Splice junction sequence |
GTGAATAACATGTTCCCATATCTCCGTGGAATCATTTGTTTCCTCCTCCAAATTCTCGATCAGA AATTTCAAATCTTCATCAGAGACTAGTTTGGATATCcttgcctgattcgccaaccagatctaaa gtaacttacacgtacatacttcctctgttgtggtaccatattgtgatcacattcctaatagtaa ccaaagag
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 422 Transcript exons: 20928728-20928809,20928903-20929031,20929107-20929169,20 929249-20929396 CTTGCCTGATTCGCCAACCAGATCTAAAGTAACTTACACGTACATACTTCCTCTGTTGTGGTAC CATATTGTGATCACATTCCTTTGTGAAACAGTAGAACTTCTTCTCCTTTCCTTGCCACAATCTC CAAGCTAGAACGTACTCTCTCGATGTCAACAAGGGAAACTTTTTAATGGTGCGACCAATCTCAA TTCCAGTATTACTATCAACAATCTCTGCAGAGAAACCCTCGAAGACCGTGACACTTAGGTACTT CATAGGACCACCGCCATCTTTGGGTTTGCAGCGTTTAGCAGAGTATGAAATGCGATCGTTGCTT TTGTGAATAACATGTTCCCATATCTCCGTGGAATCATTTGTTTCCTCCTCCAAATTCTCGATCA GAAATTTCAAATCTTCATCAGAGACTAGTTTGGATATC
Transcript length: 497 Transcript exons: 20928728-20929396 CTTGCCTGATTCGCCAACCAGATCTAAAGTAACTTACACGTACATACTTCCTCTGTTGTGGTAC CATATTGTGATCACATTCCTTTGTGAAACAGTAGAACTTCTTCTCCTTTCCTTGCCACAATCTC CAAGCTAGAACGTACTCTCTCGATGTCAACAAGGGAAACTTTTTAATGGTGCGACCAATCTCAA TTCCAGTATTACTATCAACCTGCAACTGCTCATGCTCAACCACAGTCTTATCCCATAGTTTCCT ATAATCATTGTCCATGTAAAAGTCCCTCACAATCTCTGCAGAGAAACCCTCGAAGACCGTGACA CTTAGGTACTTCATAGGACCACCGCCATCTTTGGGTTTGCAGCGTTTAGCAGAGTATGAAATGC GATCGTTGCTTTTGTGAATAACATGTTCCCATATCTCCGTGGAATCATTTGTTTCCTCCTCCAA ATTCTCGATCAGAAATTTCAAATCTTCATCAGAGACTAGTTTGGATATC
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Genomic sequence |
CTTGCCTGATTCGCCAACCAGATCTAAAGTAACTTACACGTACATACTTCCTCTGTTGTGGTAC CATATTGTGATCACATTCCTAATAGTAACCAAAGAGCAAAATGATAAGTAAAGAAGCAACAACA AATTGCGACAGATAGAGGGAGAGAGAGGTTTTTTGGTTGAATTTGACCTTTGTGAAACAGTAGA ACTTCTTCTCCTTTCCTTGCCACAATCTCCAAGCTAGAACGTACTCTCTCGATGTCAACAAGGG AAACTTTTTAATGGTGCGACCAATCTCAATTCCAGTATTACTATCAACCTGCAACTGCTCATGC TCAACCACAGTCTTATCCCATAGTTTCCTATAATCATTGTCCATGTAAAAGTCCCTCACAATCT CTGCAGAGAAACCCTCGAAGACCGTGACACTTAGGTACTTCATAGGACCACCGCCATCCTAATA ATAGAGCCAAAAGGATACTCAGTAATCAGAATAATAAAAGACTAAAAAGACACTTTTGAAAGTA AGTTACTACTTTGGGTTTGCAGCGTTTAGCAGAGTATGAAATGCGATCGTTGCTTTTGTGAATA ACATGTTCCCATATCTCCGTGGAATCATTTGTTTCCTCCTCCAAATTCTCGATCAGAAATTTCA AATCTTCATCAGAGACTAGTTTGGATATC |