Plant Circular RNA Database

Detail information of Os07g0568000_circ_g.1

			
						 General Information
					
						CircRNA Name
						Os07g0568000_circ_g.1
					
						ID in PlantcircBase
						osa_circ_034349
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr7: 22817861-22821338  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os07g0568000						
					
						Parent gene annotation
						
							Apolipophorin III-like domain containing protein. (Os07t0568000-
01);Similar to predicted protein. (Os07t0568000-02);Similar to p
redicted protein. (Os07t0568000-03);Apolipophorin III-like domai
n containing protein. (Os07t0568000-04)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os07g0568000_circ_g.2 						
					
						Support reads
						1
					
						Tissues
						shoot
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os07t0568000-04:4
Os07t0568000-01:4
Os07t0568000-02:3
Os07t0568000-03:2

General Information
CircRNA Name	Os07g0568000_circ_g.1
ID in PlantcircBase	osa_circ_034349
Alias	NA
Organism	Oryza sativa
Position	chr7: 22817861-22821338 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os07g0568000
Parent gene annotation	Apolipophorin III-like domain containing protein. (Os07t0568000- 01);Similar to predicted protein. (Os07t0568000-02);Similar to p redicted protein. (Os07t0568000-03);Apolipophorin III-like domai n containing protein. (Os07t0568000-04)
Parent gene strand	-
Alternative splicing	Os07g0568000_circ_g.2
Support reads	1
Tissues	shoot
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os07t0568000-04:4 Os07t0568000-01:4 Os07t0568000-02:3 Os07t0568000-03:2

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TTAACCTGAGGAAAGCGTGGTATTTCGACTGCATATTCCCGCACAAGTTTTCGATAGCATCCTT
CAACTCCAGTAGCTCAGAGCAAATTTTCCTGATGCCctgctgtagtcctgaaggccggagttgg
atggattgatcctcgaaaacatcccagaattcctgttcattggagagccacatgacaaccgttt
cagttagc

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CTGCTGTAGTCCTGAAGGCCGGAGTTGGATGGATTGATCCTCGAAAACATCCCAGAATTCCTGT
TCATTGGAGAGCCACATGACAACCGTTTCAGTTAGCCTTGAGAGCAAGACCTTCTGTATCTTCT
CTTTACCCAGTAAGACATCACCAGCAACACTAGCTAGCTGCCGTAACTTTACAAACAGCGCCTG
AGAAAAATATATAGATAGATAGGTGAGATAACTGTGTTTTTTTGTTTAAGCAGTAAATTAATTA
GCTTGAGGATAACACAAACACATTGCCTTTGCTCTCTTAAAATACATCAAAGGCACTGTATGTA
ATCATCTGAACAGAAATGCATGATAAATTGAGCTGAAATTATTAAGTCATCTTTAACATGTTCA
GATTTCTATTTTTAACATCAAAGGTACTGTATCTAATCATTTTTAAGTCAATGTATGTCCTCCC
CTTCACCAGTTTCAAGCTAATAGGAATGATCCACTCAGAAATGGGGATGAGGATTCCCATATAA
TAAAATGTCATGCTTTGTGATGGACTGAAGCAACTTTAGTGTAGACAAACTTAGAAGACTTGAT
AAGGGAATAGGAGTCCACATGGCAACTAGCCCTATGTTGACTAAATGATGCACTTTTCTGTTTA
GTGTTAACTAGCAAATGAAATGTAATTAAATTAAAGATCAATTTTGAGATTGAAAGGAAACAAG
AAAACAGTTATCAAAGAAATATTATGTTCCTAAGTTATCCCCTTGTGCACAGCATGATGGTCCA
AAAGTAGTACCAGACATCGCAGCATCATCCTTTTTTCAGTTTGATCCTATCCTTATAAACAGGG
GATTGTTTTAATATAGACCTGTGAACTGCAATGCCGTGGTTTTTTCATGGTGACAAGAAATCAT
TTTGAGCTTTTAACACGATCGATGCAAAAAACTGATATCACATCATTGAAATGGAATCACCTGG
AAAGGCAGAGAAGGTGAAGGATCACACTCCCAAAGAAGATCATCAGTTTTCAGCTCCAAGTACA
TTCTAGCATCCAGTCGTGATTTCCCTTCTAAGTAAATAAATGATAAGACATACTGTAGGCAAAA
ATGATCCCTCAGTTTGTCCAGTGAATGTTGCAGACTACGTTTCCACTCTTTGTATTCTATGGAG
TATATAGATCCAGAGCCAAGGCCCTCGCCTGTTCCACCAATTCTCTTCTTCTCGGTTTGGATAT
CAAAAAATTTGGATACAGCTGCTGGCAATAATTCATCTGCTACAGTGTATGCTGTTCCAATGAG
TTGAATCTGCTGGGCATCACTCTCTGCTTTAAATTCTATAGGCTCTTTTGACTCCACTAGATGA
TCATCCTCAGAAGCTCCTGGTAAGACTTCAATTAGTGCTTCAACATATTTATCAAATAGCTGGA
CAAATTTATTCAAAATCGTTCCTCCAAAGTGAACTATAGTCATTGGGGTAATTTGATCCAAAAC
ATCCTGAAAGAAGCAGATACAGAGATCAGCTGCTTCATAATATAGACAACAGGTGGTGTACATT
AAATTCTAAAGCAACTCGATGAACTGCACGCTGTTCTAATTTCCATTCATTCCATAAAAGTGTG
TCATTTCCAAATTTCTGTAATAGGCTATAGTATTTTGGTGCCTGCACTAACTAATGCTAGTGGG
CCACGTATATTTATCATATGTATGTGGGCGCAGGGATATGTTACATGTATCTTTGGTTGCTTTC
TACCAAGTAAATAACATAAAGCAACGGCGTACATTAATCCAGGTGTAATTTCAACAAGGTTTTC
AAGTGGTGCTAGAAACCCATACCAACAAAAAGAAATGCTGCTATAGTGCTAGAAACCAGGAAAT
CATGTGTATCTTAAAATGAGAATGCATTGGATTTAATACATATCGAGTTTAGTGACAGGATCAT
TCAATTACTTAATAATATTGTTCAGTTGAACACAACAGAAAACTGAATTGTCAGACACATTAAG
AAAAAAGGTTGTAATAAGGAAAATCCAGTAAAAAGAATAAAACAGGAACTCACATTGACAATGG
ACATGAACTTCTTTCCACTGCTTGTAAGCATTATATTTGGTGCAACTGAACTAGAGAGCCGTGA
TCCTTCTTGAGGGCTGGGAAGCAGAATATCATCATTTTTTGCTGAATCTACAATCTTTCTTCTC
AGCCTTCTAAAATTCAGCTCAAGCACTTCTTCAACATAGGGGTGCAATAGTACCATTAGTAAAT
TTGAGAATTTCAGGCCATATGATTCTAGATAAGAGCAGTGAGTGAGACTAGTTTGGATGCATAT
GCAGGCAGAACGAAGGGCAGATACGCTCTCAGGCAAAGGAGAATTTTCCTTAACCAAACGCGCA
AAGGTTTCTATTTCATATTCAGCCCACTGAATAATCCGGTTCAAATTCATGGGGCTATCCCCAA
ATAGCGAACTAGATTCTTTGGATACCTTTGAGATAGCTGAGAAAACAATCTTTGACAAAGTTGC
AGAGTAAGTTTCTGTGTAGATCGAACATGTTGGAAGAAATGCTTCAACATTTTTCTGAAGACGT
GACCCATAAGCTTTTAGAAGTACTTGGTGGGCTAGAGAACCTTTGCCAATCTTAATAAGGCCAG
ACAAAGATTTCCTTAGCTCGGTAATAGATAAAGAAGGCTGTTCTGAATACCTAACAAGCTGATC
CTCAAGAATTGATTTCCTTTTAGATAGTGCTGTCTTATAGGTAGAAATCTCTGCATCTAATTCT
TTGCCAGGATCATCCGTAGCCATACATTTCTTCTCTTCGGTTTCCAAAGCAAGCAATGCCTCCT
CTATTTTGTGCTCCGCGAGCAAAGTATCTAATTTATCCAGAAAACTAACCTTGGAATCTTGGGT
ATCATATGACAAAATTTCATCAAGTTCTGTTTGAAGGTCTTTCTCTTCCACATGTTCATCCTTG
CAATGTTTTTGCCACATTTCGAGTTCACGGCACACACCGCTCATTAGATCTTGCACAAGAATCC
CCTGGGCAGACACATGCTTCTGCAACTCAATTAATTCTTGTTCTGCCTCAACAACCTCCTCAGA
TATTCTGCATGAAGAAAACAAACACCAGAAAACATTGCGGTAGATTAAAAACAGCAAATGAGTG
CAAGGAAGTAGGAAGAAACGCTAAACATTATATATTACTTTCTAAATTTATAGCGACTCAAAGA
TAAAAGCTGAATCGTGCGTTAACAAAAACATTGATGAACTTGGGAAAAGGTTAACTTGTACGTT
TCAGCAACAAGACTTAGTAAAGAATAAACGACCAACAAGAATATAAAGGGAAGGATCCATAGAG
ACAACATTCTCTCTAATATCAGAAGGGAATGAATCGATCAGTAATTAACATTAACCTGAGGAAA
GCGTGGTATTTCGACTGCATATTCCCGCACAAGTTTTCGATAGCATCCTTCAACTCCAGTAGCT
CAGAGCAAATTTTCCTGATGCC
						
					

			
		

Sequences
Splice junction sequence	TTAACCTGAGGAAAGCGTGGTATTTCGACTGCATATTCCCGCACAAGTTTTCGATAGCATCCTT CAACTCCAGTAGCTCAGAGCAAATTTTCCTGATGCCctgctgtagtcctgaaggccggagttgg atggattgatcctcgaaaacatcccagaattcctgttcattggagagccacatgacaaccgttt cagttagc
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CTGCTGTAGTCCTGAAGGCCGGAGTTGGATGGATTGATCCTCGAAAACATCCCAGAATTCCTGT TCATTGGAGAGCCACATGACAACCGTTTCAGTTAGCCTTGAGAGCAAGACCTTCTGTATCTTCT CTTTACCCAGTAAGACATCACCAGCAACACTAGCTAGCTGCCGTAACTTTACAAACAGCGCCTG AGAAAAATATATAGATAGATAGGTGAGATAACTGTGTTTTTTTGTTTAAGCAGTAAATTAATTA GCTTGAGGATAACACAAACACATTGCCTTTGCTCTCTTAAAATACATCAAAGGCACTGTATGTA ATCATCTGAACAGAAATGCATGATAAATTGAGCTGAAATTATTAAGTCATCTTTAACATGTTCA GATTTCTATTTTTAACATCAAAGGTACTGTATCTAATCATTTTTAAGTCAATGTATGTCCTCCC CTTCACCAGTTTCAAGCTAATAGGAATGATCCACTCAGAAATGGGGATGAGGATTCCCATATAA TAAAATGTCATGCTTTGTGATGGACTGAAGCAACTTTAGTGTAGACAAACTTAGAAGACTTGAT AAGGGAATAGGAGTCCACATGGCAACTAGCCCTATGTTGACTAAATGATGCACTTTTCTGTTTA GTGTTAACTAGCAAATGAAATGTAATTAAATTAAAGATCAATTTTGAGATTGAAAGGAAACAAG AAAACAGTTATCAAAGAAATATTATGTTCCTAAGTTATCCCCTTGTGCACAGCATGATGGTCCA AAAGTAGTACCAGACATCGCAGCATCATCCTTTTTTCAGTTTGATCCTATCCTTATAAACAGGG GATTGTTTTAATATAGACCTGTGAACTGCAATGCCGTGGTTTTTTCATGGTGACAAGAAATCAT TTTGAGCTTTTAACACGATCGATGCAAAAAACTGATATCACATCATTGAAATGGAATCACCTGG AAAGGCAGAGAAGGTGAAGGATCACACTCCCAAAGAAGATCATCAGTTTTCAGCTCCAAGTACA TTCTAGCATCCAGTCGTGATTTCCCTTCTAAGTAAATAAATGATAAGACATACTGTAGGCAAAA ATGATCCCTCAGTTTGTCCAGTGAATGTTGCAGACTACGTTTCCACTCTTTGTATTCTATGGAG TATATAGATCCAGAGCCAAGGCCCTCGCCTGTTCCACCAATTCTCTTCTTCTCGGTTTGGATAT CAAAAAATTTGGATACAGCTGCTGGCAATAATTCATCTGCTACAGTGTATGCTGTTCCAATGAG TTGAATCTGCTGGGCATCACTCTCTGCTTTAAATTCTATAGGCTCTTTTGACTCCACTAGATGA TCATCCTCAGAAGCTCCTGGTAAGACTTCAATTAGTGCTTCAACATATTTATCAAATAGCTGGA CAAATTTATTCAAAATCGTTCCTCCAAAGTGAACTATAGTCATTGGGGTAATTTGATCCAAAAC ATCCTGAAAGAAGCAGATACAGAGATCAGCTGCTTCATAATATAGACAACAGGTGGTGTACATT AAATTCTAAAGCAACTCGATGAACTGCACGCTGTTCTAATTTCCATTCATTCCATAAAAGTGTG