Plant Circular RNA Database

Detail information of Zm00001d040864_circ_g.1

			
						 General Information
					
						CircRNA Name
						Zm00001d040864_circ_g.1
					
						ID in PlantcircBase
						zma_circ_007580
					
						Alias
						zma_circ_0001481
					
						Organism
						
							Zea mays						
					
						Position
						
							chr3: 73231785-73236469  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							ie-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							Zm00001d000553						
					
						Parent gene annotation
						
							lincRNA
							
						Parent gene strand
						-
					
						Alternative splicing
						
							NA						
					
						Support reads
						NA
					
						Tissues
						leaf, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d040864_T009:2
Zm00001d040864_T005:2
Zm00001d040864_T012:2
Zm00001d040864_T007:3
Zm00001d040864_T008:2
Zm00001d040864_T013:1
Zm00001d040864_T010:3
Zm00001d040864_T003:3
Zm00001d040864_T002:2
Zm00001d040864_T013:1
Zm00001d040864_T010:3
Zm00001d040864_T003:3
Zm00001d040864_T002:2
Zm00001d000553_T001:3
Zm00001d040864_T007:3
Zm00001d040864_T008:2
Zm00001d040864_T009:2
Zm00001d040864_T005:2
Zm00001d040864_T012:2

General Information
CircRNA Name	Zm00001d040864_circ_g.1
ID in PlantcircBase	zma_circ_007580
Alias	zma_circ_0001481
Organism	Zea mays
Position	chr3: 73231785-73236469 JBrowse»
Reference genome	AGPv4.38
Type	ie-circRNA
Identification method	find_circ
Parent gene	Zm00001d000553
Parent gene annotation	lincRNA
Parent gene strand	-
Alternative splicing	NA
Support reads	NA
Tissues	leaf, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d040864_T009:2 Zm00001d040864_T005:2 Zm00001d040864_T012:2 Zm00001d040864_T007:3 Zm00001d040864_T008:2 Zm00001d040864_T013:1 Zm00001d040864_T010:3 Zm00001d040864_T003:3 Zm00001d040864_T002:2 Zm00001d040864_T013:1 Zm00001d040864_T010:3 Zm00001d040864_T003:3 Zm00001d040864_T002:2 Zm00001d000553_T001:3 Zm00001d040864_T007:3 Zm00001d040864_T008:2 Zm00001d040864_T009:2 Zm00001d040864_T005:2 Zm00001d040864_T012:2

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GTCAAAAGTATTGTGAGAAAAGCCACATAAGTTCCATATGAGCGGTACACTAAGAGAAATTTCT
GACCAATTTTACTCAGATATGATGCGATTTTTTTCTcttcagccaatcatacattgttaaagat
gtggttgtgcaagaccaatcaagtacacaccgcaattcatacaagaatggtaaagcacgataca
gacggaag

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CTTCAGCCAATCATACATTGTTAAAGATGTGGTTGTGCAAGACCAATCAAGTACACACCGCAAT
TCATACAAGAATGGTAAAGCACGATACAGACGGAAGCCCAAGTAATTCACTTGAGTAACTTTGC
TAGTCAAGAACTGCCTATATAGGTTGCTTTTGTTAGGAATACCATATCTGATCTGTAAAGCTTG
CAGTGCTAGGGAAATTGATTTTGTAAGGTAGATTGCACGTAGTACAAGTCCTCCAATATCCCTG
TGAGCTAGCTCCGTTCCCCAAGCATATTCAGTGACAGAATACGTGAAAAGCACAAGGTTAAAAA
GATAGAAAACAACTTTGCCGGTAGCAAAGGACCAAAGATATATAATGCGGTCAACCACTATCAA
GAAAAAGAGAACCTGCAAGAGGTTTGGCAATCAATAAGGAAAACATCTCATAAGATGAAACTTA
ACTAAAACAGTAAATTAGCTCACCATAAGGATGAAAACAAATTCTTTTGGGAACTGATCCTCCA
GCTGGTAAACTTCCAAGAATTCACTCTTATTTTTTAGGATAGATTGATAGAACATTGCAACAAG
GAAGAAAACTGCCAAGTCGGCGCCAAAATAATATGCATAAAGATCGATCTCTCTTTTACCCCCA
CCAATCACCGAGACGATCGGGTAAGGAAAATTTATTTCTTCAAAAAATCCTGCTTTCTGTGATT
CATGAATCTCTCTTTCTACATCAGCTGCTGGAGTGAGAGATTTGTGCCATCCCTTAGATTGGCA
CTCTACAGGAGCAGCATAAACAACTTCTAGTACAGCAAGAGCCATATTACAATTTTCTTTGCTT
TTTTCAATACTTTGAATCCGGACTTTACTACAACAGTGGCAAGAGGAAGGCAAGTTTGCCTGAC
ATCTTTCTTCATGAGCAATAGCAAGCACCCTATTTATGGCAGACTCTATCCTCTCTGGCTGGAT
TCCATCTTCTGGCCAATGGCTTACCTCCATTGTAACTTGCACAAAATATGGAGGAGATTCAGCT
CCATGTGTTAATGACATCCAGTATCTAGATAAGCCTCTAACAATCATCCTTATGAGATCAAAAA
CAGGCAAGGGCAAACTTTTTAGCTTCTCTCTCCAACTGTAAGCTACACAGTGTTTCTCTTCAAT
GTTGTTCCTTGCACTAAGAAAGCTGAATTCTGTTACCGGAACCCATTCACCATCTTTGGCAGTG
ATCGAGCTCTGCAAGAGAGTGGATATATAGACTAAAAAGAGAGGCAATATGCTGACGACAAATG
ATGCTTTTATTTTATTGTCAGGGAAACCTAATCTCTGAAGAAGAGGTAAATGTATATTCAAACC
ACAGTGTTGAATGATAATCTGATATATATACTGTGACAGAATGTTGACCTCGGTGTAGATCAGA
ATGATGACCCAAAACAAGTAACTTGGGCCATAGTTCACACAAAGAGCATATAAGAAAAGTGCCC
CAAGGTAGGCCATGGATAACAAACTAAAATTCCACATGAAAACCAGAATAAAACAGCAATAGCA
AACATAATCATAATTACTTCGCATCTGATACCATATATACTGAAAAATCACACCAATTGGCATG
CTTGATTTCGCTTTAGTCCCTGTGGTATCTGGAACTGAATGTGTTCTTGGAAGCTGCCCATCTT
GTGTTTCCCTCTGACTTTCAACAACATCATAGATGTCACTTTCTGCATGATGCTCATTGGAGTG
TGGCTCATCTGGATCAATGTTCAAGAAGCTAACAATATTTGTGACTGCCTGGTTCCCAAATGAC
TGAACTTGAGAAACACCATCGCCAATCAATTGTACAGCTGATTTTAGTGGGTTTTCCTTATATT
GTCCCCTTGCCTTCTCCCCTCTCGATAAATTACAATTAACTTTGTCATCACTCTCAACCTCAGT
GATCTCAGGTGTCAAACCAAGGGAATATTTTCTAATGTTATCAGTGAGCACATGTTCTTCACTT
CTTCCCCTGATCGGTGATCTCATAGTATCAGATGAACCCTGGAATATCAAATCTGCCATGTTAT
GCTGTGTATCTGTTACAGAAAAATCAAACGACTGTGGTGACTCTGTGCTTCCAATCTTATCTTG
TTTTGTTTGTGCGACAATATCATTATCTTCATGCGAGGTATTAGCATCACTATTATGTTTCACA
TTTCTCCTGTGCCTCAAGCCTTCATTGTGAGATGTATCATTTATTGGTGTGAAAGAGTTCATTC
TGTTAAGTTGACTTTGCAAATTGTACATCTCAGACTTCATCCTCTCCACCTGCATATTCCGCTG
ACGTTTATGCTCCTCAGACCTGCGAAGATGATGCAGCTGCTCAGTTTTCTTTAAAGCTTTTTTT
TCCTGCTCACGGACCATGGCACCAATTTGCTCTGCTTCAAGATATCTTGACACATAATCGAACT
CACTAGAGCTAAAGATGTATGATTGAACAGATACCAATAGGAAGATTACTATCTCAACAAAAGC
TGACCGTGATGTTATCTTAAACCCATAGTCATATTTGTATAATCCAATTATCTCATATAGGTAG
TCAATTTGATCGCACTTGCCAGAGCTAAATTGCCCAACATAAGGAGATTGATAAGCAAGTGACA
AAACAATGAGACCAAAATTATACATCCGTAGAAACTTGAAAATCCTATTCTTCTTCTTCAAGAT
TTCAAGTCTCATTCTAAAGAAAACCAGAGCAAATCCGAGATAACCAAGGTGCAGAACATCATAC
TCTAGAGTACCGGTAATTGCAATTAGTGCCAAAACTATGTCCAATAAATGGCAATAGGCATAAA
GCCGCACATAGTCAAGGAATGTCCAAAAGCTTTTTGTTTCCAGTGAGAGGTCCCTCCATACTAC
TGCATTTTTCCTTTGGGACATCATCTGCCGATATGTGTCCGAGTCTGAGAAGCTCGAAAAGTGA
TCAGACCGAAGCTTAAAAGAGGAAAATATAAACACAACATAGTAGCTAATCAGCATTCGAGGAT
CATCAGCAATTATCCCTGGATCATGTTCATGTAGAAATAGTTGGTAAATAAATATTCTGATGTA
CCGAACTATAAAACAGCATTTAATAGCATCGAGTTACAGCAAGGAAAGACTCAATGACATACCA
AGCCAGCATTTTGAGCAGTAGTCAAAAAAAATCCTTGAATTCTTCCAGCACTCACGGCAATGGA
CTTCAATGTCATTGGTACCATGATACCAGGTTATCTCATCATTCCAAAGAGCAACATATTCAAG
TATTAAGACAGAAGCAAACAGAAACACAAAAAGGGGCCACAATTTCTGGATTAGATCTCTGTTC
ATAAGAATGCAAAGGACAAGGCACATGATATAGAAGATCGATACAACATTCAACAGTGTAAAGC
TTGCTAATAGTAACACAATCATGTTAATTTCCAGACCTCGCAGTTTGAAAAGATTTTCTATCCA
GAATTTCATGTAACATTTGAATGTTGTCTTCTGGGTTTCGAATCTTTCTCTTCTCAGAAAAATA
ACCCTTTTCTTGTCCCACTTGTGGCTTTCTTTTGACAATCCCCAAATCTTTGCAAATGAGTGTC
TTTTGTCCTCATCTGAGCCTTCGATGGCATTATCAACATACTCTAATTTCTGGTGAATGCTGCC
TGGACCCACTGATGAGCTTGAACTTGAACTACTACCTATAAGACCTTGAACTTTAGAAAACAAT
GAAGTAAACCTATTAGATGAATGACTTTCTTCGTTGCTTCTGACAGGACTATAAGGTGGGTTGG
AAGAGATAAAAAGTTGACAGGGCTCTTCCCATTTACCCTTATGTACTAGAGATGTTGGCATCAA
ATCTAGCCAATGGAAAACATTATACTGAATGGTACAGGCCACAATCACTAAAACTTTTCCCCTA
AGCCTGTATTCGATACCCCAAAACCCAGAATCATAGTATTTCAGACCAAGAAACACAGACAAAC
CATAGAAGTGCTGATGAGGACACATCTGTGCAGGTTTGCACACCATTTGAAATAGATATTCAGA
TGCAGCAAGCAAACCAGTGTAGACAAGGTAAACCTTGGAAGGAATTCGAGAAACTTTTGGTAAC
GTAGAAAACACAATAAGCCCTAACAGGTAAATTAGGCCAGATAAACTGATTGATGATAAGCAAG
CATAAAACACACAAACTGATAATATCTTGTCGCTGTGCCAAATTAGAAACCTTCTTAGGAACCC
CAGAAGTCCAGATTCTGAAGCATCAGATACACCAAAGTTCTTGTCACTGTTTTGTCTTCGTTCA
TAACTGTAAAGTTGCATTACGACTAGAATGGCCAATGATTGCCAAACATTTTCCAGCAAAGAAG
CTTCAGGGTCAAATCCCAGATCAGGGTATAGTTTAAGGAACTTTGAGACTGATTCTGCAAAGAT
CGGTGAAACACTCAGGCTGTAGGTAAAAATAAAAACAACCGTAGCATATACTTTTAGAGGAAAC
CACAGTCGCCTTTTTGTTTTCTCCACAAGCTGCCTTCCAATAATCCAAAATAGAAGGAAAAATA
GGTAACCAAATGATATATAATTAGGGGTCACCAAGTATAGAGTCAAAAGTATTGTGAGAAAAGC
CACATAAGTTCCATATGAGCGGTACACTAAGAGAAATTTCTGACCAATTTTACTCAGATATGAT
GCGATTTTTTTCT
						
