAAGCACGTATTGGAGCAGGTGAAGGGGATACATTATCCCACGGGG ACGCTGAACATTAAGAACACAGAGAGGATATTAGTTTCATGATTTAGTTGGGTTACTGAGGTGT CAAGAGAGTATATTTACTACACAAAAACAAAGCAGTTTTACTGAGAGTCCTGTCTCAACATGCT TTACCTGCTAGACGTGGTGTATTCCCGTCTAACCAAGGAGATACCAGGCGTGCATCCGGGGATG CAGCAGCGAGCATAGGAGATCGTGTTGGATGTTGTCTCCGGGAGCCAGGACGATTATCACGATA ATCTCGACGAGGTGTATCTTCCCATTCCCAGCGTCCATCATCCCAATCAGATCGTGCTAATATT TGCCAGAGTAATCATACTCCTATCAGTAAAATGTCAATTCAATGATAAGACCAATAAAGAATGC CAAGCTAAACAAGTACCAGATGTTCTTGAGCTTCTTGAGCTATGCTCATGTCGACTTCTCTTGT TAGTATATTCATTTGATGTAGACCTCTCACGCTCAGCGCGCCTAGTATGAGATTCTCTATCATC ATGGTATCTTCGCCTTCCACTATTACTATAGCCAATGGATGCAGATCTCTCACGATCACCATGT TTATCATGGGATCCTCTATCATCATAGTAACCATAACCACGAGGAGTGCCATGAGGACGAGAAC CTTGAGAGCTTCTAGAGATGTGGGC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.038028165

Conservation Information
Conserved circRNAs	NA
PMCS	0.038028165

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							208869802-208865661(+)
208869513-208865661(-)
208865674-208869465(-)
						
					

						Potential amino acid sequence
						
							MRFSIIMVSSPSTITIANGCRSLTITMFIMGSSIIIVTITTRSAMRTRTLRASRDVGL*(+)
MLAAASPDARLVSPWLDGNTPRLAASPWDNVSPSPAPIRASGSSKGSSYSHSSGRSHQLTFSST
TSSNIIDADRSPSNPDRNSEITEEMMQEMDYNADRAWYDCEEHTTMFDGDHSMYLGDDNSYKKR
EAEMPKKLTRRDGSLMTLAQSKKMSQMTADNAQWEDRQLLRSGAVKGTEVQTEFDDEEERKVIL
LVHDTKPPFLDGRVVFTKQAEPVMPLKDPTSDMAIIARKGSSLVREIREKQSMNKSRQRFWELA
GSKLGNILGVEKTAEQVDADTAVVGDQGEINFKEEAKFSQHLKDKAEAVSDFAKSKSLSQQRQY
LPIFTVRDDLLQAHISRSSQGSRPHGTPRGYGYYDDRGSHDKHGDRERSASIGYSNSGRRRYHD
DRESHTRRAERERSTSNEYTNKRSRHEHSSRSSRTSARSDWDDGRWEWEDTPRRDYRDNRPGSR
RQHPTRSPMLAAASPDARLVSPWLDGNTPRLAASPWDNVSPSPAPIRASGSSKGSSYSHSSGRS
HQLTFSSTTSSNIIDADRSPSNPDRNSEITEEMMQEMDYNADRAWYDCEEHTTMFDGDHSMYLG
DDNSYKKREAEMPKKLTRRDGSLMTLAQSKKMSQMTADNAQWEDRQLLRSGAVKGTEVQTEFDD
EEERKVILLVHDTKPPFLDGRVVFTKQAEPVMPLKDPTSDMAIIARKGSSLVREIREKQSMNKS
RQRFWELAGSKLGNILGVEKTAEQVDADTAVVGDQGEINFKEEAKFSQHLKDKAEAVSDFAKSK
SLSQQRQYLPIFTVRDDLLQAHISRSSQGSRPHGTPRGYGYYDDRGSHDKHGDRERSASIGYSN
SGRRRYHDDRESHTRRAERERSTSNEYTNKRSRHEHSSRSSRTSARSDWDDGRWEWEDTPRRDY
RDNRPGSRRQHPTRSPMLAAASPDARLVSPWLDGNTPRLAASPWDNVSPSPAPIRASGSSKGSS
YSHSSGRSHQLTFSSTTSSNIIDADRSPSNPDRNSEITEEMMQEMDYNADRAWYDCEEHTTMFD
GDHSMYLGDDNSYKKREAEMPKKLTRRDGSLMTLAQSKKMSQMTADNAQWEDRQLLRSGAVKGT
EVQTEFDDEEERKVILLVHDTKPPFLDGRVVFTKQAEPVMPLKDPTSDMAIIARKGSSLVREIR
EKQSMNKSRQRFWELAGSKLGNILGVEKTAEQVDADTAVVGDQGEINFKEEAKFSQHLKDKAEA
VSDFAKSKSLSQQRQYLPIFTVRDDLLQAHISRSSQGSRPHGTPRGYGYYDDRGSHDKHGDRER
SASIGYSNSGRRRYHDDRESHTRRAERERSTSNEYTNKRSRHEHSSRSSRTSARSDWDDGRWEW
EDTPRRDYRDNRPGSRRQHPTRSPMLAAASPDARLVSPWLDGNTPRLAASPWDNVSPSPAPIRA
SGSSKGSSYSHSSGRSHQLTFSSTTSSNIIDADRSPSNPDRNSEITEEMMQEMDYNADRAWYDC
EEHTTMFDGDHSMYLGDDNSYKKREAEMPKKLTRRDGSLMTLAQSKKMSQMTADNAQWEDRQLL
RSGAVKGTEVQTEFDDEEERKVILLVHDTKPPFLDGRVVFTKQAEPVMPLKDPTSDMAIIARKG
SSLVREIREKQSMNKSRQRFWELAGSKLGNILGVEKTAEQVDADTAVVGDQGEINFKEEAKFSQ
HLKDKAEAVSDFAKSKSLSQQRQYLPIFTVRDDLLQ(-)
MICYRPTSLEALKVLVLMALLVVMVTMMIEDPMINMVIVRDLHPLAIVIVEGEDTMMIENLILG
ALSVRGLHQMNILTREVDMSIAQEAQEHLHDLIGMMDAGNGKIHLVEIIVIIVLAPGDNIQHDL
LCSLLHPRMHAWYLLG*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	208869802-208865661(+) 208869513-208865661(-) 208865674-208869465(-)
Potential amino acid sequence	MRFSIIMVSSPSTITIANGCRSLTITMFIMGSSIIIVTITTRSAMRTRTLRASRDVGL(+) MLAAASPDARLVSPWLDGNTPRLAASPWDNVSPSPAPIRASGSSKGSSYSHSSGRSHQLTFSST TSSNIIDADRSPSNPDRNSEITEEMMQEMDYNADRAWYDCEEHTTMFDGDHSMYLGDDNSYKKR EAEMPKKLTRRDGSLMTLAQSKKMSQMTADNAQWEDRQLLRSGAVKGTEVQTEFDDEEERKVIL LVHDTKPPFLDGRVVFTKQAEPVMPLKDPTSDMAIIARKGSSLVREIREKQSMNKSRQRFWELA GSKLGNILGVEKTAEQVDADTAVVGDQGEINFKEEAKFSQHLKDKAEAVSDFAKSKSLSQQRQY LPIFTVRDDLLQAHISRSSQGSRPHGTPRGYGYYDDRGSHDKHGDRERSASIGYSNSGRRRYHD DRESHTRRAERERSTSNEYTNKRSRHEHSSRSSRTSARSDWDDGRWEWEDTPRRDYRDNRPGSR RQHPTRSPMLAAASPDARLVSPWLDGNTPRLAASPWDNVSPSPAPIRASGSSKGSSYSHSSGRS HQLTFSSTTSSNIIDADRSPSNPDRNSEITEEMMQEMDYNADRAWYDCEEHTTMFDGDHSMYLG DDNSYKKREAEMPKKLTRRDGSLMTLAQSKKMSQMTADNAQWEDRQLLRSGAVKGTEVQTEFDD EEERKVILLVHDTKPPFLDGRVVFTKQAEPVMPLKDPTSDMAIIARKGSSLVREIREKQSMNKS RQRFWELAGSKLGNILGVEKTAEQVDADTAVVGDQGEINFKEEAKFSQHLKDKAEAVSDFAKSK SLSQQRQYLPIFTVRDDLLQAHISRSSQGSRPHGTPRGYGYYDDRGSHDKHGDRERSASIGYSN SGRRRYHDDRESHTRRAERERSTSNEYTNKRSRHEHSSRSSRTSARSDWDDGRWEWEDTPRRDY RDNRPGSRRQHPTRSPMLAAASPDARLVSPWLDGNTPRLAASPWDNVSPSPAPIRASGSSKGSS YSHSSGRSHQLTFSSTTSSNIIDADRSPSNPDRNSEITEEMMQEMDYNADRAWYDCEEHTTMFD GDHSMYLGDDNSYKKREAEMPKKLTRRDGSLMTLAQSKKMSQMTADNAQWEDRQLLRSGAVKGT EVQTEFDDEEERKVILLVHDTKPPFLDGRVVFTKQAEPVMPLKDPTSDMAIIARKGSSLVREIR EKQSMNKSRQRFWELAGSKLGNILGVEKTAEQVDADTAVVGDQGEINFKEEAKFSQHLKDKAEA VSDFAKSKSLSQQRQYLPIFTVRDDLLQAHISRSSQGSRPHGTPRGYGYYDDRGSHDKHGDRER SASIGYSNSGRRRYHDDRESHTRRAERERSTSNEYTNKRSRHEHSSRSSRTSARSDWDDGRWEW EDTPRRDYRDNRPGSRRQHPTRSPMLAAASPDARLVSPWLDGNTPRLAASPWDNVSPSPAPIRA SGSSKGSSYSHSSGRSHQLTFSSTTSSNIIDADRSPSNPDRNSEITEEMMQEMDYNADRAWYDC EEHTTMFDGDHSMYLGDDNSYKKREAEMPKKLTRRDGSLMTLAQSKKMSQMTADNAQWEDRQLL RSGAVKGTEVQTEFDDEEERKVILLVHDTKPPFLDGRVVFTKQAEPVMPLKDPTSDMAIIARKG SSLVREIREKQSMNKSRQRFWELAGSKLGNILGVEKTAEQVDADTAVVGDQGEINFKEEAKFSQ HLKDKAEAVSDFAKSKSLSQQRQYLPIFTVRDDLLQ(-) MICYRPTSLEALKVLVLMALLVVMVTMMIEDPMINMVIVRDLHPLAIVIVEGEDTMMIENLILG ALSVRGLHQMNILTREVDMSIAQEAQEHLHDLIGMMDAGNGKIHLVEIIVIIVLAPGDNIQHDL LCSLLHPRMHAWYLLG(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ma et al., 2021b

circRNA

Detail information of Zm00001d006459_circ_g.3

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