Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G13460_circ_g.1 |
ID in PlantcircBase | ath_circ_002405 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr1: 4616428-4617667 JBrowse» |
Reference genome | TAIR10.38 |
Type | ue-circRNA |
Identification method | KNIFE, PcircRNA_finder |
Parent gene | AT1G13460 |
Parent gene annotation |
Serine/threonine protein phosphatase 2A 57 kDa regulatory subuni t B' theta isoform |
Parent gene strand | + |
Alternative splicing | NA |
Support reads | 2 |
Tissues | leaf |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | AT1G13460.1:1 AT1G13460.2:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.318143709 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |