Plant Circular RNA Database

Detail information of Os12g0291000_circ_g.3

			
						 General Information
					
						CircRNA Name
						Os12g0291000_circ_g.3
					
						ID in PlantcircBase
						osa_circ_011173
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr12: 11253860-11257150  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os12g0291000						
					
						Parent gene annotation
						
							Similar to DNA-directed DNA polymerase family protein. (Os12t029
1000-00)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							NA						
					
						Support reads
						1
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os12t0291000-00:6

General Information
CircRNA Name	Os12g0291000_circ_g.3
ID in PlantcircBase	osa_circ_011173
Alias	NA
Organism	Oryza sativa
Position	chr12: 11253860-11257150 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os12g0291000
Parent gene annotation	Similar to DNA-directed DNA polymerase family protein. (Os12t029 1000-00)
Parent gene strand	+
Alternative splicing	NA
Support reads	1
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os12t0291000-00:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GCCCAGAAGATGCTGCACAGAAAATCCAAAGTTTTAAGAGGTTCTTTCCTGGTGTCTCTTCATG
GCTACACGAAGCTGTGGCATCATGTCGTCATAAAGGgtgattctggtttacgccgaatgcaatt
gggtattgccaagaagataaaaaatggagctcgaaaaattgttcttgaggaggcagaagcagct
agagtagc

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 2065
Transcript exons: 11253860-11254809,11255004-11255201,11255275-11255534,11
256297-11256486,11256601-11256714,11256798-11257150
GTGATTCTGGTTTACGCCGAATGCAATTGGGTATTGCCAAGAAGATAAAAAATGGAGCTCGAAA
AATTGTTCTTGAGGAGGCAGAAGCAGCTAGAGTAGCAGCATTCTCAGCTTTCAAGTCACTTGGT
GTACAAGTTCCTCAGTTTACTACACCTCTACTCCCAACTATCGATGAACCCCCAACTCGAGATA
GCATGGTTTCTGTTGGCAGAGGTCAAGCTAGTGATGATACAAATAACTGCTTCAGTTATGGTTC
TCAAAGGGCTTCTACAGAGAGAACTTTAGGGAACGATATGCACCCTGGTTCTTCCATACAAATA
ACAGAGAGTGCAAGAATAGTGAATAATGCCAACATCGTTGTCCAAGTAGCATCACCTTTCTCCA
TAGAAACTAAATTAAGCAGCAGAAATGTGGCTGACAAAGGCCCTGTTAATGCATATAATTTCCC
AGGAGGGTTTGACAGTTTTCTTGATCAATGGTCTACTGTTAGTGAGTTTTCTTTTGATCTTCAT
TATGTCAAGAAGTCAATTAAATCATCTTCAACCTATTTCGATATTCTTGGTTTGGCTGTCTGTT
GGGAAAATTCACCTGTTTACTACTGCAACTTTCCGAAAGACCTAATGATGGCTGGTAGCAATGA
CTCCATTGAAATGTGGGACGAACTAACGAGAAGATGGAACAGAGTAATCGAAATTATGCGACAA
AACAGTGTCAAAAAAATGACCTGGAATTTAAAGTTCCAGATTCAAGCATTGAAGTATCCCTGTG
TTTCTTGTCAACGGCTCTCTAGACTTCATCTTGACTACAAAATGTTGAAGAATGTTGAAGTCCT
CGACAACTTGTATGTTTTCCTACAACCAGTTTCTGTCCACAGTGGATTGGACATATGCTTGGTG
GCATGGGTTCTCTGGCCTGATGAGGAAAGTAAAACAGTGCCAAATCTTGAGAAGTTAGTGAAGA
GACGACTACACAATGAAGCTGCAGCAGCTGCAAATCGAGATGGCAGATGGAGAAATCAGATGCA
CAAAGCAGCTCATAATGGTTGCTGTCGGCGTGCTGCACAGACACGGGCATTGTGTTCTGTTTTG
AGGAAATTACTTGTTTCTCAAAATCTCAATGATTTACTCGAAACAATTGAGGGCCCATTGGTAA
ATGTTCTTGCTGATATGGAACTTTGGGGAATTGGTGCTGACATGGATGCATGTCTCCGTGCGAG
GCATATCATAATAAGAAAGCTGAAAGAACTAGAGAAAGAAGCTTATAAATTAGCTGGCAAGAGC
TTCTCACTAAATGCAACTGCTGACATCGCTGACGTTCTTTATACACACTTAAAACTGCCAGTTC
CAAAAGGTTGTGGGAAAGGAAAATTGCATCCTAGCACTGACAAGCAGTCCTTGGACCATCTAAG
GGATCAACATCCAATTATATCTGTAATTAAGGAACATAGAACATTGGCAAAACTGTTAAATGGC
ACCTTGGGGTCCATTTGCTCACGGGCTCAGTTGTGCAGCAAATCACAAAGATACATCATACAAG
GAAATTGGCTCCAGACATCAACTGCCACTGGCCGTCTATCAATGGAAGAACCAAATCTGCAGTG
TGTTGAGCACTTGGTGGATTTCACAACATTGAAGAATGATCATGATTCCACAAGCATGTCAATG
GTTGATCATCATGAAATCAATCCTCGTGATTTTTTCATTCCCACCCAAGAGAATTGGTTGCTGG
TAACAGCTGATTACTCACAGATCGAGCTGCGTTTAATGGCTCATTTTTCTAAAGATACTGCATT
GATTGAACTTCTAAGTAAACCAGATGGTGATGTATTTACTATGATTGCTTCAAGATGGACTGGT
AAAGCGGAGTCCTTGATCTGTTCAAAGGAAAGAGAGACCACCAAAAGATTTATTTATGGCATCC
TCTATGGAATGGGTGCCAACTCTCTAGCAGAACAACTTGAATGCAGCCCAGAAGATGCTGCACA
GAAAATCCAAAGTTTTAAGAGGTTCTTTCCTGGTGTCTCTTCATGGCTACACGAAGCTGTGGCA
TCATGTCGTCATAAAGG
						