TCATTTCCAAATTTCTGTAATAGGCTATAGTATTTTGGTGCCTGCACTAACTAATGCTAGTGGG CCACGTATATTTATCATATGTATGTGGGCGCAGGGATATGTTACATGTATCTTTGGTTGCTTTC TACCAAGTAAATAACATAAAGCAACGGCGTACATTAATCCAGGTGTAATTTCAACAAGGTTTTC AAGTGGTGCTAGAAACCCATACCAACAAAAAGAAATGCTGCTATAGTGCTAGAAACCAGGAAAT CATGTGTATCTTAAAATGAGAATGCATTGGATTTAATACATATCGAGTTTAGTGACAGGATCAT TCAATTACTTAATAATATTGTTCAGTTGAACACAACAGAAAACTGAATTGTCAGACACATTAAG AAAAAAGGTTGTAATAAGGAAAATCCAGTAAAAAGAATAAAACAGGAACTCACATTGACAATGG ACATGAACTTCTTTCCACTGCTTGTAAGCATTATATTTGGTGCAACTGAACTAGAGAGCCGTGA TCCTTCTTGAGGGCTGGGAAGCAGAATATCATCATTTTTTGCTGAATCTACAATCTTTCTTCTC AGCCTTCTAAAATTCAGCTCAAGCACTTCTTCAACATAGGGGTGCAATAGTACCATTAGTAAAT TTGAGAATTTCAGGCCATATGATTCTAGATAAGAGCAGTGAGTGAGACTAGTTTGGATGCATAT GCAGGCAGAACGAAGGGCAGATACGCTCTCAGGCAAAGGAGAATTTTCCTTAACCAAACGCGCA AAGGTTTCTATTTCATATTCAGCCCACTGAATAATCCGGTTCAAATTCATGGGGCTATCCCCAA ATAGCGAACTAGATTCTTTGGATACCTTTGAGATAGCTGAGAAAACAATCTTTGACAAAGTTGC AGAGTAAGTTTCTGTGTAGATCGAACATGTTGGAAGAAATGCTTCAACATTTTTCTGAAGACGT GACCCATAAGCTTTTAGAAGTACTTGGTGGGCTAGAGAACCTTTGCCAATCTTAATAAGGCCAG ACAAAGATTTCCTTAGCTCGGTAATAGATAAAGAAGGCTGTTCTGAATACCTAACAAGCTGATC CTCAAGAATTGATTTCCTTTTAGATAGTGCTGTCTTATAGGTAGAAATCTCTGCATCTAATTCT TTGCCAGGATCATCCGTAGCCATACATTTCTTCTCTTCGGTTTCCAAAGCAAGCAATGCCTCCT CTATTTTGTGCTCCGCGAGCAAAGTATCTAATTTATCCAGAAAACTAACCTTGGAATCTTGGGT ATCATATGACAAAATTTCATCAAGTTCTGTTTGAAGGTCTTTCTCTTCCACATGTTCATCCTTG CAATGTTTTTGCCACATTTCGAGTTCACGGCACACACCGCTCATTAGATCTTGCACAAGAATCC CCTGGGCAGACACATGCTTCTGCAACTCAATTAATTCTTGTTCTGCCTCAACAACCTCCTCAGA TATTCTGCATGAAGAAAACAAACACCAGAAAACATTGCGGTAGATTAAAAACAGCAAATGAGTG CAAGGAAGTAGGAAGAAACGCTAAACATTATATATTACTTTCTAAATTTATAGCGACTCAAAGA TAAAAGCTGAATCGTGCGTTAACAAAAACATTGATGAACTTGGGAAAAGGTTAACTTGTACGTT TCAGCAACAAGACTTAGTAAAGAATAAACGACCAACAAGAATATAAAGGGAAGGATCCATAGAG ACAACATTCTCTCTAATATCAGAAGGGAATGAATCGATCAGTAATTAACATTAACCTGAGGAAA GCGTGGTATTTCGACTGCATATTCCCGCACAAGTTTTCGATAGCATCCTTCAACTCCAGTAGCT CAGAGCAAATTTTCCTGATGCC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.153481692

