Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os06g0131300_circ_g.4 |
ID in PlantcircBase | osa_circ_029535 |
Alias | NA |
Organism | Oryza sativa |
Position | chr6: 1675804-1675925 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | e-circRNA |
Identification method | circseq_cup |
Parent gene | Os06g0131300 |
Parent gene annotation |
Arginine decarboxylase, Chilling stress response (Os06t0131300-0 1) |
Parent gene strand | - |
Alternative splicing | Os06g0131300_circ_g.2 Os06g0131300_circ_g.3 Os06g0131300_circ_g.5 Os06g0131300_circ_g.6 |
Support reads | 2 |
Tissues | root |
Exon boundary | No-No |
Splicing signals | AC-GC |
Number of exons covered | Os06t0131350-00:1 Os06t0131300-01:1 Os06t0131350-00:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.419805669 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2016 |