					

						Genomic sequence
						
							GTGATTCTGGTTTACGCCGAATGCAATTGGGTATTGCCAAGAAGATAAAAAATGGAGCTCGAAA
AATTGTTCTTGAGGAGGCAGAAGCAGCTAGAGTAGCAGCATTCTCAGCTTTCAAGTCACTTGGT
GTACAAGTTCCTCAGTTTACTACACCTCTACTCCCAACTATCGATGAACCCCCAACTCGAGATA
GCATGGTTTCTGTTGGCAGAGGTCAAGCTAGTGATGATACAAATAACTGCTTCAGTTATGGTTC
TCAAAGGGCTTCTACAGAGAGAACTTTAGGGAACGATATGCACCCTGGTTCTTCCATACAAATA
ACAGAGAGTGCAAGAATAGTGAATAATGCCAACATCGTTGTCCAAGTAGCATCACCTTTCTCCA
TAGAAACTAAATTAAGCAGCAGAAATGTGGCTGACAAAGGCCCTGTTAATGCATATAATTTCCC
AGGAGGGTTTGACAGTTTTCTTGATCAATGGTCTACTGTTAGTGAGTTTTCTTTTGATCTTCAT
TATGTCAAGAAGTCAATTAAATCATCTTCAACCTATTTCGATATTCTTGGTTTGGCTGTCTGTT
GGGAAAATTCACCTGTTTACTACTGCAACTTTCCGAAAGACCTAATGATGGCTGGTAGCAATGA
CTCCATTGAAATGTGGGACGAACTAACGAGAAGATGGAACAGAGTAATCGAAATTATGCGACAA
AACAGTGTCAAAAAAATGACCTGGAATTTAAAGTTCCAGATTCAAGCATTGAAGTATCCCTGTG
TTTCTTGTCAACGGCTCTCTAGACTTCATCTTGACTACAAAATGTTGAAGAATGTTGAAGTCCT
CGACAACTTGTATGTTTTCCTACAACCAGTTTCTGTCCACAGTGGATTGGACATATGCTTGGTG
GCATGGGTTCTCTGGCCTGATGAGGAAAGTAAAACAGTGCCAAATCTTGAGAAGGTATAATATC
TTATGCTGTGATATAGAACTCATGCTTGGTTTCCTCTTTAAATGTTTTCATGGCAATCTCTTTC
AACCTTAACATTTCCCAATGATTTGTTAATTTTTTGACAGAAAAGATTTCTTAATTTTGATGCT
GAGATATTTCAGAAAATGTACTTTATTTGTAATTTTTACCTGATATTAATTAATAGTTAGTGAA
GAGACGACTACACAATGAAGCTGCAGCAGCTGCAAATCGAGATGGCAGATGGAGAAATCAGATG
CACAAAGCAGCTCATAATGGTTGCTGTCGGCGTGCTGCACAGACACGGGCATTGTGTTCTGTTT
TGAGGAAATTACTTGTTTCTCAAAATCTCAATGATTTACTCGAAACAATTGAGGGCCCATTGGT
ACGTTCTACCCTTGCCAAAATGCAATATTGTCATCAAATGCTTTGACATTCACATTATATTTGT
TGGGCAGGTAAATGTTCTTGCTGATATGGAACTTTGGGGAATTGGTGCTGACATGGATGCATGT
CTCCGTGCGAGGCATATCATAATAAGAAAGCTGAAAGAACTAGAGAAAGAAGCTTATAAATTAG
CTGGCAAGAGCTTCTCACTAAATGCAACTGCTGACATCGCTGACGTTCTTTATACACACTTAAA
ACTGCCAGTTCCAAAAGGTTGTGGGAAAGGAAAATTGCATCCTAGCACTGACAAGCAGTCCTTG
GACCATCTAAGGTATAAATTTGATCTATTTGTTGTGTGTGTCATTTCTAGGCATTGCAAATTTA
TTATATTAGCAAGTGTTTTTTTTTCCTTTCAATGTGCCAGTCACAAACTTTTCATGATTCAAGC
ATTTTTGAAATTTAAAATGTATTTCCTTGTATATCTAGTCTCAACAATGGTTCACTGACATAAT
GTCTTCATGTTGTATTATGTCTGGATTGAAGTATCCTTGTGTCCATTCTAGTTTCTGCATGTTG
AAGATGTCATTACGGTGTTGTCTTGATCTAAGCTGGAATTATTGGGGTGCCATCACATTTTATT
ATTATGTCTGATTACAGTATGTTTCAAGAGTTGCATGTCATGTTTGGCTTGGTGCTTCAAAGAA
TTATAGTAAAGTGAGGGTCAGGGAAGGAAGAAAATAATTCTTACGCCTTTCAGAATGTCATGGC
AATGCTGGCTCAGAATTTGTTGAACATGCCAATGAGTTGGCCAGGGAAACTTTATTACAAGTAG
TGCTGTAATCTGTATATTCTTTTGATGCTTCACTCAACCCTCACGTAATTTTTTGCAAGTTTCC
CAAGGAAAGTGTTTGCACTGGTAACAATAAGATTTCAGTAAATGTGGAGAATTGCTCTTGTTGA
ACTTCTAACTTAGATCATCACTCCGTCTAATAGTCTTTTGCTCTGTTTATTCAGGGATTGACAT
GTATTTAGAGATGCTTTGGTTTTGTTCATTTTTAATACAGTGTCATATTATTATGCTCTTTTTA
TTCAGGGATCAACATCCAATTATATCTGTAATTAAGGAACATAGAACATTGGCAAAACTGTTAA
ATGGCACCTTGGGGTCCATTTGCTCACGGGCTCAGTTGTGCAGCAAATCACAAAGATACATCAT
ACAAGGAAATTGGCTCCAGACATCAACTGCCACTGGCCGTCTATCAATGGAAGAACCAAATCTG
CAGGTTATGTTACATTATTGCTAGTGTTTTGTATAATATGATTATATTCATAGGTCATAGCAAT
GATTGACTGCATTTTTTCCTTAGAAAAAAAACTGACTGAACTATAATTTGTAGTGTGTTGAGCA
CTTGGTGGATTTCACAACATTGAAGAATGATCATGATTCCACAAGCATGTCAATGGTTGATCAT
CATGAAATCAATCCTCGTGATTTTTTCATTCCCACCCAAGTATTGCTCACTCAACAATTGTTTC
ATGCTGTATATATTTTCCTATCGCAAGTAAGGTAATTTTGTGGTCTCCTTTTTGCTAGGAGAAT
TGGTTGCTGGTAACAGCTGATTACTCACAGATCGAGCTGCGTTTAATGGCTCATTTTTCTAAAG
ATACTGCATTGATTGAACTTCTAAGTAAACCAGATGGTGATGTATTTACTATGATTGCTTCAAG
ATGGACTGGTAAAGCGGAGTCCTTGATCTGTTCAAAGGAAAGAGAGACCACCAAAAGATTTATT
TATGGCATCCTCTATGGAATGGGTGCCAACTCTCTAGCAGAACAACTTGAATGCAGCCCAGAAG
ATGCTGCACAGAAAATCCAAAGTTTTAAGAGGTTCTTTCCTGGTGTCTCTTCATGGCTACACGA
AGCTGTGGCATCATGTCGTCATAAAGG
						
					

			
		

Sequences
Splice junction sequence	GCCCAGAAGATGCTGCACAGAAAATCCAAAGTTTTAAGAGGTTCTTTCCTGGTGTCTCTTCATG GCTACACGAAGCTGTGGCATCATGTCGTCATAAAGGgtgattctggtttacgccgaatgcaatt gggtattgccaagaagataaaaaatggagctcgaaaaattgttcttgaggaggcagaagcagct agagtagc
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 2065 Transcript exons: 11253860-11254809,11255004-11255201,11255275-11255534,11 256297-11256486,11256601-11256714,11256798-11257150 GTGATTCTGGTTTACGCCGAATGCAATTGGGTATTGCCAAGAAGATAAAAAATGGAGCTCGAAA AATTGTTCTTGAGGAGGCAGAAGCAGCTAGAGTAGCAGCATTCTCAGCTTTCAAGTCACTTGGT GTACAAGTTCCTCAGTTTACTACACCTCTACTCCCAACTATCGATGAACCCCCAACTCGAGATA GCATGGTTTCTGTTGGCAGAGGTCAAGCTAGTGATGATACAAATAACTGCTTCAGTTATGGTTC TCAAAGGGCTTCTACAGAGAGAACTTTAGGGAACGATATGCACCCTGGTTCTTCCATACAAATA ACAGAGAGTGCAAGAATAGTGAATAATGCCAACATCGTTGTCCAAGTAGCATCACCTTTCTCCA TAGAAACTAAATTAAGCAGCAGAAATGTGGCTGACAAAGGCCCTGTTAATGCATATAATTTCCC AGGAGGGTTTGACAGTTTTCTTGATCAATGGTCTACTGTTAGTGAGTTTTCTTTTGATCTTCAT TATGTCAAGAAGTCAATTAAATCATCTTCAACCTATTTCGATATTCTTGGTTTGGCTGTCTGTT GGGAAAATTCACCTGTTTACTACTGCAACTTTCCGAAAGACCTAATGATGGCTGGTAGCAATGA CTCCATTGAAATGTGGGACGAACTAACGAGAAGATGGAACAGAGTAATCGAAATTATGCGACAA AACAGTGTCAAAAAAATGACCTGGAATTTAAAGTTCCAGATTCAAGCATTGAAGTATCCCTGTG TTTCTTGTCAACGGCTCTCTAGACTTCATCTTGACTACAAAATGTTGAAGAATGTTGAAGTCCT CGACAACTTGTATGTTTTCCTACAACCAGTTTCTGTCCACAGTGGATTGGACATATGCTTGGTG GCATGGGTTCTCTGGCCTGATGAGGAAAGTAAAACAGTGCCAAATCTTGAGAAGTTAGTGAAGA GACGACTACACAATGAAGCTGCAGCAGCTGCAAATCGAGATGGCAGATGGAGAAATCAGATGCA CAAAGCAGCTCATAATGGTTGCTGTCGGCGTGCTGCACAGACACGGGCATTGTGTTCTGTTTTG AGGAAATTACTTGTTTCTCAAAATCTCAATGATTTACTCGAAACAATTGAGGGCCCATTGGTAA ATGTTCTTGCTGATATGGAACTTTGGGGAATTGGTGCTGACATGGATGCATGTCTCCGTGCGAG GCATATCATAATAAGAAAGCTGAAAGAACTAGAGAAAGAAGCTTATAAATTAGCTGGCAAGAGC TTCTCACTAAATGCAACTGCTGACATCGCTGACGTTCTTTATACACACTTAAAACTGCCAGTTC CAAAAGGTTGTGGGAAAGGAAAATTGCATCCTAGCACTGACAAGCAGTCCTTGGACCATCTAAG GGATCAACATCCAATTATATCTGTAATTAAGGAACATAGAACATTGGCAAAACTGTTAAATGGC ACCTTGGGGTCCATTTGCTCACGGGCTCAGTTGTGCAGCAAATCACAAAGATACATCATACAAG