Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d045725_circ_g.1 |
ID in PlantcircBase | zma_circ_009915 |
Alias | Zm09circ00025, zma_circ_0002920 |
Organism | Zea mays |
Position | chr9: 35220982-35233192 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | CIRI2, find_circ |
Parent gene | Zm00001d045725 |
Parent gene annotation |
ARM repeat superfamily protein |
Parent gene strand | - |
Alternative splicing | Zm00001d045725_circ_igg.1 Zm00001d045725_circ_igg.2 |
Support reads | NA |
Tissues | leaf, endosperm, root |
Exon boundary | Yes-No |
Splicing signals | CT-AC |
Number of exons covered | Zm00001d045725_T002:16 Zm00001d045725_T022:15 Zm00001d045725_T023:16 Zm00001d045725_T010:16 Zm00001d045725_T019:16 Zm00001d045725_T039:16 Zm00001d045725_T037:7 Zm00001d045725_T028:16 Zm00001d045725_T004:4 Zm00001d045725_T006:16 Zm00001d045725_T035:16 Zm00001d045725_T027:15 Zm00001d045725_T014:16 Zm00001d045725_T031:16 Zm00001d045725_T030:17 Zm00001d045725_T008:4 Zm00001d045725_T024:16 Zm00001d045725_T032:16 Zm00001d045725_T017:16 Zm00001d045725_T012:4 Zm00001d045725_T001:16 Zm00001d045725_T015:16 Zm00001d045725_T003:16 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.095671176 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Han et al., 2020; Ma et al., 2021b |