Plant Circular RNA Database

Detail information of Zm00001d030340_circ_g.4

			
						 General Information
					
						CircRNA Name
						Zm00001d030340_circ_g.4
					
						ID in PlantcircBase
						zma_circ_006621
					
						Alias
						Zm01circ00099
					
						Organism
						
							Zea mays						
					
						Position
						
							chr1: 123405968-123410769  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						CIRI2
					
						Parent gene
						
							Zm00001d030340						
					
						Parent gene annotation
						
							protein_coding
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Zm00001d030340_circ_g.1 Zm00001d030340_circ_g.2 Zm00001d030340_circ_g.3 						
					
						Support reads
						NA
					
						Tissues
						leaf, endosperm
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-GC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d030340_T030:5
Zm00001d030340_T060:5
Zm00001d030340_T026:5
Zm00001d030340_T057:5
Zm00001d030340_T049:5
Zm00001d030340_T059:5
Zm00001d030340_T021:4
Zm00001d030340_T037:5
Zm00001d030340_T040:5
Zm00001d030340_T014:3
Zm00001d030340_T051:5
Zm00001d030340_T050:5
Zm00001d030340_T034:4
Zm00001d030340_T006:5
Zm00001d030340_T010:5
Zm00001d030340_T046:5
Zm00001d030340_T013:5
Zm00001d030340_T003:5
Zm00001d030340_T009:5
Zm00001d030340_T041:5
Zm00001d030340_T054:5
Zm00001d030340_T023:5
Zm00001d030340_T048:6
Zm00001d030340_T001:5
Zm00001d030340_T043:5
Zm00001d030340_T002:5
Zm00001d030340_T015:5
Zm00001d030340_T053:4
Zm00001d030340_T007:5
Zm00001d030340_T028:5
Zm00001d030340_T039:5
Zm00001d030340_T005:5
Zm00001d030340_T033:4

General Information
CircRNA Name	Zm00001d030340_circ_g.4
ID in PlantcircBase	zma_circ_006621
Alias	Zm01circ00099
Organism	Zea mays
Position	chr1: 123405968-123410769 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	CIRI2
Parent gene	Zm00001d030340
Parent gene annotation	protein_coding
Parent gene strand	-
Alternative splicing	Zm00001d030340_circ_g.1 Zm00001d030340_circ_g.2 Zm00001d030340_circ_g.3
Support reads	NA
Tissues	leaf, endosperm
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-GC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d030340_T030:5 Zm00001d030340_T060:5 Zm00001d030340_T026:5 Zm00001d030340_T057:5 Zm00001d030340_T049:5 Zm00001d030340_T059:5 Zm00001d030340_T021:4 Zm00001d030340_T037:5 Zm00001d030340_T040:5 Zm00001d030340_T014:3 Zm00001d030340_T051:5 Zm00001d030340_T050:5 Zm00001d030340_T034:4 Zm00001d030340_T006:5 Zm00001d030340_T010:5 Zm00001d030340_T046:5 Zm00001d030340_T013:5 Zm00001d030340_T003:5 Zm00001d030340_T009:5 Zm00001d030340_T041:5 Zm00001d030340_T054:5 Zm00001d030340_T023:5 Zm00001d030340_T048:6 Zm00001d030340_T001:5 Zm00001d030340_T043:5 Zm00001d030340_T002:5 Zm00001d030340_T015:5 Zm00001d030340_T053:4 Zm00001d030340_T007:5 Zm00001d030340_T028:5 Zm00001d030340_T039:5 Zm00001d030340_T005:5 Zm00001d030340_T033:4

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GATAAAGTAGACCTATGATATCACATGCCTTCTTGTAATTGCATGAATGGAGCTCTTGCGCCAG
AGTTATGAGCAAAAAGGATACCCCAGAATGCGGGAActgaagatgtaagcgaagaacaatctcc
atttccttcataggcagcaaaaagcattctagctagggcaccagaaagtaaccaatcactgcag
aggtaata