Conservation Information
Conserved circRNAs	NA
PMCS	0.153481692

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							22821274-22817863(-)
22817930-22821304(-)
						
					

						Potential amino acid sequence
						
							MQSKYHAFLRISEEVVEAEQELIELQKHVSAQGILVQDLMSGVCRELEMWQKHCKDEHVEEKDL
QTELDEILSYDTQDSKVSFLDKLDTLLAEHKIEEALLALETEEKKCMATDDPGKELDAEISTYK
TALSKRKSILEDQLVRYSEQPSLSITELRKSLSGLIKIGKGSLAHQVLLKAYGSRLQKNVEAFL
PTCSIYTETYSATLSKIVFSAISKVSKESSSLFGDSPMNLNRIIQWAEYEIETFARLVKENSPL
PESVSALRSACICIQTSLTHCSYLESYGLKFSNLLMVLLHPYVEEVLELNFRRLRRKIVDSAKN
DDILLPSPQEGSRLSSSVAPNIMLTSSGKKFMSIVNDVLDQITPMTIVHFGGTILNKFVQLFDK
YVEALIEVLPGASEDDHLVESKEPIEFKAESDAQQIQLIGTAYTVADELLPAAVSKFFDIQTEK
KRIGGTGEGLGSGSIYSIEYKEWKRSLQHSLDKLRDHFCLQYVLSFIYLEGKSRLDARMYLELK
TDDLLWECDPSPSLPFQALFVKLRQLASVAGDVLLGKEKIQKVLLSRLTETVVMWLSNEQEFWD
VFEDQSIQLRPSGLQQGIRKICSELLELKDAIENLCGNMQSKYHAFLRISEEVVEAEQELIELQ
KHVSAQGILVQDLMSGVCRELEMWQKHCKDEHVEEKDLQTELDEILSYDTQDSKVSFLDKLDTL
LAEHKIEEALLALETEEKKCMATDDPGKELDAEISTYKTALSKRKSILEDQLVRYSEQPSLSIT
ELRKSLSGLIKIGKGSLAHQVLLKAYGSRLQKNVEAFLPTCSIYTETYSATLSKIVFSAISKVS
KESSSLFGDSPMNLNRIIQWAEYEIETFARLVKENSPLPESVSALRSACICIQTSLTHCSYLES
YGLKFSNLLMVLLHPYVEEVLELNFRRLRRKIVDSAKNDDILLPSPQEGSRLSSSVAPNIMLTS
SGKKFMSIVNDVLDQITPMTIVHFGGTILNKFVQLFDKYVEALIEVLPGASEDDHLVESKEPIE
FKAESDAQQIQLIGTAYTVADELLPAAVSKFFDIQTEKKRIGGTGEGLGSGSIYSIEYKEWKRS
LQHSLDKLRDHFCLQYVLSFIYLEGKSRLDARMYLELKTDDLLWECDPSPSLPFQALFVKLRQL
ASVAGDVLLGKEKIQKVLLSRLTETVVMWLSNEQEFWDVFEDQSIQLRPSGLQQGIRKICSELL
ELKDAIENLCGNMQSKYHAFLRISEEVVEAEQELIELQKHVSAQGILVQDLMSGVCRELEMWQK
HCKDEHVEEKDLQTELDEILSYDTQDSKVSFLDKLDTLLAEHKIEEALLALETEEKKCMATDDP
GKELDAEISTYKTALSKRKSILEDQLVRYSEQPSLSITELRKSLSGLIKIGKGSLAHQVLLKAY
GSRLQKNVEAFLPTCSIYTETYSATLSKIVFSAISKVSKESSSLFGDSPMNLNRIIQWAEYEIE
TFARLVKENSPLPESVSALRSACICIQTSLTHCSYLESYGLKFSNLLMVLLHPYVEEVLELNFR
RLRRKIVDSAKNDDILLPSPQEGSRLSSSVAPNIMLTSSGKKFMSIVNDVLDQITPMTIVHFGG
TILNKFVQLFDKYVEALIEVLPGASEDDHLVESKEPIEFKAESDAQQIQLIGTAYTVADELLPA
AVSKFFDIQTEKKRIGGTGEGLGSGSIYSIEYKEWKRSLQHSLDKLRDHFCLQYVLSFIYLEGK
SRLDARMYLELKTDDLLWECDPSPSLPFQALFVKLRQLASVAGDVLLGKEKIQKVLLSRLTETV
VMWLSNEQEFWDVFEDQSIQLRPSGLQQGIRKICSELLELKDAIENLCGNMQSKYHAFLRISEE
VVEAEQELIELQKHVSAQGILVQDLMSGVCRELEMWQKHCKDEHVEEKDLQTELDEILSYDTQD
SKVSFLDKLDTLLAEHKIEEALLALETEEKKCMATDDPGKELDAEISTYKTALSKRKSILEDQL
VRYSEQPSLSITELRKSLSGLIKIGKGSLAHQVLLKAYGSRLQKNVEAFLPTCSIYTETYSATL
SKIVFSAISKVSKESSSLFGDSPMNLNRIIQWAEYEIETFARLVKENSPLPESVSALRSACICI
QTSLTHCSYLESYGLKFSNLLMVLLHPYVEEVLELNFRRLRRKIVDSAKNDDILLPSPQEGSRL
SSSVAPNIMLTSSGKKFMSIVNDVLDQITPMTIVHFGGTILNKFVQLFDKYVEALIEVLPGASE
DDHLVESKEPIEFKAESDAQQIQLIGTAYTVADELLPAAVSKFFDIQTEKKRIGGTGEGLGSGS
IYSIEYKEWKRSLQHSLDKLRDHFCLQYVLSFIYLEGKSRLDARMYLELKTDDLLWECDPSPSL
PFQALFVKLRQLASVAGDVLLGKEKIQKVLLSRLTETVVMWLSNEQEFWDVFEDQSIQLRPSGL
QQ(-)
MNRNSGMFSRINPSNSGLQDYSRASGKFALSYWS*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	22821274-22817863(-) 22817930-22821304(-)
Potential amino acid sequence	MQSKYHAFLRISEEVVEAEQELIELQKHVSAQGILVQDLMSGVCRELEMWQKHCKDEHVEEKDL QTELDEILSYDTQDSKVSFLDKLDTLLAEHKIEEALLALETEEKKCMATDDPGKELDAEISTYK TALSKRKSILEDQLVRYSEQPSLSITELRKSLSGLIKIGKGSLAHQVLLKAYGSRLQKNVEAFL PTCSIYTETYSATLSKIVFSAISKVSKESSSLFGDSPMNLNRIIQWAEYEIETFARLVKENSPL PESVSALRSACICIQTSLTHCSYLESYGLKFSNLLMVLLHPYVEEVLELNFRRLRRKIVDSAKN DDILLPSPQEGSRLSSSVAPNIMLTSSGKKFMSIVNDVLDQITPMTIVHFGGTILNKFVQLFDK YVEALIEVLPGASEDDHLVESKEPIEFKAESDAQQIQLIGTAYTVADELLPAAVSKFFDIQTEK KRIGGTGEGLGSGSIYSIEYKEWKRSLQHSLDKLRDHFCLQYVLSFIYLEGKSRLDARMYLELK TDDLLWECDPSPSLPFQALFVKLRQLASVAGDVLLGKEKIQKVLLSRLTETVVMWLSNEQEFWD VFEDQSIQLRPSGLQQGIRKICSELLELKDAIENLCGNMQSKYHAFLRISEEVVEAEQELIELQ KHVSAQGILVQDLMSGVCRELEMWQKHCKDEHVEEKDLQTELDEILSYDTQDSKVSFLDKLDTL LAEHKIEEALLALETEEKKCMATDDPGKELDAEISTYKTALSKRKSILEDQLVRYSEQPSLSIT ELRKSLSGLIKIGKGSLAHQVLLKAYGSRLQKNVEAFLPTCSIYTETYSATLSKIVFSAISKVS KESSSLFGDSPMNLNRIIQWAEYEIETFARLVKENSPLPESVSALRSACICIQTSLTHCSYLES YGLKFSNLLMVLLHPYVEEVLELNFRRLRRKIVDSAKNDDILLPSPQEGSRLSSSVAPNIMLTS SGKKFMSIVNDVLDQITPMTIVHFGGTILNKFVQLFDKYVEALIEVLPGASEDDHLVESKEPIE FKAESDAQQIQLIGTAYTVADELLPAAVSKFFDIQTEKKRIGGTGEGLGSGSIYSIEYKEWKRS LQHSLDKLRDHFCLQYVLSFIYLEGKSRLDARMYLELKTDDLLWECDPSPSLPFQALFVKLRQL ASVAGDVLLGKEKIQKVLLSRLTETVVMWLSNEQEFWDVFEDQSIQLRPSGLQQGIRKICSELL ELKDAIENLCGNMQSKYHAFLRISEEVVEAEQELIELQKHVSAQGILVQDLMSGVCRELEMWQK HCKDEHVEEKDLQTELDEILSYDTQDSKVSFLDKLDTLLAEHKIEEALLALETEEKKCMATDDP GKELDAEISTYKTALSKRKSILEDQLVRYSEQPSLSITELRKSLSGLIKIGKGSLAHQVLLKAY GSRLQKNVEAFLPTCSIYTETYSATLSKIVFSAISKVSKESSSLFGDSPMNLNRIIQWAEYEIE TFARLVKENSPLPESVSALRSACICIQTSLTHCSYLESYGLKFSNLLMVLLHPYVEEVLELNFR RLRRKIVDSAKNDDILLPSPQEGSRLSSSVAPNIMLTSSGKKFMSIVNDVLDQITPMTIVHFGG TILNKFVQLFDKYVEALIEVLPGASEDDHLVESKEPIEFKAESDAQQIQLIGTAYTVADELLPA AVSKFFDIQTEKKRIGGTGEGLGSGSIYSIEYKEWKRSLQHSLDKLRDHFCLQYVLSFIYLEGK SRLDARMYLELKTDDLLWECDPSPSLPFQALFVKLRQLASVAGDVLLGKEKIQKVLLSRLTETV VMWLSNEQEFWDVFEDQSIQLRPSGLQQGIRKICSELLELKDAIENLCGNMQSKYHAFLRISEE VVEAEQELIELQKHVSAQGILVQDLMSGVCRELEMWQKHCKDEHVEEKDLQTELDEILSYDTQD SKVSFLDKLDTLLAEHKIEEALLALETEEKKCMATDDPGKELDAEISTYKTALSKRKSILEDQL VRYSEQPSLSITELRKSLSGLIKIGKGSLAHQVLLKAYGSRLQKNVEAFLPTCSIYTETYSATL SKIVFSAISKVSKESSSLFGDSPMNLNRIIQWAEYEIETFARLVKENSPLPESVSALRSACICI QTSLTHCSYLESYGLKFSNLLMVLLHPYVEEVLELNFRRLRRKIVDSAKNDDILLPSPQEGSRL SSSVAPNIMLTSSGKKFMSIVNDVLDQITPMTIVHFGGTILNKFVQLFDKYVEALIEVLPGASE DDHLVESKEPIEFKAESDAQQIQLIGTAYTVADELLPAAVSKFFDIQTEKKRIGGTGEGLGSGS IYSIEYKEWKRSLQHSLDKLRDHFCLQYVLSFIYLEGKSRLDARMYLELKTDDLLWECDPSPSL PFQALFVKLRQLASVAGDVLLGKEKIQKVLLSRLTETVVMWLSNEQEFWDVFEDQSIQLRPSGL QQ(-) MNRNSGMFSRINPSNSGLQDYSRASGKFALSYWS*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os07g0568000_circ_g.1

Address

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