Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d043075_circ_g.2 |
ID in PlantcircBase | zma_circ_000564 |
Alias | circ119, circ1762, zma_circ_001467, Zm00001d043075_circ_g.3 |
Organism | Zea mays |
Position | chr3: 188442656-188443191 JBrowse» |
Reference genome | AGPv4.38 |
Type | ui-circRNA |
Identification method | CIRI, CIRCexplor2 |
Parent gene | Zm00001d043075 |
Parent gene annotation |
Leucine-rich repeat protein kinase family protein |
Parent gene strand | + |
Alternative splicing | Zm00001d043075_circ_g.1 |
Support reads | 6 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | GT-CA |
Number of exons covered | Zm00001d043075_T007:2 Zm00001d043075_T003:2 Zm00001d043075_T028:2 Zm00001d043075_T012:2 Zm00001d043075_T006:2 Zm00001d043075_T016:2 Zm00001d043075_T004:2 Zm00001d043075_T026:2 Zm00001d043075_T017:2 Zm00001d043075_T009:2 Zm00001d043075_T002:2 Zm00001d043075_T008:2 Zm00001d043075_T014:2 Zm00001d043075_T020:2 Zm00001d043075_T019:2 Zm00001d043075_T011:2 Zm00001d043075_T010:2 Zm00001d043075_T018:2 Zm00001d043075_T005:2 Zm00001d043075_T013:2 Zm00001d043075_T001:2 Zm00001d043075_T015:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.048195989 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |