circRNA
Detailed infomation of each circRNA
Detail information of Csa1G021900_circ_g.1
| General Information | |
|---|---|
| CircRNA Name | Csa1G021900_circ_g.1 |
| ID in PlantcircBase | csa_circ_000079 |
| Alias | Chr1:2248761_2253344 |
| Organism | Cucumis sativus |
| Position | chrChr1: 2248761-2253344 JBrowse» |
| Reference genome | Cucumis sativus v1.5 |
| Type | ei-circRNA |
| Identification method | CIRI2 |
| Parent gene | Csa1G021900 |
| Parent gene annotation | NA |
| Parent gene strand | + |
| Alternative splicing | NA |
| Support reads | NA |
| Tissues | leaf,root |
| Exon boundary | Yes-No |
| Splicing signals | GT-AG |
| Number of exons covered | Csa1G021900.1:5 |
| Conservation Information | |
|---|---|
| Conserved circRNAs | NA |
| PMCS | 0.047938809 |
| Functional Information | |
|---|---|
| Coding potential | N |
| Potential coding position |
NA |
| Potential amino acid sequence |
NA |
| Sponge-miRNAs | NA |
| circRNA-miRNA-mRNA network | VISUALIZATION |
| Potential function description | responsive to salt stress in root |
| Other Information | |
|---|---|
| References | Zhu et al., 2019 |