GAAATTGGCTCCAGACATCAACTGCCACTGGCCGTCTATCAATGGAAGAACCAAATCTGCAGTG TGTTGAGCACTTGGTGGATTTCACAACATTGAAGAATGATCATGATTCCACAAGCATGTCAATG GTTGATCATCATGAAATCAATCCTCGTGATTTTTTCATTCCCACCCAAGAGAATTGGTTGCTGG TAACAGCTGATTACTCACAGATCGAGCTGCGTTTAATGGCTCATTTTTCTAAAGATACTGCATT GATTGAACTTCTAAGTAAACCAGATGGTGATGTATTTACTATGATTGCTTCAAGATGGACTGGT AAAGCGGAGTCCTTGATCTGTTCAAAGGAAAGAGAGACCACCAAAAGATTTATTTATGGCATCC TCTATGGAATGGGTGCCAACTCTCTAGCAGAACAACTTGAATGCAGCCCAGAAGATGCTGCACA GAAAATCCAAAGTTTTAAGAGGTTCTTTCCTGGTGTCTCTTCATGGCTACACGAAGCTGTGGCA TCATGTCGTCATAAAGG
Genomic sequence	GTGATTCTGGTTTACGCCGAATGCAATTGGGTATTGCCAAGAAGATAAAAAATGGAGCTCGAAA AATTGTTCTTGAGGAGGCAGAAGCAGCTAGAGTAGCAGCATTCTCAGCTTTCAAGTCACTTGGT GTACAAGTTCCTCAGTTTACTACACCTCTACTCCCAACTATCGATGAACCCCCAACTCGAGATA GCATGGTTTCTGTTGGCAGAGGTCAAGCTAGTGATGATACAAATAACTGCTTCAGTTATGGTTC TCAAAGGGCTTCTACAGAGAGAACTTTAGGGAACGATATGCACCCTGGTTCTTCCATACAAATA ACAGAGAGTGCAAGAATAGTGAATAATGCCAACATCGTTGTCCAAGTAGCATCACCTTTCTCCA TAGAAACTAAATTAAGCAGCAGAAATGTGGCTGACAAAGGCCCTGTTAATGCATATAATTTCCC AGGAGGGTTTGACAGTTTTCTTGATCAATGGTCTACTGTTAGTGAGTTTTCTTTTGATCTTCAT TATGTCAAGAAGTCAATTAAATCATCTTCAACCTATTTCGATATTCTTGGTTTGGCTGTCTGTT GGGAAAATTCACCTGTTTACTACTGCAACTTTCCGAAAGACCTAATGATGGCTGGTAGCAATGA CTCCATTGAAATGTGGGACGAACTAACGAGAAGATGGAACAGAGTAATCGAAATTATGCGACAA AACAGTGTCAAAAAAATGACCTGGAATTTAAAGTTCCAGATTCAAGCATTGAAGTATCCCTGTG TTTCTTGTCAACGGCTCTCTAGACTTCATCTTGACTACAAAATGTTGAAGAATGTTGAAGTCCT CGACAACTTGTATGTTTTCCTACAACCAGTTTCTGTCCACAGTGGATTGGACATATGCTTGGTG GCATGGGTTCTCTGGCCTGATGAGGAAAGTAAAACAGTGCCAAATCTTGAGAAGGTATAATATC TTATGCTGTGATATAGAACTCATGCTTGGTTTCCTCTTTAAATGTTTTCATGGCAATCTCTTTC AACCTTAACATTTCCCAATGATTTGTTAATTTTTTGACAGAAAAGATTTCTTAATTTTGATGCT GAGATATTTCAGAAAATGTACTTTATTTGTAATTTTTACCTGATATTAATTAATAGTTAGTGAA GAGACGACTACACAATGAAGCTGCAGCAGCTGCAAATCGAGATGGCAGATGGAGAAATCAGATG CACAAAGCAGCTCATAATGGTTGCTGTCGGCGTGCTGCACAGACACGGGCATTGTGTTCTGTTT TGAGGAAATTACTTGTTTCTCAAAATCTCAATGATTTACTCGAAACAATTGAGGGCCCATTGGT ACGTTCTACCCTTGCCAAAATGCAATATTGTCATCAAATGCTTTGACATTCACATTATATTTGT TGGGCAGGTAAATGTTCTTGCTGATATGGAACTTTGGGGAATTGGTGCTGACATGGATGCATGT CTCCGTGCGAGGCATATCATAATAAGAAAGCTGAAAGAACTAGAGAAAGAAGCTTATAAATTAG CTGGCAAGAGCTTCTCACTAAATGCAACTGCTGACATCGCTGACGTTCTTTATACACACTTAAA ACTGCCAGTTCCAAAAGGTTGTGGGAAAGGAAAATTGCATCCTAGCACTGACAAGCAGTCCTTG GACCATCTAAGGTATAAATTTGATCTATTTGTTGTGTGTGTCATTTCTAGGCATTGCAAATTTA TTATATTAGCAAGTGTTTTTTTTTCCTTTCAATGTGCCAGTCACAAACTTTTCATGATTCAAGC ATTTTTGAAATTTAAAATGTATTTCCTTGTATATCTAGTCTCAACAATGGTTCACTGACATAAT GTCTTCATGTTGTATTATGTCTGGATTGAAGTATCCTTGTGTCCATTCTAGTTTCTGCATGTTG AAGATGTCATTACGGTGTTGTCTTGATCTAAGCTGGAATTATTGGGGTGCCATCACATTTTATT ATTATGTCTGATTACAGTATGTTTCAAGAGTTGCATGTCATGTTTGGCTTGGTGCTTCAAAGAA TTATAGTAAAGTGAGGGTCAGGGAAGGAAGAAAATAATTCTTACGCCTTTCAGAATGTCATGGC AATGCTGGCTCAGAATTTGTTGAACATGCCAATGAGTTGGCCAGGGAAACTTTATTACAAGTAG TGCTGTAATCTGTATATTCTTTTGATGCTTCACTCAACCCTCACGTAATTTTTTGCAAGTTTCC CAAGGAAAGTGTTTGCACTGGTAACAATAAGATTTCAGTAAATGTGGAGAATTGCTCTTGTTGA ACTTCTAACTTAGATCATCACTCCGTCTAATAGTCTTTTGCTCTGTTTATTCAGGGATTGACAT GTATTTAGAGATGCTTTGGTTTTGTTCATTTTTAATACAGTGTCATATTATTATGCTCTTTTTA TTCAGGGATCAACATCCAATTATATCTGTAATTAAGGAACATAGAACATTGGCAAAACTGTTAA ATGGCACCTTGGGGTCCATTTGCTCACGGGCTCAGTTGTGCAGCAAATCACAAAGATACATCAT ACAAGGAAATTGGCTCCAGACATCAACTGCCACTGGCCGTCTATCAATGGAAGAACCAAATCTG CAGGTTATGTTACATTATTGCTAGTGTTTTGTATAATATGATTATATTCATAGGTCATAGCAAT GATTGACTGCATTTTTTCCTTAGAAAAAAAACTGACTGAACTATAATTTGTAGTGTGTTGAGCA CTTGGTGGATTTCACAACATTGAAGAATGATCATGATTCCACAAGCATGTCAATGGTTGATCAT CATGAAATCAATCCTCGTGATTTTTTCATTCCCACCCAAGTATTGCTCACTCAACAATTGTTTC ATGCTGTATATATTTTCCTATCGCAAGTAAGGTAATTTTGTGGTCTCCTTTTTGCTAGGAGAAT TGGTTGCTGGTAACAGCTGATTACTCACAGATCGAGCTGCGTTTAATGGCTCATTTTTCTAAAG ATACTGCATTGATTGAACTTCTAAGTAAACCAGATGGTGATGTATTTACTATGATTGCTTCAAG ATGGACTGGTAAAGCGGAGTCCTTGATCTGTTCAAAGGAAAGAGAGACCACCAAAAGATTTATT TATGGCATCCTCTATGGAATGGGTGCCAACTCTCTAGCAGAACAACTTGAATGCAGCCCAGAAG ATGCTGCACAGAAAATCCAAAGTTTTAAGAGGTTCTTTCCTGGTGTCTCTTCATGGCTACACGA AGCTGTGGCATCATGTCGTCATAAAGG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.241695799

Conservation Information
Conserved circRNAs	NA
PMCS	0.241695799

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							11257061-11253860(+)
11253881-11253860(+)
						
					

						Potential amino acid sequence
						
							MLHRKSKVLRGSFLVSLHGYTKLWHHVVIKGDSGLRRMQLGIAKKIKNGARKIVLEEAEAARVA
AFSAFKSLGVQVPQFTTPLLPTIDEPPTRDSMVSVGRGQASDDTNNCFSYGSQRASTERTLGND
MHPGSSIQITESARIVNNANIVVQVASPFSIETKLSSRNVADKGPVNAYNFPGGFDSFLDQWST
VSEFSFDLHYVKKSIKSSSTYFDILGLAVCWENSPVYYCNFPKDLMMAGSNDSIEMWDELTRRW
NRVIEIMRQNSVKKMTWNLKFQIQALKYPCVSCQRLSRLHLDYKMLKNVEVLDNLYVFLQPVSV
HSGLDICLVAWVLWPDEESKTVPNLEKLVKRRLHNEAAAAANRDGRWRNQMHKAAHNGCCRRAA
QTRALCSVLRKLLVSQNLNDLLETIEGPLVNVLADMELWGIGADMDACLRARHIIIRKLKELEK
EAYKLAGKSFSLNATADIADVLYTHLKLPVPKGCGKGKLHPSTDKQSLDHLRDQHPIISVIKEH
RTLAKLLNGTLGSICSRAQLCSKSQRYIIQGNWLQTSTATGRLSMEEPNLQCVEHLVDFTTLKN
DHDSTSMSMVDHHEINPRDFFIPTQENWLLVTADYSQIELRLMAHFSKDTALIELLSKPDGDVF
TMIASRWTGKAESLICSKERETTKRFIYGILYGMGANSLAEQLECSPEDAAQKIQSFKRFFPGV
SSWLHEAVASCRHKG*(+)
MQLGIAKKIKNGARKIVLEEAEAARVAAFSAFKSLGVQVPQFTTPLLPTIDEPPTRDSMVSVGR
GQASDDTNNCFSYGSQRASTERTLGNDMHPGSSIQITESARIVNNANIVVQVASPFSIETKLSS
RNVADKGPVNAYNFPGGFDSFLDQWSTVSEFSFDLHYVKKSIKSSSTYFDILGLAVCWENSPVY
YCNFPKDLMMAGSNDSIEMWDELTRRWNRVIEIMRQNSVKKMTWNLKFQIQALKYPCVSCQRLS
RLHLDYKMLKNVEVLDNLYVFLQPVSVHSGLDICLVAWVLWPDEESKTVPNLEKLVKRRLHNEA
AAAANRDGRWRNQMHKAAHNGCCRRAAQTRALCSVLRKLLVSQNLNDLLETIEGPLVNVLADME
LWGIGADMDACLRARHIIIRKLKELEKEAYKLAGKSFSLNATADIADVLYTHLKLPVPKGCGKG
KLHPSTDKQSLDHLRDQHPIISVIKEHRTLAKLLNGTLGSICSRAQLCSKSQRYIIQGNWLQTS
TATGRLSMEEPNLQCVEHLVDFTTLKNDHDSTSMSMVDHHEINPRDFFIPTQENWLLVTADYSQ
IELRLMAHFSKDTALIELLSKPDGDVFTMIASRWTGKAESLICSKERETTKRFIYGILYGMGAN
SLAEQLECSPEDAAQKIQSFKRFFPGVSSWLHEAVASCRHKG*(+)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	11257061-11253860(+) 11253881-11253860(+)
Potential amino acid sequence	MLHRKSKVLRGSFLVSLHGYTKLWHHVVIKGDSGLRRMQLGIAKKIKNGARKIVLEEAEAARVA AFSAFKSLGVQVPQFTTPLLPTIDEPPTRDSMVSVGRGQASDDTNNCFSYGSQRASTERTLGND MHPGSSIQITESARIVNNANIVVQVASPFSIETKLSSRNVADKGPVNAYNFPGGFDSFLDQWST VSEFSFDLHYVKKSIKSSSTYFDILGLAVCWENSPVYYCNFPKDLMMAGSNDSIEMWDELTRRW NRVIEIMRQNSVKKMTWNLKFQIQALKYPCVSCQRLSRLHLDYKMLKNVEVLDNLYVFLQPVSV HSGLDICLVAWVLWPDEESKTVPNLEKLVKRRLHNEAAAAANRDGRWRNQMHKAAHNGCCRRAA QTRALCSVLRKLLVSQNLNDLLETIEGPLVNVLADMELWGIGADMDACLRARHIIIRKLKELEK EAYKLAGKSFSLNATADIADVLYTHLKLPVPKGCGKGKLHPSTDKQSLDHLRDQHPIISVIKEH RTLAKLLNGTLGSICSRAQLCSKSQRYIIQGNWLQTSTATGRLSMEEPNLQCVEHLVDFTTLKN DHDSTSMSMVDHHEINPRDFFIPTQENWLLVTADYSQIELRLMAHFSKDTALIELLSKPDGDVF TMIASRWTGKAESLICSKERETTKRFIYGILYGMGANSLAEQLECSPEDAAQKIQSFKRFFPGV SSWLHEAVASCRHKG(+) MQLGIAKKIKNGARKIVLEEAEAARVAAFSAFKSLGVQVPQFTTPLLPTIDEPPTRDSMVSVGR GQASDDTNNCFSYGSQRASTERTLGNDMHPGSSIQITESARIVNNANIVVQVASPFSIETKLSS RNVADKGPVNAYNFPGGFDSFLDQWSTVSEFSFDLHYVKKSIKSSSTYFDILGLAVCWENSPVY YCNFPKDLMMAGSNDSIEMWDELTRRWNRVIEIMRQNSVKKMTWNLKFQIQALKYPCVSCQRLS RLHLDYKMLKNVEVLDNLYVFLQPVSVHSGLDICLVAWVLWPDEESKTVPNLEKLVKRRLHNEA AAAANRDGRWRNQMHKAAHNGCCRRAAQTRALCSVLRKLLVSQNLNDLLETIEGPLVNVLADME LWGIGADMDACLRARHIIIRKLKELEKEAYKLAGKSFSLNATADIADVLYTHLKLPVPKGCGKG KLHPSTDKQSLDHLRDQHPIISVIKEHRTLAKLLNGTLGSICSRAQLCSKSQRYIIQGNWLQTS TATGRLSMEEPNLQCVEHLVDFTTLKNDHDSTSMSMVDHHEINPRDFFIPTQENWLLVTADYSQ IELRLMAHFSKDTALIELLSKPDGDVFTMIASRWTGKAESLICSKERETTKRFIYGILYGMGAN SLAEQLECSPEDAAQKIQSFKRFFPGVSSWLHEAVASCRHKG(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os12g0291000_circ_g.3

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