Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d039160_circ_g.1 |
ID in PlantcircBase | zma_circ_009192 |
Alias | zma_circ_0002440 |
Organism | Zea mays |
Position | chr6: 171405451-171406719 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d039160 |
Parent gene annotation |
TATA-binding protein-associated factor BTAF1 |
Parent gene strand | - |
Alternative splicing | NA |
Support reads | NA |
Tissues | leaf, root |
Exon boundary | No-No |
Splicing signals | GT-AG |
Number of exons covered | Zm00001d039160_T012:6 Zm00001d039160_T027:6 Zm00001d039160_T005:6 Zm00001d039160_T014:6 Zm00001d039160_T016:6 Zm00001d039160_T021:6 Zm00001d039160_T009:6 Zm00001d039160_T020:6 Zm00001d039160_T010:3 Zm00001d039160_T034:6 Zm00001d039160_T023:6 Zm00001d039160_T026:6 Zm00001d039160_T019:6 Zm00001d039160_T022:6 Zm00001d039160_T008:6 Zm00001d039160_T006:6 Zm00001d039160_T028:6 Zm00001d039160_T018:6 Zm00001d039160_T004:6 Zm00001d039160_T033:6 Zm00001d039160_T032:6 Zm00001d039160_T031:6 Zm00001d039160_T029:6 Zm00001d039160_T024:6 Zm00001d039160_T002:6 Zm00001d039160_T030:6 Zm00001d039160_T011:6 Zm00001d039160_T017:6 Zm00001d039160_T025:6 Zm00001d039160_T003:6 Zm00001d039160_T015:6 Zm00001d039160_T035:6 Zm00001d039160_T007:6 Zm00001d039160_T013:6 Zm00001d039160_T001:6 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.164244727 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ma et al., 2021b |