Detail information of AT2G07360_circ_g.18


General Information
CircRNA Name AT2G07360_circ_g.18
ID in PlantcircBase ath_circ_013033
Alias NA
Organism Arabidpsis thaliana
Position chr2: 3056432-3056491  JBrowse»
Reference genome TAIR10.38
Type   e-circRNA
Identification method PcircRNA_finder
Parent gene AT2G07360
Parent gene annotation SH3 domain-containing protein
Parent gene strand -
Alternative splicing AT2G07360_circ_g.17
Support reads 2
Tissues leaf
Exon boundary   Yes-Yes
Splicing signals   CT-AC
Number of exons covered AT2G07360.2:1
AT2G07360.1:1
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   GCTCCTTGCAAGTTGCGAATAGGAAACCGGctgatccaaagtggcagctaattcatgaat
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence CTGATCCAAAGTGGCAGCTAATTCATGAATGCTCCTTGCAAGTTGCGAATAGGAAACCGG
Conservation Information
Conserved circRNAs NA
PMCS 0.155557083
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Chu et al., 2017