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 475
Transcript exons: 123405968-123406053,123406273-123406344,123410168-123410
278,123410350-123410435,123410650-123410769
CTGAAGATGTAAGCGAAGAACAATCTCCATTTCCTTCATAGGCAGCAAAAAGCATTCTAGCTAG
GGCACCAGAAAGTAACCAATCACTTGATGGACTACTTAATTGTGAAGTGAAGATGTTGCACTCG
AACGCCGCATCAAACACGTGATATGGAGCGCATTTCATCATTTCTGCTAGTAGACCAAAGGTTT
TGGACAATATGTCAGCATTATTAACATCTCGCACATATTTGAAAATGGAATTGCAAAATACCTT
AGCAATATCAATCCTGACATGCTTTTCAATTTGTCCTAAGTTATTTGATGTTTGAACAGCCAGT
GACTTGTCAACATGCATCAAAGCGAAGCACAGGTCCTTATTTGACGACACCATCCGATAAAGTA
GACCTATGATATCACATGCCTTCTTGTAATTGCATGAATGGAGCTCTTGCGCCAGAGTTATGAG
CAAAAAGGATACCCCAGAATGCGGGAA
						
					

						Genomic sequence
						
							CTGAAGATGTAAGCGAAGAACAATCTCCATTTCCTTCATAGGCAGCAAAAAGCATTCTAGCTAG
GGCACCAGAAAGTAACCAATCACTGCAGAGGTAATAGCAGCAGTCATATTATAGAAGTACACTT
TCAAGAATCAAAACAAAAATTACAGAAACATACAGCAAAGGTATTTCTGATTTACCATGATCAA
TTACACACCAAACAATTCAAAAAAAACAAGGGCAGACATAGTGCCAGAGGCCCCCACATGAGTG
GGATCTAAAAAACACCAAATAATTCAAAGAGAATGAAAATAAAAAGTACCTTGATGGACTACTT
AATTGTGAAGTGAAGATGTTGCACTCGAACGCCGCATCAAACACGTGATATGGAGCGCTAAATA
GACACAGTAACAGCTCATTAATTAAAAGTTTTACAAAAAGTACAGTTTCACTAGACAGGATCTT
TTACAATGTGAGTCTAAAAGTAATTTCATAGCAATTGCTTGAGTTCCTACCTAAGCATCAGTTA
TGGCATGTTATAACTCATAAATATACAAATTACTTAACATGAATAGAACCCAAAAGAATGACGT
CAAATATTTGAATTTCAAAAATAACAAAAAAATGCCATTTGGACCACACAAAGGAAAAAAGTGA
TTATTTGGCTATTTGTCAAATGTTACGACAAACTTTAAGTGTTTATCAGTACTCACATGACAAA
GTTGCAGACAAGTTGCCAAGATGGCAAGTGTCCCCCATGAACACAGCTGGACATATCATTTGGG
TAGGTTGCATCTTGTCAGCAATATCTATTTATGTGTTCATTGCTATTAAGATGCAGAAGTGGTT
CATCAAGGCCATGAACAAACTTTGGCATGTGTATTTATGTTCAGGCCATAAACAAGTAAATGGT
GGCAATTGCCTGGTTTCGTAGAACAAAGTGCACCGGACGCTTCAGTATGGTGGGCTGGGAATTC
TCAGCGTTGATATATGAGCTTTCCACTGCAAATAAGGTGGTTCTGGCTTGCAAAGACAAATAAG
GAGACCTTGGTCAGGCCTAGAGGTGTCGGTCCACGAAAATGTAAAAGCTCTTTGTCATTGCTTT
ACGATCTCATGTTGGCAACAGAAATGAGACGTATTTTTGGACACCATGCTCTAGCTCCTTGCAA
CTTCATGCCGATTGTGATATGACTTCGGCTAGTGATTCCTTAGGTCGTCAGTCTCTTTCTGCCT
ATTGTGTTTTTCTTAGTGGTTCCCTCATTGCTTGAAAGACTAAGAAGTAGGTAGCAGTTTCTCG
TTCGAGTACAGAGGCTGAGTTGCGTGCTATGGCTCTTGCGACGTTAGAGGTGACTTGGCTACGG
TAGTTGCTTACTGGTTTTGGTGTATCTGTATCTATATCAACTCTTTTGTCTAACAGTACTGGTG
CTATTAGTATTGCTCGTGATCTGGTAAAGCATAAGCTTACTAAGCATATTAGTGTTGATGCTTC
TTATACACGAACACAGGTTTAGGATGATGTCATTAATCTTAGCTATGTGTCTTCAGAGCTTCAG
TTGGCTGATTTCTTCACCAAGGCACAAACCAGAGCTCGGCATCGTTTCTATCTCTCCAAACTCA
GTGTAGTTGATCCACCTTGAGTTTGAGGGGGTGTCAGATGTATATAGATGCATATTTATGTTTT
CCACATTAGTGCATATTTACCCTCATGTACTGGTGTATATATACTGTCCTTAGGCCTCATATTG
AATACAAGTGCTATTCATTCCAGTGGTGTCTTACGAGAGCATGGAAGCTTGATGCCTTATGTCC
AGCTCTAGCGACAGGGTAGGTACTAGGTAGGCTGTTAGAGCATTGGTTAGGTCTCACCTAGAGT
GTGTGTTTTTATCGATTAGAAAAACTATGTATCAGGACCCTTCTACAGCTTGGTCGGTATAATT
GTAAAAAACCGTTTTTTCCTCTTAACAACGATATGCAACTCTCCTGCATATTCGGGAAAAAAAG
CACTCCCACTTTTCCCTTGTAAGTTTGTATTGAAAGCATAGCAGATTCAGACATTCGGTATAAT
GCATTATTTGCATTAAGCCTCTCGGGTGGTATAGAGTACAAATACTTGGACAGATGCCTCCCTG
GATACATATGGCAAAATCGAATTACAAGTTTACAACCCTAAACTAACAAATATGCAATATACTC
TAACATCCCCCAGCAGGTATAGTGAGAAACAGTCATAGTGAGAACATTGTGGGTGGTCAAATTG
GAGAAGAAAGTGAAGACTAACACCTCGTGCAGTCATAACAAGGTCGCATTACAAATGTACTGAA
TGGAGTAGAAAACTAGAAACTGACGAGTAGCTCATGTGGATGGTAGCCCTTTTTGTCCTCGAGG
TAGCCGAGGTCAAAGTGGACATGGTCAAAGCCATAGAGGACAGAGCTGGTCTGAAGCGTCAACA
GAGGCACACAAGTACACAATCACTAGTTTCCGGCAGATGGCTGCAATAGGACAATGACTTGATC
GAATGGTGAAGGTAGACAAGGCTCTTCAGACGTATCAAAAAGTGTGCACGCATCATCCATTAGC
AACACCAGCAGTGATTTCCAGTACACGTAGCTGCTCGAACATATCAACAAGTGCTCACGCATCA
TCTGTTAGCAACACCAGTGGTGATGTCCAGTAGATGAGGCTGGTGAGGCTGCTCGGACATATCA
ACAAGTGTTCACGCATGACGCATCATCTGTTAGCAACACCAGCAGCGATGTCCATGAGGTGCAG
TAGAGACTTGGATCAAGGGCTGGTGCGACAAAGAGGACCAAGGGTGGCACCAGCCTGGATAAGT
GGCAGCTATGAAGGTAGCTTGACCACGAGCAATGACATTGCTGCCTGGGAGGGTATGTGATAAA
AAACCTCGTCCTTGGGAGAGCCAGCGACTGAATAACGATGAAGGGATTGGCAAACAAAACATTG
GGGAAAAACAGCAACATCTCAACGCAATGGCGTTGCTACATTTCTCCTGTGTTTTCGAGAGAAA
AAACACAGTGCAACCCAACTGGCAGTGCAGGAGAACAAGGCATGACCCAGATGGTAGCACCTCC
ACGATGAAACAGGTCGCAAGATGGTCACAGGGCCCATGGTATATCAGCATGACGATGTGGAAGG
AAGGACACTTGAACCACCAACCCATGCTGCGGATCAACTAGATTGGCCCAATATGGTGCTGCCC
CCAGCAGAGATCAATATCCCCAGGGCCGGCACAGCAGTGTTTTTTTATAGAACGCGCAGGAGAA
AGGCACAGCAGTGTTAGCCTTAGGGTTCGGGAAAAAAACTGAAACTGTGACCTCATGCTCTGGA
TCAACTAGATTGGCCCAATACTGTCCCCGGCAGAGATCAATCTCCCCAGGGGCAGCACAGCAGT
GTTAGCCTTAGGGTTTGGGAACAAAACCTAAATTCATGATACTAAGAAAGCATAGTAGATTGGA
CATAATGCATGGGATACATATATTTAGAGGGCAAGACACTGCCCTACATACATATGCCATATTA
CAATCCAAAACTACCAAACACACTCTACCAGATATGAATACACATTGCTTGTGTGTTCCAGAAA
AATTATGAATAAGCACAAGTCATGTTAATAAACCATAACTGGATTCAAAGTATGTGTTCTTCAA
GCAATAAATGCATTTACTATGTACAAACAGTGTTAGCCTCGGAAGGCAGTGAATGCATTTAAAA
TCGTGTTTGATTTGTTCATTTTAACATTCTACTATACATGATTAACATTCTACTATATATGATT
CAATTGTTTGGTCATTACAATCCAAGCAATGTTTATAAACATAGCCACCAAATTAACAAACATA
CTTTTCTCCCAATTCAAAAAATGGTGCACCATGTCCCAAAATAACTGCACTTCAACCATTTAAA
ATATGTCCAAAAATAAGTGTACAACTAGCTATGAACTAACTAACTTTAGTAGCCTTTTTGTAGC
AACAAAAGGTTCAGTTTATAAATTTTCCATGTGTCACCAAAACAATCACCTAATTATCGTGAAT
GTAGGGAAAAAAATGTTTCTCCGAATTCAGTAAAATTTTGCAAATCTCACCCAGACAGACAATA
GTCCAAAGTCTTGGCCGGCAAGCACGGTACAAAACAAATGTACAGCTTCATTACAGAAGTTCAT
AGTCACTTCAGTTTTAGGAACAACCTAAGAGAGGACTTACCATTTCATCATTTCTGCTAGTAGA
CCAAAGGTTTTGGACAATATGTCAGCATTATTAACATCTCGCACATATTTGAAAATGGAATTGC
AAAATACCTTAGCAATATCAATCCTGAAAAGAAACAAAGAATATAATGTCCAAACTCCAAAGTA
CTAAACTGAAGCTGAGTATATGTTTAAAACCTGACATGCTTTTCAATTTGTCCTAAGTTATTTG
ATGTTTGAACAGCCAGTGACTTGTCAACATGCATCAAAGCGAAGCACAGGTCCTATATATTCAA
GTTTCAAAACAATACAACAGACTTAGGTTCGAACAGCATAAAAACTGCATAATCTTCAATGCAA
GAAAAGCAATAGGAACAAACGAAGACTGAGTGTGTGTCATGGTCTTTCTAATATAAACACAGTG
AATTGATATAGCCATTAGGTGCACCAAAACAGCCTAGCAACTCATGATGTAGGCATAGAACAAA
GTGGCAGTACCTTATTTGACGACACCATCCGATAAAGTAGACCTATGATATCACATGCCTTCTT
GTAATTGCATGAATGGAGCTCTTGCGCCAGAGTTATGAGCAAAAAGGATACCCCAGAATGCGGG
AA
						
					

			
		

Sequences
Splice junction sequence	GATAAAGTAGACCTATGATATCACATGCCTTCTTGTAATTGCATGAATGGAGCTCTTGCGCCAG AGTTATGAGCAAAAAGGATACCCCAGAATGCGGGAActgaagatgtaagcgaagaacaatctcc atttccttcataggcagcaaaaagcattctagctagggcaccagaaagtaaccaatcactgcag aggtaata
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 475 Transcript exons: 123405968-123406053,123406273-123406344,123410168-123410 278,123410350-123410435,123410650-123410769 CTGAAGATGTAAGCGAAGAACAATCTCCATTTCCTTCATAGGCAGCAAAAAGCATTCTAGCTAG GGCACCAGAAAGTAACCAATCACTTGATGGACTACTTAATTGTGAAGTGAAGATGTTGCACTCG AACGCCGCATCAAACACGTGATATGGAGCGCATTTCATCATTTCTGCTAGTAGACCAAAGGTTT TGGACAATATGTCAGCATTATTAACATCTCGCACATATTTGAAAATGGAATTGCAAAATACCTT AGCAATATCAATCCTGACATGCTTTTCAATTTGTCCTAAGTTATTTGATGTTTGAACAGCCAGT GACTTGTCAACATGCATCAAAGCGAAGCACAGGTCCTTATTTGACGACACCATCCGATAAAGTA GACCTATGATATCACATGCCTTCTTGTAATTGCATGAATGGAGCTCTTGCGCCAGAGTTATGAG CAAAAAGGATACCCCAGAATGCGGGAA
Genomic sequence	CTGAAGATGTAAGCGAAGAACAATCTCCATTTCCTTCATAGGCAGCAAAAAGCATTCTAGCTAG GGCACCAGAAAGTAACCAATCACTGCAGAGGTAATAGCAGCAGTCATATTATAGAAGTACACTT TCAAGAATCAAAACAAAAATTACAGAAACATACAGCAAAGGTATTTCTGATTTACCATGATCAA TTACACACCAAACAATTCAAAAAAAACAAGGGCAGACATAGTGCCAGAGGCCCCCACATGAGTG GGATCTAAAAAACACCAAATAATTCAAAGAGAATGAAAATAAAAAGTACCTTGATGGACTACTT AATTGTGAAGTGAAGATGTTGCACTCGAACGCCGCATCAAACACGTGATATGGAGCGCTAAATA GACACAGTAACAGCTCATTAATTAAAAGTTTTACAAAAAGTACAGTTTCACTAGACAGGATCTT TTACAATGTGAGTCTAAAAGTAATTTCATAGCAATTGCTTGAGTTCCTACCTAAGCATCAGTTA TGGCATGTTATAACTCATAAATATACAAATTACTTAACATGAATAGAACCCAAAAGAATGACGT CAAATATTTGAATTTCAAAAATAACAAAAAAATGCCATTTGGACCACACAAAGGAAAAAAGTGA TTATTTGGCTATTTGTCAAATGTTACGACAAACTTTAAGTGTTTATCAGTACTCACATGACAAA GTTGCAGACAAGTTGCCAAGATGGCAAGTGTCCCCCATGAACACAGCTGGACATATCATTTGGG TAGGTTGCATCTTGTCAGCAATATCTATTTATGTGTTCATTGCTATTAAGATGCAGAAGTGGTT CATCAAGGCCATGAACAAACTTTGGCATGTGTATTTATGTTCAGGCCATAAACAAGTAAATGGT GGCAATTGCCTGGTTTCGTAGAACAAAGTGCACCGGACGCTTCAGTATGGTGGGCTGGGAATTC TCAGCGTTGATATATGAGCTTTCCACTGCAAATAAGGTGGTTCTGGCTTGCAAAGACAAATAAG GAGACCTTGGTCAGGCCTAGAGGTGTCGGTCCACGAAAATGTAAAAGCTCTTTGTCATTGCTTT ACGATCTCATGTTGGCAACAGAAATGAGACGTATTTTTGGACACCATGCTCTAGCTCCTTGCAA CTTCATGCCGATTGTGATATGACTTCGGCTAGTGATTCCTTAGGTCGTCAGTCTCTTTCTGCCT ATTGTGTTTTTCTTAGTGGTTCCCTCATTGCTTGAAAGACTAAGAAGTAGGTAGCAGTTTCTCG TTCGAGTACAGAGGCTGAGTTGCGTGCTATGGCTCTTGCGACGTTAGAGGTGACTTGGCTACGG TAGTTGCTTACTGGTTTTGGTGTATCTGTATCTATATCAACTCTTTTGTCTAACAGTACTGGTG CTATTAGTATTGCTCGTGATCTGGTAAAGCATAAGCTTACTAAGCATATTAGTGTTGATGCTTC TTATACACGAACACAGGTTTAGGATGATGTCATTAATCTTAGCTATGTGTCTTCAGAGCTTCAG TTGGCTGATTTCTTCACCAAGGCACAAACCAGAGCTCGGCATCGTTTCTATCTCTCCAAACTCA GTGTAGTTGATCCACCTTGAGTTTGAGGGGGTGTCAGATGTATATAGATGCATATTTATGTTTT CCACATTAGTGCATATTTACCCTCATGTACTGGTGTATATATACTGTCCTTAGGCCTCATATTG AATACAAGTGCTATTCATTCCAGTGGTGTCTTACGAGAGCATGGAAGCTTGATGCCTTATGTCC AGCTCTAGCGACAGGGTAGGTACTAGGTAGGCTGTTAGAGCATTGGTTAGGTCTCACCTAGAGT GTGTGTTTTTATCGATTAGAAAAACTATGTATCAGGACCCTTCTACAGCTTGGTCGGTATAATT GTAAAAAACCGTTTTTTCCTCTTAACAACGATATGCAACTCTCCTGCATATTCGGGAAAAAAAG CACTCCCACTTTTCCCTTGTAAGTTTGTATTGAAAGCATAGCAGATTCAGACATTCGGTATAAT GCATTATTTGCATTAAGCCTCTCGGGTGGTATAGAGTACAAATACTTGGACAGATGCCTCCCTG GATACATATGGCAAAATCGAATTACAAGTTTACAACCCTAAACTAACAAATATGCAATATACTC TAACATCCCCCAGCAGGTATAGTGAGAAACAGTCATAGTGAGAACATTGTGGGTGGTCAAATTG GAGAAGAAAGTGAAGACTAACACCTCGTGCAGTCATAACAAGGTCGCATTACAAATGTACTGAA TGGAGTAGAAAACTAGAAACTGACGAGTAGCTCATGTGGATGGTAGCCCTTTTTGTCCTCGAGG TAGCCGAGGTCAAAGTGGACATGGTCAAAGCCATAGAGGACAGAGCTGGTCTGAAGCGTCAACA GAGGCACACAAGTACACAATCACTAGTTTCCGGCAGATGGCTGCAATAGGACAATGACTTGATC GAATGGTGAAGGTAGACAAGGCTCTTCAGACGTATCAAAAAGTGTGCACGCATCATCCATTAGC AACACCAGCAGTGATTTCCAGTACACGTAGCTGCTCGAACATATCAACAAGTGCTCACGCATCA TCTGTTAGCAACACCAGTGGTGATGTCCAGTAGATGAGGCTGGTGAGGCTGCTCGGACATATCA ACAAGTGTTCACGCATGACGCATCATCTGTTAGCAACACCAGCAGCGATGTCCATGAGGTGCAG TAGAGACTTGGATCAAGGGCTGGTGCGACAAAGAGGACCAAGGGTGGCACCAGCCTGGATAAGT GGCAGCTATGAAGGTAGCTTGACCACGAGCAATGACATTGCTGCCTGGGAGGGTATGTGATAAA AAACCTCGTCCTTGGGAGAGCCAGCGACTGAATAACGATGAAGGGATTGGCAAACAAAACATTG GGGAAAAACAGCAACATCTCAACGCAATGGCGTTGCTACATTTCTCCTGTGTTTTCGAGAGAAA AAACACAGTGCAACCCAACTGGCAGTGCAGGAGAACAAGGCATGACCCAGATGGTAGCACCTCC ACGATGAAACAGGTCGCAAGATGGTCACAGGGCCCATGGTATATCAGCATGACGATGTGGAAGG AAGGACACTTGAACCACCAACCCATGCTGCGGATCAACTAGATTGGCCCAATATGGTGCTGCCC CCAGCAGAGATCAATATCCCCAGGGCCGGCACAGCAGTGTTTTTTTATAGAACGCGCAGGAGAA AGGCACAGCAGTGTTAGCCTTAGGGTTCGGGAAAAAAACTGAAACTGTGACCTCATGCTCTGGA TCAACTAGATTGGCCCAATACTGTCCCCGGCAGAGATCAATCTCCCCAGGGGCAGCACAGCAGT GTTAGCCTTAGGGTTTGGGAACAAAACCTAAATTCATGATACTAAGAAAGCATAGTAGATTGGA CATAATGCATGGGATACATATATTTAGAGGGCAAGACACTGCCCTACATACATATGCCATATTA CAATCCAAAACTACCAAACACACTCTACCAGATATGAATACACATTGCTTGTGTGTTCCAGAAA AATTATGAATAAGCACAAGTCATGTTAATAAACCATAACTGGATTCAAAGTATGTGTTCTTCAA GCAATAAATGCATTTACTATGTACAAACAGTGTTAGCCTCGGAAGGCAGTGAATGCATTTAAAA TCGTGTTTGATTTGTTCATTTTAACATTCTACTATACATGATTAACATTCTACTATATATGATT CAATTGTTTGGTCATTACAATCCAAGCAATGTTTATAAACATAGCCACCAAATTAACAAACATA CTTTTCTCCCAATTCAAAAAATGGTGCACCATGTCCCAAAATAACTGCACTTCAACCATTTAAA ATATGTCCAAAAATAAGTGTACAACTAGCTATGAACTAACTAACTTTAGTAGCCTTTTTGTAGC AACAAAAGGTTCAGTTTATAAATTTTCCATGTGTCACCAAAACAATCACCTAATTATCGTGAAT GTAGGGAAAAAAATGTTTCTCCGAATTCAGTAAAATTTTGCAAATCTCACCCAGACAGACAATA GTCCAAAGTCTTGGCCGGCAAGCACGGTACAAAACAAATGTACAGCTTCATTACAGAAGTTCAT AGTCACTTCAGTTTTAGGAACAACCTAAGAGAGGACTTACCATTTCATCATTTCTGCTAGTAGA CCAAAGGTTTTGGACAATATGTCAGCATTATTAACATCTCGCACATATTTGAAAATGGAATTGC AAAATACCTTAGCAATATCAATCCTGAAAAGAAACAAAGAATATAATGTCCAAACTCCAAAGTA CTAAACTGAAGCTGAGTATATGTTTAAAACCTGACATGCTTTTCAATTTGTCCTAAGTTATTTG ATGTTTGAACAGCCAGTGACTTGTCAACATGCATCAAAGCGAAGCACAGGTCCTATATATTCAA GTTTCAAAACAATACAACAGACTTAGGTTCGAACAGCATAAAAACTGCATAATCTTCAATGCAA GAAAAGCAATAGGAACAAACGAAGACTGAGTGTGTGTCATGGTCTTTCTAATATAAACACAGTG AATTGATATAGCCATTAGGTGCACCAAAACAGCCTAGCAACTCATGATGTAGGCATAGAACAAA GTGGCAGTACCTTATTTGACGACACCATCCGATAAAGTAGACCTATGATATCACATGCCTTCTT GTAATTGCATGAATGGAGCTCTTGCGCCAGAGTTATGAGCAAAAAGGATACCCCAGAATGCGGG AA

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.067338552

Conservation Information
Conserved circRNAs	NA
PMCS	0.067338552

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							123410717-123405976(+)
123410669-123410692(-)
123406008-123410692(-)
						
						Potential amino acid sequence
						
							MELLRQSYEQKGYPRMRELKM*(+)
MVSSNKDLCFALMHVDKSLAVQTSNNLGQIEKHVRIDIAKVFCNSIFKYVRDVNNADILSKTFG
LLAEMMKCAPYHVFDAAFECNIFTSQLSSPSSDWLLSGALARMLFAAYEGNGDCSSLTSSVPAF
WGILFAHNSGARAPFMQLQEGM*(-)
MKEMEIVLRLHLQFPHSGVSFLLITLAQELHSCNYKKACDIIGLLYRMVSSNKDLCFALMHVDK
SLAVQTSNNLGQIEKHVRIDIAKVFCNSIFKYVRDVNNADILSKTFGLLAEMMKCAPYHVFDAA
FECNIFTSQLSSPSSDWLLSGALARMLFAAYEGNGDCSSLTSSVPAFWGILFAHNSGARAPFMQ
LQEGM*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	123410717-123405976(+) 123410669-123410692(-) 123406008-123410692(-)
Potential amino acid sequence	MELLRQSYEQKGYPRMRELKM(+) MVSSNKDLCFALMHVDKSLAVQTSNNLGQIEKHVRIDIAKVFCNSIFKYVRDVNNADILSKTFG LLAEMMKCAPYHVFDAAFECNIFTSQLSSPSSDWLLSGALARMLFAAYEGNGDCSSLTSSVPAF WGILFAHNSGARAPFMQLQEGM(-) MKEMEIVLRLHLQFPHSGVSFLLITLAQELHSCNYKKACDIIGLLYRMVSSNKDLCFALMHVDK SLAVQTSNNLGQIEKHVRIDIAKVFCNSIFKYVRDVNNADILSKTFGLLAEMMKCAPYHVFDAA FECNIFTSQLSSPSSDWLLSGALARMLFAAYEGNGDCSSLTSSVPAFWGILFAHNSGARAPFMQ LQEGM*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Han et al., 2020

circRNA

Detail information of Zm00001d030340_circ_g.4

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