Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G15215_circ_g.1 |
ID in PlantcircBase | ath_circ_002652 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr1: 5239293-5239648 JBrowse» |
Reference genome | TAIR10.38 |
Type | ei-circRNA |
Identification method | PcircRNA_finder |
Parent gene | AT1G15215 |
Parent gene annotation |
SAWADEE HOMEODOMAIN protein |
Parent gene strand | + |
Alternative splicing | AT1G15215_circ_g.2 AT1G15215_circ_g.3 |
Support reads | 1 |
Tissues | aerial |
Exon boundary | No-No |
Splicing signals | AG-AC |
Number of exons covered | AT1G15215.4:2 AT1G15215.3:2 AT1G15215.2:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.607840577 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |