Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G06430_circ_g.1 |
ID in PlantcircBase | ath_circ_000983 |
Alias | 1:1960655-1960895 |
Organism | Arabidpsis thaliana |
Position | chr1: 1960655-1960895 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | find_circ; CIRI2 |
Parent gene | AT1G06430 |
Parent gene annotation |
ATP-dependent zinc metalloprotease FTSH 8, chloroplastic |
Parent gene strand | - |
Alternative splicing | NA |
Support reads | 2/1/1 |
Tissues | seedling;root;leaf |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT1G06430.2:1 AT1G06430.3:1 AT1G06430.1:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.699659168 |
Functional Information | |
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Coding potential | NA |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Philips et al., 2020 |