					

			
		

Sequences
Splice junction sequence	GTCAAAAGTATTGTGAGAAAAGCCACATAAGTTCCATATGAGCGGTACACTAAGAGAAATTTCT GACCAATTTTACTCAGATATGATGCGATTTTTTTCTcttcagccaatcatacattgttaaagat gtggttgtgcaagaccaatcaagtacacaccgcaattcatacaagaatggtaaagcacgataca gacggaag
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CTTCAGCCAATCATACATTGTTAAAGATGTGGTTGTGCAAGACCAATCAAGTACACACCGCAAT TCATACAAGAATGGTAAAGCACGATACAGACGGAAGCCCAAGTAATTCACTTGAGTAACTTTGC TAGTCAAGAACTGCCTATATAGGTTGCTTTTGTTAGGAATACCATATCTGATCTGTAAAGCTTG CAGTGCTAGGGAAATTGATTTTGTAAGGTAGATTGCACGTAGTACAAGTCCTCCAATATCCCTG TGAGCTAGCTCCGTTCCCCAAGCATATTCAGTGACAGAATACGTGAAAAGCACAAGGTTAAAAA GATAGAAAACAACTTTGCCGGTAGCAAAGGACCAAAGATATATAATGCGGTCAACCACTATCAA GAAAAAGAGAACCTGCAAGAGGTTTGGCAATCAATAAGGAAAACATCTCATAAGATGAAACTTA ACTAAAACAGTAAATTAGCTCACCATAAGGATGAAAACAAATTCTTTTGGGAACTGATCCTCCA GCTGGTAAACTTCCAAGAATTCACTCTTATTTTTTAGGATAGATTGATAGAACATTGCAACAAG GAAGAAAACTGCCAAGTCGGCGCCAAAATAATATGCATAAAGATCGATCTCTCTTTTACCCCCA CCAATCACCGAGACGATCGGGTAAGGAAAATTTATTTCTTCAAAAAATCCTGCTTTCTGTGATT CATGAATCTCTCTTTCTACATCAGCTGCTGGAGTGAGAGATTTGTGCCATCCCTTAGATTGGCA CTCTACAGGAGCAGCATAAACAACTTCTAGTACAGCAAGAGCCATATTACAATTTTCTTTGCTT TTTTCAATACTTTGAATCCGGACTTTACTACAACAGTGGCAAGAGGAAGGCAAGTTTGCCTGAC ATCTTTCTTCATGAGCAATAGCAAGCACCCTATTTATGGCAGACTCTATCCTCTCTGGCTGGAT TCCATCTTCTGGCCAATGGCTTACCTCCATTGTAACTTGCACAAAATATGGAGGAGATTCAGCT CCATGTGTTAATGACATCCAGTATCTAGATAAGCCTCTAACAATCATCCTTATGAGATCAAAAA CAGGCAAGGGCAAACTTTTTAGCTTCTCTCTCCAACTGTAAGCTACACAGTGTTTCTCTTCAAT GTTGTTCCTTGCACTAAGAAAGCTGAATTCTGTTACCGGAACCCATTCACCATCTTTGGCAGTG ATCGAGCTCTGCAAGAGAGTGGATATATAGACTAAAAAGAGAGGCAATATGCTGACGACAAATG ATGCTTTTATTTTATTGTCAGGGAAACCTAATCTCTGAAGAAGAGGTAAATGTATATTCAAACC ACAGTGTTGAATGATAATCTGATATATATACTGTGACAGAATGTTGACCTCGGTGTAGATCAGA ATGATGACCCAAAACAAGTAACTTGGGCCATAGTTCACACAAAGAGCATATAAGAAAAGTGCCC CAAGGTAGGCCATGGATAACAAACTAAAATTCCACATGAAAACCAGAATAAAACAGCAATAGCA AACATAATCATAATTACTTCGCATCTGATACCATATATACTGAAAAATCACACCAATTGGCATG CTTGATTTCGCTTTAGTCCCTGTGGTATCTGGAACTGAATGTGTTCTTGGAAGCTGCCCATCTT GTGTTTCCCTCTGACTTTCAACAACATCATAGATGTCACTTTCTGCATGATGCTCATTGGAGTG TGGCTCATCTGGATCAATGTTCAAGAAGCTAACAATATTTGTGACTGCCTGGTTCCCAAATGAC TGAACTTGAGAAACACCATCGCCAATCAATTGTACAGCTGATTTTAGTGGGTTTTCCTTATATT GTCCCCTTGCCTTCTCCCCTCTCGATAAATTACAATTAACTTTGTCATCACTCTCAACCTCAGT GATCTCAGGTGTCAAACCAAGGGAATATTTTCTAATGTTATCAGTGAGCACATGTTCTTCACTT CTTCCCCTGATCGGTGATCTCATAGTATCAGATGAACCCTGGAATATCAAATCTGCCATGTTAT GCTGTGTATCTGTTACAGAAAAATCAAACGACTGTGGTGACTCTGTGCTTCCAATCTTATCTTG TTTTGTTTGTGCGACAATATCATTATCTTCATGCGAGGTATTAGCATCACTATTATGTTTCACA TTTCTCCTGTGCCTCAAGCCTTCATTGTGAGATGTATCATTTATTGGTGTGAAAGAGTTCATTC TGTTAAGTTGACTTTGCAAATTGTACATCTCAGACTTCATCCTCTCCACCTGCATATTCCGCTG ACGTTTATGCTCCTCAGACCTGCGAAGATGATGCAGCTGCTCAGTTTTCTTTAAAGCTTTTTTT TCCTGCTCACGGACCATGGCACCAATTTGCTCTGCTTCAAGATATCTTGACACATAATCGAACT CACTAGAGCTAAAGATGTATGATTGAACAGATACCAATAGGAAGATTACTATCTCAACAAAAGC TGACCGTGATGTTATCTTAAACCCATAGTCATATTTGTATAATCCAATTATCTCATATAGGTAG TCAATTTGATCGCACTTGCCAGAGCTAAATTGCCCAACATAAGGAGATTGATAAGCAAGTGACA AAACAATGAGACCAAAATTATACATCCGTAGAAACTTGAAAATCCTATTCTTCTTCTTCAAGAT TTCAAGTCTCATTCTAAAGAAAACCAGAGCAAATCCGAGATAACCAAGGTGCAGAACATCATAC TCTAGAGTACCGGTAATTGCAATTAGTGCCAAAACTATGTCCAATAAATGGCAATAGGCATAAA GCCGCACATAGTCAAGGAATGTCCAAAAGCTTTTTGTTTCCAGTGAGAGGTCCCTCCATACTAC TGCATTTTTCCTTTGGGACATCATCTGCCGATATGTGTCCGAGTCTGAGAAGCTCGAAAAGTGA TCAGACCGAAGCTTAAAAGAGGAAAATATAAACACAACATAGTAGCTAATCAGCATTCGAGGAT CATCAGCAATTATCCCTGGATCATGTTCATGTAGAAATAGTTGGTAAATAAATATTCTGATGTA CCGAACTATAAAACAGCATTTAATAGCATCGAGTTACAGCAAGGAAAGACTCAATGACATACCA AGCCAGCATTTTGAGCAGTAGTCAAAAAAAATCCTTGAATTCTTCCAGCACTCACGGCAATGGA CTTCAATGTCATTGGTACCATGATACCAGGTTATCTCATCATTCCAAAGAGCAACATATTCAAG TATTAAGACAGAAGCAAACAGAAACACAAAAAGGGGCCACAATTTCTGGATTAGATCTCTGTTC ATAAGAATGCAAAGGACAAGGCACATGATATAGAAGATCGATACAACATTCAACAGTGTAAAGC TTGCTAATAGTAACACAATCATGTTAATTTCCAGACCTCGCAGTTTGAAAAGATTTTCTATCCA GAATTTCATGTAACATTTGAATGTTGTCTTCTGGGTTTCGAATCTTTCTCTTCTCAGAAAAATA ACCCTTTTCTTGTCCCACTTGTGGCTTTCTTTTGACAATCCCCAAATCTTTGCAAATGAGTGTC TTTTGTCCTCATCTGAGCCTTCGATGGCATTATCAACATACTCTAATTTCTGGTGAATGCTGCC TGGACCCACTGATGAGCTTGAACTTGAACTACTACCTATAAGACCTTGAACTTTAGAAAACAAT GAAGTAAACCTATTAGATGAATGACTTTCTTCGTTGCTTCTGACAGGACTATAAGGTGGGTTGG AAGAGATAAAAAGTTGACAGGGCTCTTCCCATTTACCCTTATGTACTAGAGATGTTGGCATCAA ATCTAGCCAATGGAAAACATTATACTGAATGGTACAGGCCACAATCACTAAAACTTTTCCCCTA AGCCTGTATTCGATACCCCAAAACCCAGAATCATAGTATTTCAGACCAAGAAACACAGACAAAC CATAGAAGTGCTGATGAGGACACATCTGTGCAGGTTTGCACACCATTTGAAATAGATATTCAGA TGCAGCAAGCAAACCAGTGTAGACAAGGTAAACCTTGGAAGGAATTCGAGAAACTTTTGGTAAC GTAGAAAACACAATAAGCCCTAACAGGTAAATTAGGCCAGATAAACTGATTGATGATAAGCAAG CATAAAACACACAAACTGATAATATCTTGTCGCTGTGCCAAATTAGAAACCTTCTTAGGAACCC CAGAAGTCCAGATTCTGAAGCATCAGATACACCAAAGTTCTTGTCACTGTTTTGTCTTCGTTCA TAACTGTAAAGTTGCATTACGACTAGAATGGCCAATGATTGCCAAACATTTTCCAGCAAAGAAG CTTCAGGGTCAAATCCCAGATCAGGGTATAGTTTAAGGAACTTTGAGACTGATTCTGCAAAGAT CGGTGAAACACTCAGGCTGTAGGTAAAAATAAAAACAACCGTAGCATATACTTTTAGAGGAAAC CACAGTCGCCTTTTTGTTTTCTCCACAAGCTGCCTTCCAATAATCCAAAATAGAAGGAAAAATA GGTAACCAAATGATATATAATTAGGGGTCACCAAGTATAGAGTCAAAAGTATTGTGAGAAAAGC CACATAAGTTCCATATGAGCGGTACACTAAGAGAAATTTCTGACCAATTTTACTCAGATATGAT GCGATTTTTTTCT

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.103919086

Conservation Information
Conserved circRNAs	NA
PMCS	0.103919086

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							73236408-73231805(+)
73236091-73236448(-)
						
					

						Potential amino acid sequence
						
							MSGTLREISDQFYSDMMRFFSLQPIIHC*(+)
MQLYSYERRQNSDKNFGVSDASESGLLGFLRRFLIWHSDKILSVCVFYACLSSISLSGLIYLLG
LIVFSTLPKVSRIPSKVYLVYTGLLAASEYLFQMVCKPAQMCPHQHFYGLSVFLGLKYYDSGFW
GIEYRLRGKVLVIVACTIQYNVFHWLDLMPTSLVHKGKWEEPCQLFISSNPPYSPVRSNEESHS
SNRFTSLFSKVQGLIGSSSSSSSSVGPGSIHQKLEYVDNAIEGSDEDKRHSFAKIWGLSKESHK
WDKKRVIFLRRERFETQKTTFKCYMKFWIENLFKLRGLEINMIVLLLASFTLLNVVSIFYIMCL
VLCILMNRDLIQKLWPLFVFLFASVLILEYVALWNDEITWYHGTNDIEVHCRECWKNSRIFFDY
CSKCWLGIIADDPRMLISYYVVFIFSSFKLRSDHFSSFSDSDTYRQMMSQRKNAVVWRDLSLET
KSFWTFLDYVRLYAYCHLLDIVLALIAITGTLEYDVLHLGYLGFALVFFRMRLEILKKKNRIFK
FLRMYNFGLIVLSLAYQSPYVGQFSSGKCDQIDYLYEIIGLYKYDYGFKITSRSAFVEIVIFLL
VSVQSYIFSSSEFDYVSRYLEAEQIGAMVREQEKKALKKTEQLHHLRRSEEHKRQRNMQVERMK
SEMYNLQSQLNRMNSFTPINDTSHNEGLRHRRNVKHNSDANTSHEDNDIVAQTKQDKIGSTESP
QSFDFSVTDTQHNMADLIFQGSSDTMRSPIRGRSEEHVLTDNIRKYSLGLTPEITEVESDDKVN
CNLSRGEKARGQYKENPLKSAVQLIGDGVSQVQSFGNQAVTNIVSFLNIDPDEPHSNEHHAESD
IYDVVESQRETQDGQLPRTHSVPDTTGTKAKSSMPIGVIFQYIWYQMRSNYDYVCYCCFILVFM
WNFSLLSMAYLGALFLYALCVNYGPSYLFWVIILIYTEVNILSQYIYQIIIQHCGLNIHLPLLQ
RLGFPDNKIKASFVVSILPLFLVYISTLLQSSITAKDGEWVPVTEFSFLSARNNIEEKHCVAYS
WREKLKSLPLPVFDLIRMIVRGLSRYWMSLTHGAESPPYFVQVTMEVSHWPEDGIQPERIESAI
NRVLAIAHEERCQANLPSSCHCCSKVRIQSIEKSKENCNMALAVLEVVYAAPVECQSKGWHKSL
TPAADVEREIHESQKAGFFEEINFPYPIVSVIGGGKREIDLYAYYFGADLAVFFLVAMFYQSIL
KNKSEFLEVYQLEDQFPKEFVFILMVLFFLIVVDRIIYLWSFATGKVVFYLFNLVLFTYSVTEY
AWGTELAHRDIGGLVLRAIYLTKSISLALQALQIRYGIPNKSNLYRQFLTSKVTQVNYLGFRLY
RALPFLYELRCVLDWSCTTTSLTMYDWLKRKKSHHI*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	73236408-73231805(+) 73236091-73236448(-)
Potential amino acid sequence	MSGTLREISDQFYSDMMRFFSLQPIIHC(+) MQLYSYERRQNSDKNFGVSDASESGLLGFLRRFLIWHSDKILSVCVFYACLSSISLSGLIYLLG LIVFSTLPKVSRIPSKVYLVYTGLLAASEYLFQMVCKPAQMCPHQHFYGLSVFLGLKYYDSGFW GIEYRLRGKVLVIVACTIQYNVFHWLDLMPTSLVHKGKWEEPCQLFISSNPPYSPVRSNEESHS SNRFTSLFSKVQGLIGSSSSSSSSVGPGSIHQKLEYVDNAIEGSDEDKRHSFAKIWGLSKESHK WDKKRVIFLRRERFETQKTTFKCYMKFWIENLFKLRGLEINMIVLLLASFTLLNVVSIFYIMCL VLCILMNRDLIQKLWPLFVFLFASVLILEYVALWNDEITWYHGTNDIEVHCRECWKNSRIFFDY CSKCWLGIIADDPRMLISYYVVFIFSSFKLRSDHFSSFSDSDTYRQMMSQRKNAVVWRDLSLET KSFWTFLDYVRLYAYCHLLDIVLALIAITGTLEYDVLHLGYLGFALVFFRMRLEILKKKNRIFK FLRMYNFGLIVLSLAYQSPYVGQFSSGKCDQIDYLYEIIGLYKYDYGFKITSRSAFVEIVIFLL VSVQSYIFSSSEFDYVSRYLEAEQIGAMVREQEKKALKKTEQLHHLRRSEEHKRQRNMQVERMK SEMYNLQSQLNRMNSFTPINDTSHNEGLRHRRNVKHNSDANTSHEDNDIVAQTKQDKIGSTESP QSFDFSVTDTQHNMADLIFQGSSDTMRSPIRGRSEEHVLTDNIRKYSLGLTPEITEVESDDKVN CNLSRGEKARGQYKENPLKSAVQLIGDGVSQVQSFGNQAVTNIVSFLNIDPDEPHSNEHHAESD IYDVVESQRETQDGQLPRTHSVPDTTGTKAKSSMPIGVIFQYIWYQMRSNYDYVCYCCFILVFM WNFSLLSMAYLGALFLYALCVNYGPSYLFWVIILIYTEVNILSQYIYQIIIQHCGLNIHLPLLQ RLGFPDNKIKASFVVSILPLFLVYISTLLQSSITAKDGEWVPVTEFSFLSARNNIEEKHCVAYS WREKLKSLPLPVFDLIRMIVRGLSRYWMSLTHGAESPPYFVQVTMEVSHWPEDGIQPERIESAI NRVLAIAHEERCQANLPSSCHCCSKVRIQSIEKSKENCNMALAVLEVVYAAPVECQSKGWHKSL TPAADVEREIHESQKAGFFEEINFPYPIVSVIGGGKREIDLYAYYFGADLAVFFLVAMFYQSIL KNKSEFLEVYQLEDQFPKEFVFILMVLFFLIVVDRIIYLWSFATGKVVFYLFNLVLFTYSVTEY AWGTELAHRDIGGLVLRAIYLTKSISLALQALQIRYGIPNKSNLYRQFLTSKVTQVNYLGFRLY RALPFLYELRCVLDWSCTTTSLTMYDWLKRKKSHHI(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ma et al., 2021b

circRNA

Detail information of Zm00001d040864_circ_g.1

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