Plant Circular RNA Database

Detail information of BGIOSGA009544_circ_g.3

			
						 General Information
					
						CircRNA Name
						BGIOSGA009544_circ_g.3
					
						ID in PlantcircBase
						osi_circ_005213
					
						Alias
						3:38907206|38911509
					
						Organism
						
							Oryza sativa ssp. indica						
					
						Position
						
							chr3: 38907206-38911509  JBrowse»						
					
						Reference genome
						
							Oryza_indica.ASM465v1.42						
					
						Type  
						
							e-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							BGIOSGA009544						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						-
					
						Alternative splicing
						
							BGIOSGA009544_circ_g.1 BGIOSGA009544_circ_g.2 						
					
						Support reads
						NA
					
						Tissues
						leaf
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						BGIOSGA009544-TA:9

General Information
CircRNA Name	BGIOSGA009544_circ_g.3
ID in PlantcircBase	osi_circ_005213
Alias	3:38907206\|38911509
Organism	Oryza sativa ssp. indica
Position	chr3: 38907206-38911509 JBrowse»
Reference genome	Oryza_indica.ASM465v1.42
Type	e-circRNA
Identification method	find_circ
Parent gene	BGIOSGA009544
Parent gene annotation	NA
Parent gene strand	-
Alternative splicing	BGIOSGA009544_circ_g.1 BGIOSGA009544_circ_g.2
Support reads	NA
Tissues	leaf
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	BGIOSGA009544-TA:9

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							ACGGAAGGATGATGGACGACCACGAGAACTCCTTCCCGGCCGCGCCATCTCCGGCGCCACCGCT
GGAGGGCGCCTCGCCGCCCTGCGCATGTGTCCGCACtattccaccaatgcctcctataagtagt
ggacgccttccaagatcgtcaactttaaatactgcaacacctgtcatcaacaactgcaaataat
agaaatat

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							TATTCCACCAATGCCTCCTATAAGTAGTGGACGCCTTCCAAGATCGTCAACTTTAAATACTGCA
ACACCTGTCATCAACAACTGCAAATAATAGAAATATTACACAGAGGTTCAAAAAAAAGTGTAAG
CTCTATACCTTTCCACCTACCATCTGGATAACAAAATAGATATCTAATTCTCCCTATATATATA
CTAGATTATAAAAATAATTTAGCTTCATAGAATTACCTTGAACAACCCAATCAAAATTGATACT
TTGGCAGCATCAGATGCAGCTGCAAACCCAGCAGTCTGTTGAAGATAGAATGGATTTAATTGTA
TGTATCAGGGCACACAGCCATATGGAGAACTAAGTCTTATTCTGTCTGTCCTTGTATGAAAAGA
AACTCAGAGGTACCTGAAGAATGGAAGTTGCATAGTATAGAACACTTGGCTGGCCTGTTATCTG
AAATAATAGTTTAATTAATATCAGTGCTTTAGTTCCATATAACAAAGAAGTAACATTAGTCAAC
TATTAAAAAATCAAGAAATGACCAAAGCAGGATGAAATGAATAGACAGGTCATTATCTTTCTTC
TTTTTCTACCTCAACTTGGACATAATAACTTTCACTGAAATTTAGGGCACATAATTTCAAATTT
AAAAGGATGATCAAAGCACGGTCAGATTTCATATTTAGATGTGTTGCTTCCAAGTGGGCTGATG
AGGACAAAAACCTGCTGGAAGAGAACCAGTCCTCCTCCAATGATGAGTGCCTTCAAGCTAGCTC
CCTCAAACATCTTCCAAATGTTCCCTTCAGATTCTTGTTCTGCATAAGCAGCCTTAATAGAGAG
AAGGGTATCATCAATCTCATCTGCTAAGACCCTGTCACTCCTAAAGCGCCCCCTCAGTGATCTC
AATGCCTGAATTGCCTTCTTTTTGTTATCTTCCACTGACGCCTTTCCTTGAACTGCCCTGAGAA
GAAGCCATCTTGGTGAAGGCGGTAAATTCCACATACCAATAGCCATTATTACTGCCAGTGGAGC
ACCAAAACCAAACATATAACGCCATCCTCCTACCACATCAATTTCAAGACTCCCTACAAGGTAT
CCAGTCTGCAAAATATTGTATTAATAGTCAACTAGTAAAGTACACCCTCCGTCCCAGAAGAAAA
CCCACTTCTGGGTTTTGAATCTGGACATAGGCTATGTCCAGATTCAAACCCAGTAGTTTTTTTT
TTTTTTTTTTTTTGGGGGGGGGGGGGGGAGGGGGACAGAGGGAGTAGTCAGCAGGGGATAGATG
GGTATACTGAAAAGTGTGTAGCAGTTGGAAGAGAGATATACCAGTATTCCTAATACAATAAACA
ACTCCTTTAAAGATATCAATGTCCCACGTATTCGCGAAGGAGAAGTCTCTGCAATATAAAGAGG
TGCACCGTGCATCGCCTGGCACAAAGCATGGTGATTCAGTGATGTTACATAACCCCATGATGTA
ATATACATGGACACAACAATGATTCATGATCTCCAAACCTTTAGTTTGATATGAATATGTTCAT
TTGCATTTATGTTCCTCTTCAGTTATTATTAACACCTTTCTAACAAAGCATCGGCAGTTTAGAT
ATTTGCGGATTTTTTTAGTTGGCAGTAAACAAATAAACTGTTTGTAGTATTAACTAGAAAAAAT
GCCCGTGCGTTGCAACGGGTAAAAGCGTTTTTTTATACAACATCTATTAGAAGTTGAACAATAA
ATTAAAATATTGAAATCACTATACATTATAATGCAAAAGGTTCACTAAAATCATTCCTTCCTTA
TAAGCCCCAGCTCAGTCTGCTGCCTCTATATATCTCTGCTCGGCTCGGCTCTCTTCGACCCAGC
CCACAAATGGAGCCACAGGCTCAGATAGCATAGTCATATATCTTCTCTCGTTGCCAAGCCAAAC
CCACGCGCTTTAGTAGCATCTTCAACCTCCGGGAGACAGTCCCATATCTATACAATACCGAAGC
TGATCATCATATCAAATCCGGCCAAATCTTTCTCGATCTCCCAAAATTAGTTGAGGTTTTTTTA
CCCACACGATATTTTCTTTCCGTTTCCCTCAAAATCGGAGTGATTCACAAAACTTGGGATAAAA
AGGTCAGGGGAAGCTCGGAAGCTCGCCAGTTGGCCATCATTCGTGTGCAGCGGATTGGTATGGA
CAGCGTACGAAAAGAAATATGCGGAATCCTTGTGTATCTTTTATTAGAAATTCTTCCTCCCCCA
ACCCGAGCTGAGACCACCGAGAAATATGCGTGTAAAGATTATTTGATGTCTGTGTTGATAATGT
TTGGTTAAATTTATTGGGTCTGATTAGTAAAATTATCCCATTATTGTAATAATTTATGTTAGAT
GGTATTATTTTCTATCTCTTCCACTTATACGTGGTGTTCATTATTTTTGGTATATACAAATTTT
TTCCATGGTTTTACCAGCTGGCTTAGGCTGTTTTCCTCATCTTTTTCCCCAACGCCACAAACCA
GGTCGGGCCTTCTTCAAGGCCCAGGTCAGGCCTTCTTTTTGGCGTGACCGTGTTTGGGCTTCTA
ACTTAAATTTGTTAATTTGGTTAACAGAAACAGGACTTCGCTAATTGTGCGGGGATAAAAGAGT
CTCTCGGACGTGGGTTTTGACGGACGAAATTTTTACCGGAAGCTTTATGTATTTTTTAATTAGG
TATAGATATCTGCCGCAACACTGAGTAACAACAATGTCCAAAGTTCATATGAAAAGACCTTGTC
CCAAATGATGGATTTCAACTACAAGCATTCACAATATTGCCATATCTGGAAGGATCAAACGCGT
TCATGGTTCCTTTCCACTTATTTTATAATTAATTCCACCAAAATGTGGTCATCAAGCTACACTG
ATACTAAATCTGGAAGTAATGAGTCATTTGCAGTCCAAGTATACAGATTATGCAGTTCAGTTTC
CTCTCTTAAAGTTTTCATGTGCTACTCAACTCAAAAAGATATATAACTATTGGTCCTCTGACAT
TCATCTACATGAATTTATACTTTTACTTGTTCAATAACAGTGGCATTGCATTTTGGGGAGAAAA
AAGGTTGCCTCAGAGTTACTCACCAAACCAATACCGATACCATAGAGGAGACGGCCTATGATCA
GAAGTACAAAATCAGGTGCAAATCCAGTGACCAGAGCACCAGAAATATATAAAGCTGCAGCTGT
GACCAGTTCTATTCTTCTTCCTGAACCAAGGATGGTAGTAGTAGACTAGCAGTCAATTTTCTTG
CTAAAGATTATACAGTAAGGAAAAAAAACGAAAAACATTTTTTTTCGAATCACCTAGAAAATCA
GCAACGCGATATGCAAGAAGCGAACCACCAAGAGCACCATAGAGTGAACCGCTTGCCTAAATTG
GATGACAAAAAATCACATTAAAGACAGTAGTGTTCTTGATTGGGAAAACAAAAAGTTTGGTAAG
CATGAAAATATCTAAAAAATTACCACGAGCCCTAGCTGTATAGATGACAGGCTGAACCAAGTGG
TTCCACTGAGTTCAGCAGACTGGAGGAATAAACACCATTAGAGTGAATCAATACATGACAACTA
TAACAGATTGCATAGCCAACCAAAATAGGGACTAACTTGCAGAGATATGCATGCTCCAGAGGTT
GCGCCAATGTCATAACCAAAAAGGAGTCCTCCCAATGCAGGGAACAAGAACCTAGGTTCCAAAC
ATTGACCCACAAGTAGTTAAAGCTTGATATATTTTCCAATTTCCCCTTTATGCTTTTGTTTTTT
TATCCATATTCCAAGCCGTATTAATATAATAACCACCAATGGTTTACATCCAACTATAACATTT
GTCTTCAGTATGTAATCAAAATACTATGCAAACCTATCATCTCCTGAATTATAATATGTTCTTA
TCTAGCATTAAAGCAGAGAAGAGAAGACAGTGCAGAATTATATTGCATCTTACTTACAATGCAT
TGTACAGTCTGCCCTAATTTAACATGATTGTTCTCATCAACACGATGAAACAAGCAATATCTAC
TGAACAGTTAAAAAGCATTCTCTCTCCCTTGAATTGAAATTAGGTGCCAATGCTATCCCTCAAC
ATTGGGAAGCTAGAACCAAACTAGAAATGCATTCCTCTTATCACCTATCACTGTCCGATTTTAT
CCCCAAATGTCACTGACCAAAGAGATGGAGAGGGGAGCTATCTTACGGAAGGATGATGGACGAC
CACGAGAACTCCTTCCCGGCCGCGCCATCTCCGGCGCCACCGCTGGAGGGCGCCTCGCCGCCCT
GCGCATGTGTCCGCAC
						
					

			
		

Sequences
Splice junction sequence	ACGGAAGGATGATGGACGACCACGAGAACTCCTTCCCGGCCGCGCCATCTCCGGCGCCACCGCT GGAGGGCGCCTCGCCGCCCTGCGCATGTGTCCGCACtattccaccaatgcctcctataagtagt ggacgccttccaagatcgtcaactttaaatactgcaacacctgtcatcaacaactgcaaataat agaaatat
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	TATTCCACCAATGCCTCCTATAAGTAGTGGACGCCTTCCAAGATCGTCAACTTTAAATACTGCA ACACCTGTCATCAACAACTGCAAATAATAGAAATATTACACAGAGGTTCAAAAAAAAGTGTAAG CTCTATACCTTTCCACCTACCATCTGGATAACAAAATAGATATCTAATTCTCCCTATATATATA CTAGATTATAAAAATAATTTAGCTTCATAGAATTACCTTGAACAACCCAATCAAAATTGATACT TTGGCAGCATCAGATGCAGCTGCAAACCCAGCAGTCTGTTGAAGATAGAATGGATTTAATTGTA TGTATCAGGGCACACAGCCATATGGAGAACTAAGTCTTATTCTGTCTGTCCTTGTATGAAAAGA AACTCAGAGGTACCTGAAGAATGGAAGTTGCATAGTATAGAACACTTGGCTGGCCTGTTATCTG AAATAATAGTTTAATTAATATCAGTGCTTTAGTTCCATATAACAAAGAAGTAACATTAGTCAAC TATTAAAAAATCAAGAAATGACCAAAGCAGGATGAAATGAATAGACAGGTCATTATCTTTCTTC TTTTTCTACCTCAACTTGGACATAATAACTTTCACTGAAATTTAGGGCACATAATTTCAAATTT AAAAGGATGATCAAAGCACGGTCAGATTTCATATTTAGATGTGTTGCTTCCAAGTGGGCTGATG AGGACAAAAACCTGCTGGAAGAGAACCAGTCCTCCTCCAATGATGAGTGCCTTCAAGCTAGCTC CCTCAAACATCTTCCAAATGTTCCCTTCAGATTCTTGTTCTGCATAAGCAGCCTTAATAGAGAG AAGGGTATCATCAATCTCATCTGCTAAGACCCTGTCACTCCTAAAGCGCCCCCTCAGTGATCTC AATGCCTGAATTGCCTTCTTTTTGTTATCTTCCACTGACGCCTTTCCTTGAACTGCCCTGAGAA GAAGCCATCTTGGTGAAGGCGGTAAATTCCACATACCAATAGCCATTATTACTGCCAGTGGAGC ACCAAAACCAAACATATAACGCCATCCTCCTACCACATCAATTTCAAGACTCCCTACAAGGTAT CCAGTCTGCAAAATATTGTATTAATAGTCAACTAGTAAAGTACACCCTCCGTCCCAGAAGAAAA CCCACTTCTGGGTTTTGAATCTGGACATAGGCTATGTCCAGATTCAAACCCAGTAGTTTTTTTT TTTTTTTTTTTTTGGGGGGGGGGGGGGGAGGGGGACAGAGGGAGTAGTCAGCAGGGGATAGATG GGTATACTGAAAAGTGTGTAGCAGTTGGAAGAGAGATATACCAGTATTCCTAATACAATAAACA ACTCCTTTAAAGATATCAATGTCCCACGTATTCGCGAAGGAGAAGTCTCTGCAATATAAAGAGG TGCACCGTGCATCGCCTGGCACAAAGCATGGTGATTCAGTGATGTTACATAACCCCATGATGTA ATATACATGGACACAACAATGATTCATGATCTCCAAACCTTTAGTTTGATATGAATATGTTCAT TTGCATTTATGTTCCTCTTCAGTTATTATTAACACCTTTCTAACAAAGCATCGGCAGTTTAGAT ATTTGCGGATTTTTTTAGTTGGCAGTAAACAAATAAACTGTTTGTAGTATTAACTAGAAAAAAT GCCCGTGCGTTGCAACGGGTAAAAGCGTTTTTTTATACAACATCTATTAGAAGTTGAACAATAA ATTAAAATATTGAAATCACTATACATTATAATGCAAAAGGTTCACTAAAATCATTCCTTCCTTA TAAGCCCCAGCTCAGTCTGCTGCCTCTATATATCTCTGCTCGGCTCGGCTCTCTTCGACCCAGC CCACAAATGGAGCCACAGGCTCAGATAGCATAGTCATATATCTTCTCTCGTTGCCAAGCCAAAC CCACGCGCTTTAGTAGCATCTTCAACCTCCGGGAGACAGTCCCATATCTATACAATACCGAAGC TGATCATCATATCAAATCCGGCCAAATCTTTCTCGATCTCCCAAAATTAGTTGAGGTTTTTTTA CCCACACGATATTTTCTTTCCGTTTCCCTCAAAATCGGAGTGATTCACAAAACTTGGGATAAAA AGGTCAGGGGAAGCTCGGAAGCTCGCCAGTTGGCCATCATTCGTGTGCAGCGGATTGGTATGGA CAGCGTACGAAAAGAAATATGCGGAATCCTTGTGTATCTTTTATTAGAAATTCTTCCTCCCCCA ACCCGAGCTGAGACCACCGAGAAATATGCGTGTAAAGATTATTTGATGTCTGTGTTGATAATGT TTGGTTAAATTTATTGGGTCTGATTAGTAAAATTATCCCATTATTGTAATAATTTATGTTAGAT GGTATTATTTTCTATCTCTTCCACTTATACGTGGTGTTCATTATTTTTGGTATATACAAATTTT TTCCATGGTTTTACCAGCTGGCTTAGGCTGTTTTCCTCATCTTTTTCCCCAACGCCACAAACCA GGTCGGGCCTTCTTCAAGGCCCAGGTCAGGCCTTCTTTTTGGCGTGACCGTGTTTGGGCTTCTA ACTTAAATTTGTTAATTTGGTTAACAGAAACAGGACTTCGCTAATTGTGCGGGGATAAAAGAGT CTCTCGGACGTGGGTTTTGACGGACGAAATTTTTACCGGAAGCTTTATGTATTTTTTAATTAGG TATAGATATCTGCCGCAACACTGAGTAACAACAATGTCCAAAGTTCATATGAAAAGACCTTGTC CCAAATGATGGATTTCAACTACAAGCATTCACAATATTGCCATATCTGGAAGGATCAAACGCGT TCATGGTTCCTTTCCACTTATTTTATAATTAATTCCACCAAAATGTGGTCATCAAGCTACACTG ATACTAAATCTGGAAGTAATGAGTCATTTGCAGTCCAAGTATACAGATTATGCAGTTCAGTTTC CTCTCTTAAAGTTTTCATGTGCTACTCAACTCAAAAAGATATATAACTATTGGTCCTCTGACAT TCATCTACATGAATTTATACTTTTACTTGTTCAATAACAGTGGCATTGCATTTTGGGGAGAAAA AAGGTTGCCTCAGAGTTACTCACCAAACCAATACCGATACCATAGAGGAGACGGCCTATGATCA GAAGTACAAAATCAGGTGCAAATCCAGTGACCAGAGCACCAGAAATATATAAAGCTGCAGCTGT GACCAGTTCTATTCTTCTTCCTGAACCAAGGATGGTAGTAGTAGACTAGCAGTCAATTTTCTTG CTAAAGATTATACAGTAAGGAAAAAAAACGAAAAACATTTTTTTTCGAATCACCTAGAAAATCA GCAACGCGATATGCAAGAAGCGAACCACCAAGAGCACCATAGAGTGAACCGCTTGCCTAAATTG GATGACAAAAAATCACATTAAAGACAGTAGTGTTCTTGATTGGGAAAACAAAAAGTTTGGTAAG CATGAAAATATCTAAAAAATTACCACGAGCCCTAGCTGTATAGATGACAGGCTGAACCAAGTGG TTCCACTGAGTTCAGCAGACTGGAGGAATAAACACCATTAGAGTGAATCAATACATGACAACTA TAACAGATTGCATAGCCAACCAAAATAGGGACTAACTTGCAGAGATATGCATGCTCCAGAGGTT GCGCCAATGTCATAACCAAAAAGGAGTCCTCCCAATGCAGGGAACAAGAACCTAGGTTCCAAAC ATTGACCCACAAGTAGTTAAAGCTTGATATATTTTCCAATTTCCCCTTTATGCTTTTGTTTTTT TATCCATATTCCAAGCCGTATTAATATAATAACCACCAATGGTTTACATCCAACTATAACATTT GTCTTCAGTATGTAATCAAAATACTATGCAAACCTATCATCTCCTGAATTATAATATGTTCTTA TCTAGCATTAAAGCAGAGAAGAGAAGACAGTGCAGAATTATATTGCATCTTACTTACAATGCAT TGTACAGTCTGCCCTAATTTAACATGATTGTTCTCATCAACACGATGAAACAAGCAATATCTAC TGAACAGTTAAAAAGCATTCTCTCTCCCTTGAATTGAAATTAGGTGCCAATGCTATCCCTCAAC ATTGGGAAGCTAGAACCAAACTAGAAATGCATTCCTCTTATCACCTATCACTGTCCGATTTTAT CCCCAAATGTCACTGACCAAAGAGATGGAGAGGGGAGCTATCTTACGGAAGGATGATGGACGAC CACGAGAACTCCTTCCCGGCCGCGCCATCTCCGGCGCCACCGCTGGAGGGCGCCTCGCCGCCCT GCGCATGTGTCCGCAC

			
						 Conservation Information
					
						Conserved circRNAs
						
							osa_circ_022504* 						
					
						PMCS

Conservation Information
Conserved circRNAs	osa_circ_022504*
PMCS

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							38911501-38911410(-)
38911391-38907229(+)
38911419-38907603(+)
						
						Potential amino acid sequence
						
							MRRAARRPPAVAPEMARPGRSSRGRPSSFRKIAPLSISLSAELSGTTWFSLSSIQLGLVASGSL
YGALGGSLLAYRVADFLGRRIELVTAAALYISGALVTGFAPDFVLLIIGRLLYGIGIGLAMHGA
PLYIAETSPSRIRGTLISLKELFIVLGILTGYLVGSLEIDVVGGWRYMFGFGAPLAVIMAIGMW
NLPPSPRWLLLRAVQGKASVEDNKKKAIQALRSLRGRFRSDRVLADEIDDTLLSIKAAYAEQES
EGNIWKMFEGASLKALIIGGGLVLFQQITGQPSVLYYATSILQTAGFAAASDAAKVSILIGLFK
LLMTGVAVFKVDDLGRRPLLIGGIGGIVRTHAQGGEAPSSGGAGDGAAGKEFSWSSIILP*(-)
MERGAILRKDDGRPRELLPGRAISGATAGGRLAALRMCPHYSTNASYK*(+)
MMDDHENSFPAAPSPAPPLEGASPPCACVRTIPPMPPISSGRLPRSSTLNTATPVINNLNNPIK
IDTLAASDAAANPAV*(+)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	38911501-38911410(-) 38911391-38907229(+) 38911419-38907603(+)
Potential amino acid sequence	MRRAARRPPAVAPEMARPGRSSRGRPSSFRKIAPLSISLSAELSGTTWFSLSSIQLGLVASGSL YGALGGSLLAYRVADFLGRRIELVTAAALYISGALVTGFAPDFVLLIIGRLLYGIGIGLAMHGA PLYIAETSPSRIRGTLISLKELFIVLGILTGYLVGSLEIDVVGGWRYMFGFGAPLAVIMAIGMW NLPPSPRWLLLRAVQGKASVEDNKKKAIQALRSLRGRFRSDRVLADEIDDTLLSIKAAYAEQES EGNIWKMFEGASLKALIIGGGLVLFQQITGQPSVLYYATSILQTAGFAAASDAAKVSILIGLFK LLMTGVAVFKVDDLGRRPLLIGGIGGIVRTHAQGGEAPSSGGAGDGAAGKEFSWSSIILP(-) MERGAILRKDDGRPRELLPGRAISGATAGGRLAALRMCPHYSTNASYK(+) MMDDHENSFPAAPSPAPPLEGASPPCACVRTIPPMPPISSGRLPRSSTLNTATPVINNLNNPIK IDTLAASDAAANPAV*(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Huang et al., 2021

circRNA

Detail information of BGIOSGA009544_circ_g.3

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